| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309811
Identifier: 18309811
GI number: 18309811
Start: 1012767
End: 1013708
Strand: Direct
Name: 18309811
Synonym: CPE0829
Alternate gene names: NA
Gene position: 1012767-1013708 (Clockwise)
Preceding gene: 18309810
Following gene: 18309813
Centisome position: 33.41
GC content: 25.9
Gene sequence:
>942_bases ATGCTTAAAGATTTAAATGAAAAAATAAAAGAATGTCGTGAAAATATGGCTTTAAAGGAAACACTTGAAAAGAGGAATTT ATCACTTGAAAATGAATTGGATAATAAGGAGAAAGAATTACTAGAGCTTGAAAAGAGTTTAAATAAGGAGCTTAATGATG TTCAAAAGTTAAAGAGTTTATCTTTTTCTAATTTAATATCTAATATATTAAGGAATAAGGATGAGAAGTTAGAAAAAGAG GAAAGAGAGTATTTAGAGGCAAAACTTAAGTATGATAACTTTAAGTTTAAGGTGGAAAAGTTAAGATATGATGTAGAAGA AAATAACAATAGATTAGGACAGTTAATTAATATTGAAGGTAAGTATAAAGATCTTATAAGTGAAAAGAGAGAGTTAGTTA AAAAGTTTAATCTAAATATAAGAGACGAAATAATTGAAATAGAAAATGAAATAAAGGATTTACTAAGCAATAAGACAGAA ATTTCAGAAGCCTTAAGAGAAGCTAATAATTGCTTAATGATTAGTGAAGAAACCTTAAAATCCTTAAGGAGTGCTAAGAA TTGGGGAATATATGATATTGTTGGGGGAGGAATGATTTCTTCAGCAATCAAACATAATAGAATAGATGATGCTAAAACTT ATATGGAGAGGCTTAGTTATTCAGTAGATAGATTAAATAAGGAATTAGGGGATGTAGATACCTCTATATTTAATGAAGGT TTAAATATAAGTGGATTTTCTTATACCTTTGATATTTTCTTTGACAATATATTTAGTGATTTTTCAGTTCAAGGAGAAAT CAATGATTCTTTATATAAGATTGAGGATTTTCGTAATAATGTTTTAAATTTAATAAGAAAATTAGAGGAAAAAGAAAATA GTATCGGTTTAAAGGTAAATCTACTAAATGAGAGATTAGAAAGGTTAATAGAAGAAAATTAA
Upstream 100 bases:
>100_bases GAGGTGAAAAGGGGCATATTAAAGGTTTTATATAAAATTTATGAATATATTATCTCAAGATTTTTTATAAGATTTATTTT TATGTACCCTAAAAGTAGTT
Downstream 100 bases:
>100_bases TTATTATAGATATTTTAAAAGAGATATTTGTGTGGCTTAGTCACATAAGTATCTCTTTTAAGGTTTAATTTATAATTTTA GGGTTTATAGCCTTTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSLSFSNLISNILRNKDEKLEKE EREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEGKYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTE ISEALREANNCLMISEETLKSLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVNLLNERLERLIEEN
Sequences:
>Translated_313_residues MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSLSFSNLISNILRNKDEKLEKE EREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEGKYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTE ISEALREANNCLMISEETLKSLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVNLLNERLERLIEEN >Mature_313_residues MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSLSFSNLISNILRNKDEKLEKE EREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEGKYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTE ISEALREANNCLMISEETLKSLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVNLLNERLERLIEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36830; Mature: 36830
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFSNLISNILRNKDEKLEKEEREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHCCCHHCCEEECCC KYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTEISEALREANNCLMISEETLK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECHHHHH SLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG HHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVN CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH LLNERLERLIEEN HHHHHHHHHHCCC >Mature Secondary Structure MLKDLNEKIKECRENMALKETLEKRNLSLENELDNKEKELLELEKSLNKELNDVQKLKSL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFSNLISNILRNKDEKLEKEEREYLEAKLKYDNFKFKVEKLRYDVEENNNRLGQLINIEG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHCCCHHCCEEECCC KYKDLISEKRELVKKFNLNIRDEIIEIENEIKDLLSNKTEISEALREANNCLMISEETLK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECHHHHH SLRSAKNWGIYDIVGGGMISSAIKHNRIDDAKTYMERLSYSVDRLNKELGDVDTSIFNEG HHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LNISGFSYTFDIFFDNIFSDFSVQGEINDSLYKIEDFRNNVLNLIRKLEEKENSIGLKVN CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH LLNERLERLIEEN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA