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The map label for this gene is ybhA [C]

Identifier: 18309802

GI number: 18309802

Start: 1004945

End: 1005772

Strand: Direct

Name: ybhA [C]

Synonym: CPE0820

Alternate gene names: 18309802

Gene position: 1004945-1005772 (Clockwise)

Preceding gene: 18309801

Following gene: 18309803

Centisome position: 33.15

GC content: 26.69

Gene sequence:

>828_bases
ATGGAGTTATTTGTTTCAGATTTAGATGGAACTTTATTAAATAAGGATCAAGTTATATCAGATTATTCTAAAAAGGAATT
AAATAGACTTATAAGCACAGGGGTTAATTTTGCAATTGCAACAGCTAGAAGTCCAGCTACTGTTTCAGATATTTTAGATG
GAATAGATATAAAAACACCTGTTGTTCTTATGAATGGAGTTATAATTTTTGATATTGAAAAGAAAAAATATATAGATGTT
AAAGAAATAGACAAAGAAAGTGTCAAAGAGATTATCAAAATACTTCAAGAATATAACAAAACATTCTTTCTTTATGGGAT
AAAAGATGATTATCTATGGGTTTATCATAAAGATTTTACTTATGATTTTGAGAGAGAATATTATGAGGAAAGATGCAATA
AAAAACTTAAGTCTTTTAAAAAAGTTGAAAATTATTTAGATATTTTAGATGATAATCAAATAATAAATTTTGTGTTTTTT
GAAGATAATAAACTTATAGCCCATGAATTATTTGAGAAGATACTGAAAGTAAAAGGTGTTACTGGTAATTGTTATAAAGA
TATATATAACGAAGGAGCTTTTTTCTTAGATGTATATAATGAGGAGGCTTCAAAAGCTAATGGAATAAAATTTTTGGCGG
ATTATGTAGAACATAGTAAAGTTATAACTTTTGGTGATGGAGAAAATGATGTTCCTATGTTTGAAATTGCAGATGAATGT
TATGCTTTAGAAAATGCTTCAGCTGGGTTAAAGGCTATAGCTACGGGGATTATTGGCAATAATAATGATGATGCAGTGGT
TAGATTTTTGATTGAAAGATTAAAATAG

Upstream 100 bases:

>100_bases
AATGGCTTTTCATATACTCCTTTGAATAATATTTAGATATATTGTATATTAGATAAAAAAAGGTAATTAATGTTTAGGAC
ATTAGAGAAAGAGGTATTAA

Downstream 100 bases:

>100_bases
AAAAAATGTAAAATGAATAGAAAAAATATAGAAGAAGTATAATTAATAGGTGTACTTCTTTTATAATTTGTCAAAATAAA
GTTTGAATTTTTTGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MELFVSDLDGTLLNKDQVISDYSKKELNRLISTGVNFAIATARSPATVSDILDGIDIKTPVVLMNGVIIFDIEKKKYIDV
KEIDKESVKEIIKILQEYNKTFFLYGIKDDYLWVYHKDFTYDFEREYYEERCNKKLKSFKKVENYLDILDDNQIINFVFF
EDNKLIAHELFEKILKVKGVTGNCYKDIYNEGAFFLDVYNEEASKANGIKFLADYVEHSKVITFGDGENDVPMFEIADEC
YALENASAGLKAIATGIIGNNNDDAVVRFLIERLK

Sequences:

>Translated_275_residues
MELFVSDLDGTLLNKDQVISDYSKKELNRLISTGVNFAIATARSPATVSDILDGIDIKTPVVLMNGVIIFDIEKKKYIDV
KEIDKESVKEIIKILQEYNKTFFLYGIKDDYLWVYHKDFTYDFEREYYEERCNKKLKSFKKVENYLDILDDNQIINFVFF
EDNKLIAHELFEKILKVKGVTGNCYKDIYNEGAFFLDVYNEEASKANGIKFLADYVEHSKVITFGDGENDVPMFEIADEC
YALENASAGLKAIATGIIGNNNDDAVVRFLIERLK
>Mature_275_residues
MELFVSDLDGTLLNKDQVISDYSKKELNRLISTGVNFAIATARSPATVSDILDGIDIKTPVVLMNGVIIFDIEKKKYIDV
KEIDKESVKEIIKILQEYNKTFFLYGIKDDYLWVYHKDFTYDFEREYYEERCNKKLKSFKKVENYLDILDDNQIINFVFF
EDNKLIAHELFEKILKVKGVTGNCYKDIYNEGAFFLDVYNEEASKANGIKFLADYVEHSKVITFGDGENDVPMFEIADEC
YALENASAGLKAIATGIIGNNNDDAVVRFLIERLK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI48994981, Length=276, Percent_Identity=25.3623188405797, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI2367265, Length=278, Percent_Identity=23.3812949640288, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 31663; Mature: 31663

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFVSDLDGTLLNKDQVISDYSKKELNRLISTGVNFAIATARSPATVSDILDGIDIKTP
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCC
VVLMNGVIIFDIEKKKYIDVKEIDKESVKEIIKILQEYNKTFFLYGIKDDYLWVYHKDFT
CEECCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCC
YDFEREYYEERCNKKLKSFKKVENYLDILDDNQIINFVFFEDNKLIAHELFEKILKVKGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEHHHHHHHHHHHHCCC
TGNCYKDIYNEGAFFLDVYNEEASKANGIKFLADYVEHSKVITFGDGENDVPMFEIADEC
CCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH
YALENASAGLKAIATGIIGNNNDDAVVRFLIERLK
HHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MELFVSDLDGTLLNKDQVISDYSKKELNRLISTGVNFAIATARSPATVSDILDGIDIKTP
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCC
VVLMNGVIIFDIEKKKYIDVKEIDKESVKEIIKILQEYNKTFFLYGIKDDYLWVYHKDFT
CEECCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCC
YDFEREYYEERCNKKLKSFKKVENYLDILDDNQIINFVFFEDNKLIAHELFEKILKVKGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEHHHHHHHHHHHHCCC
TGNCYKDIYNEGAFFLDVYNEEASKANGIKFLADYVEHSKVITFGDGENDVPMFEIADEC
CCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH
YALENASAGLKAIATGIIGNNNDDAVVRFLIERLK
HHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]