| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is pykA [H]
Identifier: 18310007
GI number: 18310007
Start: 1226692
End: 1227786
Strand: Direct
Name: pykA [H]
Synonym: CPE1025
Alternate gene names: 18310007
Gene position: 1226692-1227786 (Clockwise)
Preceding gene: 18310006
Following gene: 18310009
Centisome position: 40.47
GC content: 26.48
Gene sequence:
>1095_bases ATGGGGGAAGTTATGGATATTATAGGCAGTATAAACACCAGATTTTTAAGTAAAAGTGAACAGAGCAAAAAGGAAATTTT TAATAAAATAGATAACATAGTAAAAGGTGGGGGAAATATAATTAGGATGAATCTATCCCATGGCAAGCATAGAGATGTAG AATGCTGTATAGATTACATAAGAAGCAATCATAAGAATGTAAAAATTCTTTTAGACTTACAGGGAAATAAGATTAGGGTA GCTAATAATATATATGGAACATTTAAAGTTAATTCTGGTGATTTAGTTTATTTTTGTTCAGAGGAAACTTATGATGCTTA TCTTAAAAATATTGATAGAAATAAACTTATACCTTTAAATATAAAAAATAAGTTTATATACAATAATACTTTTAAAAAGA TATACATGAAAGACGCCACTATGGAATTTATAGTAATAAGCAATAACAATGGGTTAATAAAGACTAAGGTTAAATTAGGT GGTGTAGTTAGAAAAGAAAAGGGATGTAATCTTCCTAATTTAGATAGGAAAAATTGGGGGGTAAGCGAAAAGGATTTAGA AGATATTAAATTTGCCATAGATAATAAAGTAGATATTATAGATTATTCTTATTGTTCTTATATGGAAGAATGTAGAGAAT TTAAAAATATTGTTTTTAAAAATTTAAAGTCAAATCAATTTATTCCTAAGCTTTGGGGAAAAATTGAGACTAATGAAGGA ATAAATAATATTAAAGAAGTTGCTAAGGAATTAGATGGAATAGTTATAGCAAGGGGAGATTTAACAGCAGAAATTGGAAT ATTAAATGTTCCTATAGTGCAAGAAAAAATATTATATGCTTTAAAAAATGAGAATAAATCAATAATAGTAGCCACAAATG TACTTTCATCTATTAGAAATAAACAAAATAAGCCTACAATAAATGAATTAAGCGATATATATCATTTTATTAGGTGTGGC GCAACAGGGTTTATGCTTACTGGAGAAACTAGTACTGGGGAAAATGAAGAGTATGTGGTTACAACCTTAAAAAATAGTAT AAAATATTACGAAAAGTTATTATCAAAAATAAAAAAGAGATCAAAGAGAGTCTAA
Upstream 100 bases:
>100_bases TTAGTAATAAATATTATTCTGTTAGGTGTTTTAAATTTATACAATATATAAATAATATTTAAAATTCATTATGCATATAA ATCAATGAGTAGCAATATTT
Downstream 100 bases:
>100_bases AAAGACTTTCTTTGATCTTTTATTTTAGATTTTTGTATAAGTTCATAGGATTTTATAACTATTAAGAAGCTTAAATATCC TAGTAAAGCACCTGTTAATA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGEVMDIIGSINTRFLSKSEQSKKEIFNKIDNIVKGGGNIIRMNLSHGKHRDVECCIDYIRSNHKNVKILLDLQGNKIRV ANNIYGTFKVNSGDLVYFCSEETYDAYLKNIDRNKLIPLNIKNKFIYNNTFKKIYMKDATMEFIVISNNNGLIKTKVKLG GVVRKEKGCNLPNLDRKNWGVSEKDLEDIKFAIDNKVDIIDYSYCSYMEECREFKNIVFKNLKSNQFIPKLWGKIETNEG INNIKEVAKELDGIVIARGDLTAEIGILNVPIVQEKILYALKNENKSIIVATNVLSSIRNKQNKPTINELSDIYHFIRCG ATGFMLTGETSTGENEEYVVTTLKNSIKYYEKLLSKIKKRSKRV
Sequences:
>Translated_364_residues MGEVMDIIGSINTRFLSKSEQSKKEIFNKIDNIVKGGGNIIRMNLSHGKHRDVECCIDYIRSNHKNVKILLDLQGNKIRV ANNIYGTFKVNSGDLVYFCSEETYDAYLKNIDRNKLIPLNIKNKFIYNNTFKKIYMKDATMEFIVISNNNGLIKTKVKLG GVVRKEKGCNLPNLDRKNWGVSEKDLEDIKFAIDNKVDIIDYSYCSYMEECREFKNIVFKNLKSNQFIPKLWGKIETNEG INNIKEVAKELDGIVIARGDLTAEIGILNVPIVQEKILYALKNENKSIIVATNVLSSIRNKQNKPTINELSDIYHFIRCG ATGFMLTGETSTGENEEYVVTTLKNSIKYYEKLLSKIKKRSKRV >Mature_363_residues GEVMDIIGSINTRFLSKSEQSKKEIFNKIDNIVKGGGNIIRMNLSHGKHRDVECCIDYIRSNHKNVKILLDLQGNKIRVA NNIYGTFKVNSGDLVYFCSEETYDAYLKNIDRNKLIPLNIKNKFIYNNTFKKIYMKDATMEFIVISNNNGLIKTKVKLGG VVRKEKGCNLPNLDRKNWGVSEKDLEDIKFAIDNKVDIIDYSYCSYMEECREFKNIVFKNLKSNQFIPKLWGKIETNEGI NNIKEVAKELDGIVIARGDLTAEIGILNVPIVQEKILYALKNENKSIIVATNVLSSIRNKQNKPTINELSDIYHFIRCGA TGFMLTGETSTGENEEYVVTTLKNSIKYYEKLLSKIKKRSKRV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=353, Percent_Identity=27.7620396600567, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI33286420, Length=353, Percent_Identity=27.7620396600567, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI33286418, Length=351, Percent_Identity=27.6353276353276, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI32967597, Length=354, Percent_Identity=25.7062146892655, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI10835121, Length=354, Percent_Identity=25.7062146892655, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI310128732, Length=276, Percent_Identity=28.2608695652174, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI310128730, Length=276, Percent_Identity=28.2608695652174, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI310128736, Length=224, Percent_Identity=27.2321428571429, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI310128734, Length=224, Percent_Identity=27.2321428571429, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI310128738, Length=224, Percent_Identity=27.2321428571429, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1787965, Length=320, Percent_Identity=27.1875, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788160, Length=338, Percent_Identity=26.6272189349112, Blast_Score=96, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17544584, Length=346, Percent_Identity=27.7456647398844, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71984413, Length=330, Percent_Identity=29.6969696969697, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17506831, Length=330, Percent_Identity=29.6969696969697, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71984406, Length=330, Percent_Identity=29.6969696969697, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17506829, Length=330, Percent_Identity=29.6969696969697, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6319279, Length=328, Percent_Identity=29.8780487804878, Blast_Score=125, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6324923, Length=318, Percent_Identity=30.5031446540881, Blast_Score=119, Evalue=7e-28, Organism=Drosophila melanogaster, GI24648964, Length=340, Percent_Identity=27.3529411764706, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI28571814, Length=340, Percent_Identity=27.3529411764706, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24648966, Length=346, Percent_Identity=28.3236994219653, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24581235, Length=338, Percent_Identity=25.7396449704142, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI24646914, Length=187, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 41684; Mature: 41553
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVMDIIGSINTRFLSKSEQSKKEIFNKIDNIVKGGGNIIRMNLSHGKHRDVECCIDYI CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH RSNHKNVKILLDLQGNKIRVANNIYGTFKVNSGDLVYFCSEETYDAYLKNIDRNKLIPLN HCCCCCEEEEEEECCCEEEEEECEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCEEEEE IKNKFIYNNTFKKIYMKDATMEFIVISNNNGLIKTKVKLGGVVRKEKGCNLPNLDRKNWG CCCEEEECCCEEEEEEECCEEEEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCCC VSEKDLEDIKFAIDNKVDIIDYSYCSYMEECREFKNIVFKNLKSNQFIPKLWGKIETNEG CCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEECCCC INNIKEVAKELDGIVIARGDLTAEIGILNVPIVQEKILYALKNENKSIIVATNVLSSIRN HHHHHHHHHHHCCEEEECCCCEEEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHC KQNKPTINELSDIYHFIRCGATGFMLTGETSTGENEEYVVTTLKNSIKYYEKLLSKIKKR CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH SKRV HCCC >Mature Secondary Structure GEVMDIIGSINTRFLSKSEQSKKEIFNKIDNIVKGGGNIIRMNLSHGKHRDVECCIDYI CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH RSNHKNVKILLDLQGNKIRVANNIYGTFKVNSGDLVYFCSEETYDAYLKNIDRNKLIPLN HCCCCCEEEEEEECCCEEEEEECEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCEEEEE IKNKFIYNNTFKKIYMKDATMEFIVISNNNGLIKTKVKLGGVVRKEKGCNLPNLDRKNWG CCCEEEECCCEEEEEEECCEEEEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCCC VSEKDLEDIKFAIDNKVDIIDYSYCSYMEECREFKNIVFKNLKSNQFIPKLWGKIETNEG CCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEECCCC INNIKEVAKELDGIVIARGDLTAEIGILNVPIVQEKILYALKNENKSIIVATNVLSSIRN HHHHHHHHHHHCCEEEECCCCEEEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHC KQNKPTINELSDIYHFIRCGATGFMLTGETSTGENEEYVVTTLKNSIKYYEKLLSKIKKR CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH SKRV HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7549104 [H]