| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310049
Identifier: 18310049
GI number: 18310049
Start: 1273892
End: 1274356
Strand: Direct
Name: 18310049
Synonym: CPE1067
Alternate gene names: NA
Gene position: 1273892-1274356 (Clockwise)
Preceding gene: 18310048
Following gene: 18310050
Centisome position: 42.02
GC content: 27.74
Gene sequence:
>465_bases ATGAAGGAAAGTGAATTAGTATTAAATAATATTTTAGTGAAATTATTCAATAATATTTTGAGAATAGAGGAATTTGCATT AAAGAGTGCACCATTTAATGATTTATCTATAACAGAAATGCATACTATAGAGGCCATAGGGATAGAAAAAGCAAGAACAA TGTCAGAAGTGGCATTAGATTTAAAAATAACAGTAGGTACTTTAACAACTGCTATAAACAAACTAATAAAAAAAGGATAT GTAAATAGAAGAAGAATAGAAGAAGATAGAAGAGTTGTTATGATAGAACTTACAGAGAAAGGAACTCTAGCTTATAAAGT ACATGAAAAATTTCATGAAGAAATGATAGATCATGTTTTAGAGGAACTAGGTGTTGGTGAAGAGGAGGTTTTAATAAGTT CTCTAGATAAGTTAGATAAGTTCTTTCAAAAGAAATTAGAACTTATGAAATCAAAGGAGAGTTAA
Upstream 100 bases:
>100_bases ATTTAGTATAGTATATTTTGAATATCAAAATATTTGGTTTGATATTCAAAATATTTGAATTTTATATCTAATGATTTTGA AGTAAGGGAGCGATTTTAGG
Downstream 100 bases:
>100_bases TATGAAAAATGCTAAAATGATAGGCTTTGGCTTATATACACCTAAAAATTTAGTGGAAAATGAAAGATTACAAGAATTTT TAGAGACTAGCGATGAGTGG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator BlaI/MecI/CopY Family; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALDLKITVGTLTTAINKLIKKGY VNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVLEELGVGEEEVLISSLDKLDKFFQKKLELMKSKES
Sequences:
>Translated_154_residues MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALDLKITVGTLTTAINKLIKKGY VNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVLEELGVGEEEVLISSLDKLDKFFQKKLELMKSKES >Mature_154_residues MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALDLKITVGTLTTAINKLIKKGY VNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVLEELGVGEEEVLISSLDKLDKFFQKKLELMKSKES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17775; Mature: 17775
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKITVGTLTTAINKLIKKGYVNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVL HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH EELGVGEEEVLISSLDKLDKFFQKKLELMKSKES HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKITVGTLTTAINKLIKKGYVNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVL HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH EELGVGEEEVLISSLDKLDKFFQKKLELMKSKES HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA