Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309984

Identifier: 18309984

GI number: 18309984

Start: 1207034

End: 1208056

Strand: Reverse

Name: 18309984

Synonym: CPE1002

Alternate gene names: NA

Gene position: 1208056-1207034 (Counterclockwise)

Preceding gene: 18309996

Following gene: 18309983

Centisome position: 39.85

GC content: 23.17

Gene sequence:

>1023_bases
ATGAGTAACAAAAAAATAAACTTTAAAAATATGAACAATTCAGATAAGGTTAAATTAATAAATAACTCTTTAGTTCTAGA
TGGAATTTCTCTTAAAGAGCTTTCAAAAAAAATAGATATACAAAAGAAAGATATAATAAAATTTATGAATGAAGAAGGTT
TTTTCTTTGATAGTACAGATGGTTATTTTAAAAAGGATAAAGAAGAATCTACTTCAATAGATATAAAACCTTCAGTTGAA
ACAAGTAAATCCTCCCTTCCTAAAACACCAGAACGTGAGGATGTTCAATCTATAATAGATTCTATAAATGAAAAATTAAA
CATAAAAGATATTGAAACTACTAATATATTATTACCTGAAATTAAAACATCTGAAAAAGTTAGTGTTACTAAGGAAGATA
ATTTAGAGGATAATACTAAAACTTCTCAAAGTATGACTTTAGAAATTCCTAGAGTATCTAGAACAGCTAGAAGAAAAAAG
AAGAAAAAGAAAACTCTAATTAAAAGAATGATTTCATATTTTAAAAATAGTTTTTCTAAAATATTTTTAATTAAAAAGAA
AGAAAATAAATCTTCTTCTAAGATAGAATGTAATGATAATTTTAATAAGAAAGAAGTCAACATAAAATCTACAAATAGTA
CTATATTAGAAGAAGTTGCTATAGAAAAACTTCCTGTGAATGATAAAATAGAAACAACTTCTCATGGTCTTAACAGTGAA
AGCAAGTTACCTTTTGAAATAAAAATACCTAAAAACTTTAAAGGTAGAAGAAGAATTCCTAAAGTAGATTGTGACTTAGA
TGAAATAAATTTTTTAAATTCAAATGACTATTCCTTAGAAGACTTAAAAAAAGACTTTAGAGATTTAAAACTTAATTCAG
ATTTTATAAAAAATATAAACTCTGATTCCTTAGAAAGTAATAGGGATAAATCTTTAGAAGAACGTGTATGTAACCTTGAA
AAGAAAATAAATGAACTTGAAGAATTTTTCTTAGAAATTTTTCAAGCAATGTCAAATAAATAA

Upstream 100 bases:

>100_bases
TCTTCGTTTTTATTTTATAATATTTTTAGAAACTTTTGTAATATGGCAAAGCTCACATTACTATTGACATAATTTATATT
TGTATTAAGGGTGAGAAATT

Downstream 100 bases:

>100_bases
TCACTAAAAAGTGGCTGTATCAAATATACTAATAAAACTTATTTTGATACATGCCCTTTTTTATTTTATTATTATAGAAA
TTCCTCTTTATACCTATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSNKKINFKNMNNSDKVKLINNSLVLDGISLKELSKKIDIQKKDIIKFMNEEGFFFDSTDGYFKKDKEESTSIDIKPSVE
TSKSSLPKTPEREDVQSIIDSINEKLNIKDIETTNILLPEIKTSEKVSVTKEDNLEDNTKTSQSMTLEIPRVSRTARRKK
KKKKTLIKRMISYFKNSFSKIFLIKKKENKSSSKIECNDNFNKKEVNIKSTNSTILEEVAIEKLPVNDKIETTSHGLNSE
SKLPFEIKIPKNFKGRRRIPKVDCDLDEINFLNSNDYSLEDLKKDFRDLKLNSDFIKNINSDSLESNRDKSLEERVCNLE
KKINELEEFFLEIFQAMSNK

Sequences:

>Translated_340_residues
MSNKKINFKNMNNSDKVKLINNSLVLDGISLKELSKKIDIQKKDIIKFMNEEGFFFDSTDGYFKKDKEESTSIDIKPSVE
TSKSSLPKTPEREDVQSIIDSINEKLNIKDIETTNILLPEIKTSEKVSVTKEDNLEDNTKTSQSMTLEIPRVSRTARRKK
KKKKTLIKRMISYFKNSFSKIFLIKKKENKSSSKIECNDNFNKKEVNIKSTNSTILEEVAIEKLPVNDKIETTSHGLNSE
SKLPFEIKIPKNFKGRRRIPKVDCDLDEINFLNSNDYSLEDLKKDFRDLKLNSDFIKNINSDSLESNRDKSLEERVCNLE
KKINELEEFFLEIFQAMSNK
>Mature_339_residues
SNKKINFKNMNNSDKVKLINNSLVLDGISLKELSKKIDIQKKDIIKFMNEEGFFFDSTDGYFKKDKEESTSIDIKPSVET
SKSSLPKTPEREDVQSIIDSINEKLNIKDIETTNILLPEIKTSEKVSVTKEDNLEDNTKTSQSMTLEIPRVSRTARRKKK
KKKTLIKRMISYFKNSFSKIFLIKKKENKSSSKIECNDNFNKKEVNIKSTNSTILEEVAIEKLPVNDKIETTSHGLNSES
KLPFEIKIPKNFKGRRRIPKVDCDLDEINFLNSNDYSLEDLKKDFRDLKLNSDFIKNINSDSLESNRDKSLEERVCNLEK
KINELEEFFLEIFQAMSNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39465; Mature: 39334

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKKINFKNMNNSDKVKLINNSLVLDGISLKELSKKIDIQKKDIIKFMNEEGFFFDSTD
CCCCCEEECCCCCCCCEEEECCEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCEEECCC
GYFKKDKEESTSIDIKPSVETSKSSLPKTPEREDVQSIIDSINEKLNIKDIETTNILLPE
CCCCCCCCCCCEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEEECCC
IKTSEKVSVTKEDNLEDNTKTSQSMTLEIPRVSRTARRKKKKKKTLIKRMISYFKNSFSK
CCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
IFLIKKKENKSSSKIECNDNFNKKEVNIKSTNSTILEEVAIEKLPVNDKIETTSHGLNSE
EEEEEECCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCC
SKLPFEIKIPKNFKGRRRIPKVDCDLDEINFLNSNDYSLEDLKKDFRDLKLNSDFIKNIN
CCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCC
SDSLESNRDKSLEERVCNLEKKINELEEFFLEIFQAMSNK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNKKINFKNMNNSDKVKLINNSLVLDGISLKELSKKIDIQKKDIIKFMNEEGFFFDSTD
CCCCEEECCCCCCCCEEEECCEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCEEECCC
GYFKKDKEESTSIDIKPSVETSKSSLPKTPEREDVQSIIDSINEKLNIKDIETTNILLPE
CCCCCCCCCCCEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEEECCC
IKTSEKVSVTKEDNLEDNTKTSQSMTLEIPRVSRTARRKKKKKKTLIKRMISYFKNSFSK
CCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
IFLIKKKENKSSSKIECNDNFNKKEVNIKSTNSTILEEVAIEKLPVNDKIETTSHGLNSE
EEEEEECCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCC
SKLPFEIKIPKNFKGRRRIPKVDCDLDEINFLNSNDYSLEDLKKDFRDLKLNSDFIKNIN
CCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCC
SDSLESNRDKSLEERVCNLEKKINELEEFFLEIFQAMSNK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA