| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310080
Identifier: 18310080
GI number: 18310080
Start: 1300712
End: 1301176
Strand: Direct
Name: 18310080
Synonym: CPE1098
Alternate gene names: NA
Gene position: 1300712-1301176 (Clockwise)
Preceding gene: 18310078
Following gene: 18310081
Centisome position: 42.91
GC content: 24.73
Gene sequence:
>465_bases ATGAATATTAAAGTAGGAGATAGGTTAATAACTACTAGAAATTTTTTAAAACATGGCGAGGTAGGAATAGTTACAGACAT ATACAAAGATGAACATAAGCAAACTAGAGTAATAGTTAAAATTGGCTTAATGAATTTAACATTATATGATTATGAACTAG ATTATTACTTTGTTAAAACTAATAATCAAATAGTTTTTATGAATGTATCTACAGTAAAAGATTTTTTAGAATCAAATAAA GTTAGTAGCCTAGCAAAAATTTCTGAAAATGGAGCAACAGTAATTTCTACAATTATAAATCCAAAAGAGTTATTAGATAC TTTGCTACAAGATAAGGATATAGAAGAAAGAAGTATATGCTGGACAGAATTAACTACTCTTAAGCATGGTATTAATATGC ACCTAAAAATATTAAAAGATTTAGAGAAAAGTTATAATACAGAATATGTAATGCACATAAATTAA
Upstream 100 bases:
>100_bases ATAAGGGTTTACAACAACGAATAACGGTGCTATAATTATAAATGTAGACAGAAGTTTACAAAAAATAAACAAATTGTATA TAATATAAAGGGGTGAAAAA
Downstream 100 bases:
>100_bases AGTATATAAAAGGGAGAGAAAACAATGAAAGCAATAGAATTAAATACTTACGATGGGATATTTATAGATCCAAAGGAATT CTTTAACAAGACAAAGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNIKVGDRLITTRNFLKHGEVGIVTDIYKDEHKQTRVIVKIGLMNLTLYDYELDYYFVKTNNQIVFMNVSTVKDFLESNK VSSLAKISENGATVISTIINPKELLDTLLQDKDIEERSICWTELTTLKHGINMHLKILKDLEKSYNTEYVMHIN
Sequences:
>Translated_154_residues MNIKVGDRLITTRNFLKHGEVGIVTDIYKDEHKQTRVIVKIGLMNLTLYDYELDYYFVKTNNQIVFMNVSTVKDFLESNK VSSLAKISENGATVISTIINPKELLDTLLQDKDIEERSICWTELTTLKHGINMHLKILKDLEKSYNTEYVMHIN >Mature_154_residues MNIKVGDRLITTRNFLKHGEVGIVTDIYKDEHKQTRVIVKIGLMNLTLYDYELDYYFVKTNNQIVFMNVSTVKDFLESNK VSSLAKISENGATVISTIINPKELLDTLLQDKDIEERSICWTELTTLKHGINMHLKILKDLEKSYNTEYVMHIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17870; Mature: 17870
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKVGDRLITTRNFLKHGEVGIVTDIYKDEHKQTRVIVKIGLMNLTLYDYELDYYFVKT CCCCCCCEEEHHHHHHHCCCCEEEEHHHHCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEE NNQIVFMNVSTVKDFLESNKVSSLAKISENGATVISTIINPKELLDTLLQDKDIEERSIC CCEEEEEEHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHH WTELTTLKHGINMHLKILKDLEKSYNTEYVMHIN HHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure MNIKVGDRLITTRNFLKHGEVGIVTDIYKDEHKQTRVIVKIGLMNLTLYDYELDYYFVKT CCCCCCCEEEHHHHHHHCCCCEEEEHHHHCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEE NNQIVFMNVSTVKDFLESNKVSSLAKISENGATVISTIINPKELLDTLLQDKDIEERSIC CCEEEEEEHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHH WTELTTLKHGINMHLKILKDLEKSYNTEYVMHIN HHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA