Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310070

Identifier: 18310070

GI number: 18310070

Start: 1290802

End: 1291374

Strand: Direct

Name: 18310070

Synonym: CPE1088

Alternate gene names: NA

Gene position: 1290802-1291374 (Clockwise)

Preceding gene: 18310068

Following gene: 18310071

Centisome position: 42.58

GC content: 26.18

Gene sequence:

>573_bases
ATGGAAAATAAAATTAGCTTAGTATATGAAAATGGAGAATTTACTGTCTACATAAATGATGAAGTAGTTACAGTTAATAA
ATATATGGATAATGCAATAGAGAAATTTACTCAAACAGTGCATAATAACGCTACACCAAAATCAATTAAGTGGGAAAGTA
TTGAAGAGGATTTAAAAGGAATTGATTTAAAAGATTTAGAGATAAATAGTGAATTTAAAACATTAACTTATAAGGATATG
AAGTATTTCTACAGTACAGATAAAATCTTTAATATGCATGGTGGAAGAATGCAACAATTATTAGGAGGATATCAATTATT
CTCATTTATAGTTAAGATGATTTCTGAAAAACATTTAGAAGATTATTTAGAAGTTTTAAACTTTTGTGAAGATATCTTAA
GATGTAAGGTTACATACAGAACTCCAGGAAGTAACTTTATAGTTGGCAGCCCAGCTTTTAACTATGGATCAGCATCATAT
GATTTTGCTACTGGAAAAGTTAATAAGGGAGCTTCAATAGAAAAGATGTCTTTTGAAGATTTTAAAAAATATATATTTGA
TATAATAAAATAA

Upstream 100 bases:

>100_bases
AGAAAATCTTATTTAGGAGTTAGCAAATATTTTAATATGGACAAATTTAGCTTATTATTATATAATAATTATTATTAATT
AAAGAATGGAGTGCTTTTTT

Downstream 100 bases:

>100_bases
CCTTTGGTATTCCAAAGGTTATTTTTTATTTCAACATAATTTTACAATTTGTATATAAAATGATAAAATTATTTAAATAA
AAGATGGAGGATTATGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MENKISLVYENGEFTVYINDEVVTVNKYMDNAIEKFTQTVHNNATPKSIKWESIEEDLKGIDLKDLEINSEFKTLTYKDM
KYFYSTDKIFNMHGGRMQQLLGGYQLFSFIVKMISEKHLEDYLEVLNFCEDILRCKVTYRTPGSNFIVGSPAFNYGSASY
DFATGKVNKGASIEKMSFEDFKKYIFDIIK

Sequences:

>Translated_190_residues
MENKISLVYENGEFTVYINDEVVTVNKYMDNAIEKFTQTVHNNATPKSIKWESIEEDLKGIDLKDLEINSEFKTLTYKDM
KYFYSTDKIFNMHGGRMQQLLGGYQLFSFIVKMISEKHLEDYLEVLNFCEDILRCKVTYRTPGSNFIVGSPAFNYGSASY
DFATGKVNKGASIEKMSFEDFKKYIFDIIK
>Mature_190_residues
MENKISLVYENGEFTVYINDEVVTVNKYMDNAIEKFTQTVHNNATPKSIKWESIEEDLKGIDLKDLEINSEFKTLTYKDM
KYFYSTDKIFNMHGGRMQQLLGGYQLFSFIVKMISEKHLEDYLEVLNFCEDILRCKVTYRTPGSNFIVGSPAFNYGSASY
DFATGKVNKGASIEKMSFEDFKKYIFDIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22082; Mature: 22082

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKISLVYENGEFTVYINDEVVTVNKYMDNAIEKFTQTVHNNATPKSIKWESIEEDLKG
CCCCEEEEEECCEEEEEECCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
IDLKDLEINSEFKTLTYKDMKYFYSTDKIFNMHGGRMQQLLGGYQLFSFIVKMISEKHLE
CCCEEEEECCCHHEEEHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DYLEVLNFCEDILRCKVTYRTPGSNFIVGSPAFNYGSASYDFATGKVNKGASIEKMSFED
HHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCHHH
FKKYIFDIIK
HHHHHHHHCC
>Mature Secondary Structure
MENKISLVYENGEFTVYINDEVVTVNKYMDNAIEKFTQTVHNNATPKSIKWESIEEDLKG
CCCCEEEEEECCEEEEEECCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
IDLKDLEINSEFKTLTYKDMKYFYSTDKIFNMHGGRMQQLLGGYQLFSFIVKMISEKHLE
CCCEEEEECCCHHEEEHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DYLEVLNFCEDILRCKVTYRTPGSNFIVGSPAFNYGSASYDFATGKVNKGASIEKMSFED
HHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCHHH
FKKYIFDIIK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA