| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is arsR [C]
Identifier: 18309819
GI number: 18309819
Start: 1026369
End: 1026653
Strand: Direct
Name: arsR [C]
Synonym: CPE0837
Alternate gene names: 18309819
Gene position: 1026369-1026653 (Clockwise)
Preceding gene: 18309818
Following gene: 18309820
Centisome position: 33.86
GC content: 25.61
Gene sequence:
>285_bases ATGGAGGATAAGTTTGAAATAAATTCAAGGGTTTTTAAAGCTTTAGGAGATTCAAATAGATTAAAAATAATAGATTTGTT ATCAAGTGGAGAAAAGTGTGCTTGTGAAATATTGAAGTTTTTCGATATATCTCAATCCACCTTATCACATCACATGAAGA TTTTAAGTGAATGTGGACTTGTTAAATGTAGAAAAGAAGGAACTTGGAATCATTATAGTTTAAATTTAAATAATGCAAAT AAATCTATATTATTTTTTATGGAAATAATAACATGCTTAGATTAG
Upstream 100 bases:
>100_bases ATTATCCCTAAGTTCAAAATATATAACATTGACAATTGTCGATATATAATTATAATGAAATATAGTTATAAAAAGTTTTA GTATTAGGAAGTGAAGAAAT
Downstream 100 bases:
>100_bases TATGAATTATTTAGGAAATATGATAAATGGTGAAATTTAGTTTAAGTTAATTAGAATTGAAATGTTTAAAAAGATATTAG TTTATTATGAAAATAGTTTA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MEDKFEINSRVFKALGDSNRLKIIDLLSSGEKCACEILKFFDISQSTLSHHMKILSECGLVKCRKEGTWNHYSLNLNNAN KSILFFMEIITCLD
Sequences:
>Translated_94_residues MEDKFEINSRVFKALGDSNRLKIIDLLSSGEKCACEILKFFDISQSTLSHHMKILSECGLVKCRKEGTWNHYSLNLNNAN KSILFFMEIITCLD >Mature_94_residues MEDKFEINSRVFKALGDSNRLKIIDLLSSGEKCACEILKFFDISQSTLSHHMKILSECGLVKCRKEGTWNHYSLNLNNAN KSILFFMEIITCLD
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789916, Length=72, Percent_Identity=43.0555555555556, Blast_Score=60, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 10790; Mature: 10790
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKFEINSRVFKALGDSNRLKIIDLLSSGEKCACEILKFFDISQSTLSHHMKILSECGL CCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC VKCRKEGTWNHYSLNLNNANKSILFFMEIITCLD EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MEDKFEINSRVFKALGDSNRLKIIDLLSSGEKCACEILKFFDISQSTLSHHMKILSECGL CCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC VKCRKEGTWNHYSLNLNNANKSILFFMEIITCLD EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]