Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309811

Identifier: 18309811

GI number: 18309811

Start: 1012767

End: 1013708

Strand: Direct

Name: 18309811

Synonym: CPE0829

Alternate gene names: NA

Gene position: 1012767-1013708 (Clockwise)

Preceding gene: 18309810

Following gene: 18309813

Centisome position: 33.41

GC content: 25.9

Gene sequence:

>942_bases
ATGCTTAAAGATTTAAATGAAAAAATAAAAGAATGTCGTGAAAATATGGCTTTAAAGGAAACACTTGAAAAGAGGAATTT
ATCACTTGAAAATGAATTGGATAATAAGGAGAAAGAATTACTAGAGCTTGAAAAGAGTTTAAATAAGGAGCTTAATGATG
TTCAAAAGTTAAAGAGTTTATCTTTTTCTAATTTAATATCTAATATATTAAGGAATAAGGATGAGAAGTTAGAAAAAGAG
GAAAGAGAGTATTTAGAGGCAAAACTTAAGTATGATAACTTTAAGTTTAAGGTGGAAAAGTTAAGATATGATGTAGAAGA
AAATAACAATAGATTAGGACAGTTAATTAATATTGAAGGTAAGTATAAAGATCTTATAAGTGAAAAGAGAGAGTTAGTTA
AAAAGTTTAATCTAAATATAAGAGACGAAATAATTGAAATAGAAAATGAAATAAAGGATTTACTAAGCAATAAGACAGAA
ATTTCAGAAGCCTTAAGAGAAGCTAATAATTGCTTAATGATTAGTGAAGAAACCTTAAAATCCTTAAGGAGTGCTAAGAA
TTGGGGAATATATGATATTGTTGGGGGAGGAATGATTTCTTCAGCAATCAAACATAATAGAATAGATGATGCTAAAACTT
ATATGGAGAGGCTTAGTTATTCAGTAGATAGATTAAATAAGGAATTAGGGGATGTAGATACCTCTATATTTAATGAAGGT
TTAAATATAAGTGGATTTTCTTATACCTTTGATATTTTCTTTGACAATATATTTAGTGATTTTTCAGTTCAAGGAGAAAT
CAATGATTCTTTATATAAGATTGAGGATTTTCGTAATAATGTTTTAAATTTAATAAGAAAATTAGAGGAAAAAGAAAATA
GTATCGGTTTAAAGGTAAATCTACTAAATGAGAGATTAGAAAGGTTAATAGAAGAAAATTAA

Upstream 100 bases:

>100_bases
GAGGTGAAAAGGGGCATATTAAAGGTTTTATATAAAATTTATGAATATATTATCTCAAGATTTTTTATAAGATTTATTTT
TATGTACCCTAAAAGTAGTT

Downstream 100 bases:

>100_bases
TTATTATAGATATTTTAAAAGAGATATTTGTGTGGCTTAGTCACATAAGTATCTCTTTTAAGGTTTAATTTATAATTTTA
GGGTTTATAGCCTTTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSLSFSNLISNILRNKDEKLEKE
EREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEGKYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTE
ISEALREANNCLMISEETLKSLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG
LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVNLLNERLERLIEEN

Sequences:

>Translated_313_residues
MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSLSFSNLISNILRNKDEKLEKE
EREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEGKYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTE
ISEALREANNCLMISEETLKSLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG
LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVNLLNERLERLIEEN
>Mature_313_residues
MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSLSFSNLISNILRNKDEKLEKE
EREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEGKYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTE
ISEALREANNCLMISEETLKSLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG
LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVNLLNERLERLIEEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36830; Mature: 36830

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFSNLISNILRNKDEKLEKEEREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHCCCHHCCEEECCC
KYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTEISEALREANNCLMISEETLK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECHHHHH
SLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG
HHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVN
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
LLNERLERLIEEN
HHHHHHHHHHCCC
>Mature Secondary Structure
MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFSNLISNILRNKDEKLEKEEREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHCCCHHCCEEECCC
KYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTEISEALREANNCLMISEETLK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECHHHHH
SLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG
HHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVN
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
LLNERLERLIEEN
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA