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The map label for this gene is xyn11A [H]

Identifier: 18309809

GI number: 18309809

Start: 1010354

End: 1011271

Strand: Direct

Name: xyn11A [H]

Synonym: CPE0827

Alternate gene names: 18309809

Gene position: 1010354-1011271 (Clockwise)

Preceding gene: 18309808

Following gene: 18309810

Centisome position: 33.33

GC content: 30.61

Gene sequence:

>918_bases
ATGAAGAAAATAATGAAAATGGGTCTTATTCTTAGTGTGTTAATATGTTTAGGATCTTTTGTAGGATGTAATTCACTAAA
CAAAAAGCAAGTTGAGGCCACAGAAAATAAAGAAGCTGTAGAAGCTAAAGATACAACAGATGAGAAAAATATAGAAGGTA
AAGATAAGGCAAAGACAAATGAATTAGAGTATTTACCTTTTGATAAAGATCCAAATGCTGAGGATGGGAAAGTTGTATCA
GAGTACACTAATGGTCTTTTAAAGGGGACATTACAATATCCAGTTAGAAAAGATGGTAAAAAGATAGCGTATTTAACTTT
TGATGATGGTCCATCAACAACTAATACACCAGAGGTTTTAAAGATTTTAGATAAATATAATATAAAAGGAACTTTCTTTG
TAACAGGAAATTCTATAAGTGCTGGAGATAAATCAAAAGAATTATTAAAGCAGATTGTTAAAAATGGACATGCTATAGGA
AATCATACATATAGTCACGATTACAAATATCTTTATCCTAATAGAAAGATGAATGTAAATAACATAATGTCGGATATAAA
TAAGAATGAAAACTTAATGAAAGAAGTCTTAGGTGAAGATTTCTCAACAAAAGTAGTTAGATTCCCAGGTGGATACTGGT
CTTGGCAAGATAGAACACCTATGAAGGAAAAAATGATTCAAGAGGGAATACAAAACATTGATTGGAATGCCTTAAATGGA
GATGCAGAAGGGAAAAAGAAAAATGCAGATGAATTAGTTGAATTTGCTAAGAAAAGTGTAGAAGACTTAGGCCCTAATGC
AGACAATGTAGTAGTTTTAATGCATGATACTTATGGAAAAGAAGAAACAGTTAAGGCTTTACCAAGAATAATAGAGTACT
TACAAAGCAAAGGCTTTGAATTTAAGAGCATTAAATAA

Upstream 100 bases:

>100_bases
TAAAAAAAATTTAAACTGTTTGTTTCTATTTTGTATTTTTTTATATTTTTTATTTTTATATAATAAATTTGCGATAATCA
ATTATACGGGGGATAAATAT

Downstream 100 bases:

>100_bases
ATATATTATAATTTTTACGAACAATAATTAATTATTTAATAAAAATTCTAAAAGAAGTATTAAATAAATATATTGTAAGT
TTTATTTAAAAGATAATATT

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: Endo-1,4-beta-xylanase 11A; Xylanase xyn11A; Xylanase xynT; Acetylated xylan deacetylase [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKKIMKMGLILSVLICLGSFVGCNSLNKKQVEATENKEAVEAKDTTDEKNIEGKDKAKTNELEYLPFDKDPNAEDGKVVS
EYTNGLLKGTLQYPVRKDGKKIAYLTFDDGPSTTNTPEVLKILDKYNIKGTFFVTGNSISAGDKSKELLKQIVKNGHAIG
NHTYSHDYKYLYPNRKMNVNNIMSDINKNENLMKEVLGEDFSTKVVRFPGGYWSWQDRTPMKEKMIQEGIQNIDWNALNG
DAEGKKKNADELVEFAKKSVEDLGPNADNVVVLMHDTYGKEETVKALPRIIEYLQSKGFEFKSIK

Sequences:

>Translated_305_residues
MKKIMKMGLILSVLICLGSFVGCNSLNKKQVEATENKEAVEAKDTTDEKNIEGKDKAKTNELEYLPFDKDPNAEDGKVVS
EYTNGLLKGTLQYPVRKDGKKIAYLTFDDGPSTTNTPEVLKILDKYNIKGTFFVTGNSISAGDKSKELLKQIVKNGHAIG
NHTYSHDYKYLYPNRKMNVNNIMSDINKNENLMKEVLGEDFSTKVVRFPGGYWSWQDRTPMKEKMIQEGIQNIDWNALNG
DAEGKKKNADELVEFAKKSVEDLGPNADNVVVLMHDTYGKEETVKALPRIIEYLQSKGFEFKSIK
>Mature_305_residues
MKKIMKMGLILSVLICLGSFVGCNSLNKKQVEATENKEAVEAKDTTDEKNIEGKDKAKTNELEYLPFDKDPNAEDGKVVS
EYTNGLLKGTLQYPVRKDGKKIAYLTFDDGPSTTNTPEVLKILDKYNIKGTFFVTGNSISAGDKSKELLKQIVKNGHAIG
NHTYSHDYKYLYPNRKMNVNNIMSDINKNENLMKEVLGEDFSTKVVRFPGGYWSWQDRTPMKEKMIQEGIQNIDWNALNG
DAEGKKKNADELVEFAKKSVEDLGPNADNVVVLMHDTYGKEETVKALPRIIEYLQSKGFEFKSIK

Specific function: Endo-acting xylanase which specifically cleaves internal linkages on the xylan backbone, releasing xylooligosaccharides. Is also probably able, via its C-terminal domain, to remove acetyl groups from acetylated xylan, and thus it is probably capable of hy

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 polysaccharide deacetylase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR008985
- InterPro:   IPR008979
- InterPro:   IPR011330
- InterPro:   IPR001137
- InterPro:   IPR013319
- InterPro:   IPR018208
- InterPro:   IPR002509 [H]

Pfam domain/function: PF03422 CBM_6; PF00457 Glyco_hydro_11; PF01522 Polysacc_deac_1 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 34412; Mature: 34412

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIMKMGLILSVLICLGSFVGCNSLNKKQVEATENKEAVEAKDTTDEKNIEGKDKAKTN
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC
ELEYLPFDKDPNAEDGKVVSEYTNGLLKGTLQYPVRKDGKKIAYLTFDDGPSTTNTPEVL
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHH
KILDKYNIKGTFFVTGNSISAGDKSKELLKQIVKNGHAIGNHTYSHDYKYLYPNRKMNVN
HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHH
NIMSDINKNENLMKEVLGEDFSTKVVRFPGGYWSWQDRTPMKEKMIQEGIQNIDWNALNG
HHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
DAEGKKKNADELVEFAKKSVEDLGPNADNVVVLMHDTYGKEETVKALPRIIEYLQSKGFE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
FKSIK
CCCCC
>Mature Secondary Structure
MKKIMKMGLILSVLICLGSFVGCNSLNKKQVEATENKEAVEAKDTTDEKNIEGKDKAKTN
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC
ELEYLPFDKDPNAEDGKVVSEYTNGLLKGTLQYPVRKDGKKIAYLTFDDGPSTTNTPEVL
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHH
KILDKYNIKGTFFVTGNSISAGDKSKELLKQIVKNGHAIGNHTYSHDYKYLYPNRKMNVN
HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHH
NIMSDINKNENLMKEVLGEDFSTKVVRFPGGYWSWQDRTPMKEKMIQEGIQNIDWNALNG
HHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
DAEGKKKNADELVEFAKKSVEDLGPNADNVVVLMHDTYGKEETVKALPRIIEYLQSKGFE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
FKSIK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA