Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309932

Identifier: 18309932

GI number: 18309932

Start: 1148633

End: 1149385

Strand: Direct

Name: 18309932

Synonym: CPE0950

Alternate gene names: NA

Gene position: 1148633-1149385 (Clockwise)

Preceding gene: 18309931

Following gene: 18309933

Centisome position: 37.89

GC content: 23.51

Gene sequence:

>753_bases
ATGCTTAATTTAATAAAAGCAGAACTTTATAAGATAGCAAGAAGACCTTTATATATTACAATTTGTATAATATTTAATTT
ACTTATAATTTTATCTGGAATAGGCATGCATTATGCTTTCTTAGAAAGTTCTAGAATACCTGACTTCACAGCATTAGTTT
TTATAACAATTAATTTTATGGGAGCTATTCCATGGATAATGCTTATGTTTATAGATGTAGTTTTAGAAGAATATAAAGAA
AATACTCTTAAAAATTTAATTTCTTCAAGTATATCAAGGGAAAAAGTGTATTTAAGTAAATATATAGTTCAGGTAATTAT
ATTTTTAGTTATTGAAATAACAGCAGTATTAACTATGATAGGAACTTCTTATGCTTTAGGATTAGTTGGTCCTAATGGAT
TTTCAGATTTTATGGAAGTAATATTAAGATTACTAATAGCGTTCCCAATATATATTAGTGCATTAGCTATATATGATTTT
ATTACCATAATAACTAAAAAGGAAGGGTTAGCAGTTGTAGTTATCTTAGGTATTGTTTCTGGAGTACCAATGATATTTTC
TATATTATCAAGTATATATGAAGGAATTTTCACTTTAATTTATCCTTATTTATTATTTAATCCTTTAAAGAGTTTAGTCA
GTGAAGTTTTAACTACAAAAATAATAGGAACTAATATTATAGTAGGAATAATAAATACAGTAGTATTTTTAATTTTAGGA
ATTTTAATAATAAGAAAACAAGAAGTTAAATAA

Upstream 100 bases:

>100_bases
AACAGAGCGTTAGTAGAAAATGGAGTTGAAGTTTATTCTTTAGAAAGAATAGGAGTTAACTTAGAAGATTACTTTGTAGA
TTTAATTGGAGGTGAATATA

Downstream 100 bases:

>100_bases
AGGAGGAGGTATATTGGAAGGATTTATAATAGGATTGTCTTTGACAATCCTTATTGTGCTTTTAATAATATTTATTTTAA
AAACTAAAGAAATAAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLNLIKAELYKIARRPLYITICIIFNLLIILSGIGMHYAFLESSRIPDFTALVFITINFMGAIPWIMLMFIDVVLEEYKE
NTLKNLISSSISREKVYLSKYIVQVIIFLVIEITAVLTMIGTSYALGLVGPNGFSDFMEVILRLLIAFPIYISALAIYDF
ITIITKKEGLAVVVILGIVSGVPMIFSILSSIYEGIFTLIYPYLLFNPLKSLVSEVLTTKIIGTNIIVGIINTVVFLILG
ILIIRKQEVK

Sequences:

>Translated_250_residues
MLNLIKAELYKIARRPLYITICIIFNLLIILSGIGMHYAFLESSRIPDFTALVFITINFMGAIPWIMLMFIDVVLEEYKE
NTLKNLISSSISREKVYLSKYIVQVIIFLVIEITAVLTMIGTSYALGLVGPNGFSDFMEVILRLLIAFPIYISALAIYDF
ITIITKKEGLAVVVILGIVSGVPMIFSILSSIYEGIFTLIYPYLLFNPLKSLVSEVLTTKIIGTNIIVGIINTVVFLILG
ILIIRKQEVK
>Mature_250_residues
MLNLIKAELYKIARRPLYITICIIFNLLIILSGIGMHYAFLESSRIPDFTALVFITINFMGAIPWIMLMFIDVVLEEYKE
NTLKNLISSSISREKVYLSKYIVQVIIFLVIEITAVLTMIGTSYALGLVGPNGFSDFMEVILRLLIAFPIYISALAIYDF
ITIITKKEGLAVVVILGIVSGVPMIFSILSSIYEGIFTLIYPYLLFNPLKSLVSEVLTTKIIGTNIIVGIINTVVFLILG
ILIIRKQEVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28043; Mature: 28043

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLIKAELYKIARRPLYITICIIFNLLIILSGIGMHYAFLESSRIPDFTALVFITINFM
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GAIPWIMLMFIDVVLEEYKENTLKNLISSSISREKVYLSKYIVQVIIFLVIEITAVLTMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTSYALGLVGPNGFSDFMEVILRLLIAFPIYISALAIYDFITIITKKEGLAVVVILGIVS
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GVPMIFSILSSIYEGIFTLIYPYLLFNPLKSLVSEVLTTKIIGTNIIVGIINTVVFLILG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIIRKQEVK
HHHHHHHCCC
>Mature Secondary Structure
MLNLIKAELYKIARRPLYITICIIFNLLIILSGIGMHYAFLESSRIPDFTALVFITINFM
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GAIPWIMLMFIDVVLEEYKENTLKNLISSSISREKVYLSKYIVQVIIFLVIEITAVLTMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTSYALGLVGPNGFSDFMEVILRLLIAFPIYISALAIYDFITIITKKEGLAVVVILGIVS
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GVPMIFSILSSIYEGIFTLIYPYLLFNPLKSLVSEVLTTKIIGTNIIVGIINTVVFLILG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIIRKQEVK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA