| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310036
Identifier: 18310036
GI number: 18310036
Start: 1260786
End: 1261025
Strand: Direct
Name: 18310036
Synonym: CPE1054
Alternate gene names: NA
Gene position: 1260786-1261025 (Clockwise)
Preceding gene: 18310035
Following gene: 18310037
Centisome position: 41.59
GC content: 25.83
Gene sequence:
>240_bases ATGAATGATAATCAAGTAGTATCTTTTAGAGATGAAAATGGAAAAAAGATTGAATATCTGGTTTTAGAACAAAAATTAAT TTGTGGTGCAGAATATGTAGCAATGGCACCTAAAAATGATAAGACTCATGTGGAACTATTTAAGATTAATTTTGATAAAG ATTGGAATGAAACTTTAGATTCTGTAGAATCTGAAAAGGAAATAAATATGTTTAAGCAAGTGTCTAATTTGAAATTTTAA
Upstream 100 bases:
>100_bases TATATAATATACTCGTAAATGAGTATTAAATTAAAAAAGAATAAATAAAAAAATATATAAAATAATAAATAAGAAAGAAA ATTTAAAGGAGGAAATAAAA
Downstream 100 bases:
>100_bases TAATTTATATTTAATTTAAAATAAGTACATATAAATTAGAATTTGTCACTATAAAACATATCTATATAAATATTATAATT GTTTTAGGCTCTGTTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MNDNQVVSFRDENGKKIEYLVLEQKLICGAEYVAMAPKNDKTHVELFKINFDKDWNETLDSVESEKEINMFKQVSNLKF
Sequences:
>Translated_79_residues MNDNQVVSFRDENGKKIEYLVLEQKLICGAEYVAMAPKNDKTHVELFKINFDKDWNETLDSVESEKEINMFKQVSNLKF >Mature_79_residues MNDNQVVSFRDENGKKIEYLVLEQKLICGAEYVAMAPKNDKTHVELFKINFDKDWNETLDSVESEKEINMFKQVSNLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9289; Mature: 9289
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNQVVSFRDENGKKIEYLVLEQKLICGAEYVAMAPKNDKTHVELFKINFDKDWNETLD CCCCCEEEEECCCCCEEEEEEEECHHHCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHH SVESEKEINMFKQVSNLKF HHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MNDNQVVSFRDENGKKIEYLVLEQKLICGAEYVAMAPKNDKTHVELFKINFDKDWNETLD CCCCCEEEEECCCCCEEEEEEEECHHHCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHH SVESEKEINMFKQVSNLKF HHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA