Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310049

Identifier: 18310049

GI number: 18310049

Start: 1273892

End: 1274356

Strand: Direct

Name: 18310049

Synonym: CPE1067

Alternate gene names: NA

Gene position: 1273892-1274356 (Clockwise)

Preceding gene: 18310048

Following gene: 18310050

Centisome position: 42.02

GC content: 27.74

Gene sequence:

>465_bases
ATGAAGGAAAGTGAATTAGTATTAAATAATATTTTAGTGAAATTATTCAATAATATTTTGAGAATAGAGGAATTTGCATT
AAAGAGTGCACCATTTAATGATTTATCTATAACAGAAATGCATACTATAGAGGCCATAGGGATAGAAAAAGCAAGAACAA
TGTCAGAAGTGGCATTAGATTTAAAAATAACAGTAGGTACTTTAACAACTGCTATAAACAAACTAATAAAAAAAGGATAT
GTAAATAGAAGAAGAATAGAAGAAGATAGAAGAGTTGTTATGATAGAACTTACAGAGAAAGGAACTCTAGCTTATAAAGT
ACATGAAAAATTTCATGAAGAAATGATAGATCATGTTTTAGAGGAACTAGGTGTTGGTGAAGAGGAGGTTTTAATAAGTT
CTCTAGATAAGTTAGATAAGTTCTTTCAAAAGAAATTAGAACTTATGAAATCAAAGGAGAGTTAA

Upstream 100 bases:

>100_bases
ATTTAGTATAGTATATTTTGAATATCAAAATATTTGGTTTGATATTCAAAATATTTGAATTTTATATCTAATGATTTTGA
AGTAAGGGAGCGATTTTAGG

Downstream 100 bases:

>100_bases
TATGAAAAATGCTAAAATGATAGGCTTTGGCTTATATACACCTAAAAATTTAGTGGAAAATGAAAGATTACAAGAATTTT
TAGAGACTAGCGATGAGTGG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator BlaI/MecI/CopY Family; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALDLKITVGTLTTAINKLIKKGY
VNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVLEELGVGEEEVLISSLDKLDKFFQKKLELMKSKES

Sequences:

>Translated_154_residues
MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALDLKITVGTLTTAINKLIKKGY
VNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVLEELGVGEEEVLISSLDKLDKFFQKKLELMKSKES
>Mature_154_residues
MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALDLKITVGTLTTAINKLIKKGY
VNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVLEELGVGEEEVLISSLDKLDKFFQKKLELMKSKES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17775; Mature: 17775

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKITVGTLTTAINKLIKKGYVNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVL
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
EELGVGEEEVLISSLDKLDKFFQKKLELMKSKES
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKESELVLNNILVKLFNNILRIEEFALKSAPFNDLSITEMHTIEAIGIEKARTMSEVALD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKITVGTLTTAINKLIKKGYVNRRRIEEDRRVVMIELTEKGTLAYKVHEKFHEEMIDHVL
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
EELGVGEEEVLISSLDKLDKFFQKKLELMKSKES
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA