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The map label for this gene is rubY [H]

Identifier: 18309837

GI number: 18309837

Start: 1046108

End: 1046647

Strand: Direct

Name: rubY [H]

Synonym: CPE0855

Alternate gene names: 18309837

Gene position: 1046108-1046647 (Clockwise)

Preceding gene: 18309836

Following gene: 18309838

Centisome position: 34.51

GC content: 30.74

Gene sequence:

>540_bases
ATGAATTTAAAAGGAAGTAAAACAGAAAAGAATCTTTTAACAGCATTTGCTGGAGAGTCACAAGCTAGAAATAAATATAC
TTTCTATGCAGAGAAAGCTAGAAGAGAAGGATATAATAAGATAGCTGATATCTTTGAAGAAACTGCTCATAATGAGATGG
CTCATGCAAAGATTTGGTTTAAGTTTTTAAATGATGGTACAGTTGGAGAAACTTTAGATAATCTAAAAGATGCAGCAGGT
GGAGAAAACTATGAATGGACAGATATGTATGCTGAGTTTGCTAAAGATGCAAGAGAAGAAGGCTTTGATGAAATAGCATT
CATATTAGAAAAAGTAGGAGAAATAGAAAAGCACCATGAAGAAAGATATTTAGAATTATATAATCTATTAAAGAATGGTG
AAATATTTAAAAAAGATGAAAAACAATTATGGAGATGTCAAAACTGTGGATTTATTTTAGAATCAACAGTAGCACCAGAA
AAGTGTCCTGTTTGTCATCATCCAAAAGCATACTTTGAACTAGTTTGCGATAAATTCTAA

Upstream 100 bases:

>100_bases
TTTAGAATATAAAACCTCAAAAAGGGAAAAATTAAATTGTATTGATGTTTATTAGAAATAAGATCGATAGACTATAAAAT
TAAAATTTGAGGTGGAGTTC

Downstream 100 bases:

>100_bases
TTATAGTATTTAATGAGGATTAAATTATATTGTTTTATAGAATTAACTTCTTCCGCAAATTAGCATATTACCTATAAAAG
ATTTATTTTAATCCTTTTTA

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNLKGSKTEKNLLTAFAGESQARNKYTFYAEKARREGYNKIADIFEETAHNEMAHAKIWFKFLNDGTVGETLDNLKDAAG
GENYEWTDMYAEFAKDAREEGFDEIAFILEKVGEIEKHHEERYLELYNLLKNGEIFKKDEKQLWRCQNCGFILESTVAPE
KCPVCHHPKAYFELVCDKF

Sequences:

>Translated_179_residues
MNLKGSKTEKNLLTAFAGESQARNKYTFYAEKARREGYNKIADIFEETAHNEMAHAKIWFKFLNDGTVGETLDNLKDAAG
GENYEWTDMYAEFAKDAREEGFDEIAFILEKVGEIEKHHEERYLELYNLLKNGEIFKKDEKQLWRCQNCGFILESTVAPE
KCPVCHHPKAYFELVCDKF
>Mature_179_residues
MNLKGSKTEKNLLTAFAGESQARNKYTFYAEKARREGYNKIADIFEETAHNEMAHAKIWFKFLNDGTVGETLDNLKDAAG
GENYEWTDMYAEFAKDAREEGFDEIAFILEKVGEIEKHHEERYLELYNLLKNGEIFKKDEKQLWRCQNCGFILESTVAPE
KCPVCHHPKAYFELVCDKF

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20839; Mature: 20839

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKGSKTEKNLLTAFAGESQARNKYTFYAEKARREGYNKIADIFEETAHNEMAHAKIWF
CCCCCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFLNDGTVGETLDNLKDAAGGENYEWTDMYAEFAKDAREEGFDEIAFILEKVGEIEKHHE
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ERYLELYNLLKNGEIFKKDEKQLWRCQNCGFILESTVAPEKCPVCHHPKAYFELVCDKF
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNLKGSKTEKNLLTAFAGESQARNKYTFYAEKARREGYNKIADIFEETAHNEMAHAKIWF
CCCCCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFLNDGTVGETLDNLKDAAGGENYEWTDMYAEFAKDAREEGFDEIAFILEKVGEIEKHHE
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ERYLELYNLLKNGEIFKKDEKQLWRCQNCGFILESTVAPEKCPVCHHPKAYFELVCDKF
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11972784; 12949112 [H]