| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is yiaC [H]
Identifier: 18309712
GI number: 18309712
Start: 906584
End: 907048
Strand: Direct
Name: yiaC [H]
Synonym: CPE0730
Alternate gene names: 18309712
Gene position: 906584-907048 (Clockwise)
Preceding gene: 18309711
Following gene: 18309713
Centisome position: 29.91
GC content: 25.16
Gene sequence:
>465_bases ATGGGGGAAAGAGTTTTGGAAATTAGAGAACCTAAAAATTGTGAAATAGATGATATTATGAAAATTTGGTTGGAGAGTAC AGTAGAAGCTCATTATTTTATTGAAGAAGAATATTGGAAGAAAAATTATGAAGTTGTAAGAGATATTTATATTCCAATGG CTAAAACTTTTGTTTACTGTGATGAAGGAAAAATAAATGGATTTATAAGTATAATAGATAGTAACTTTATAGGTGCTTTA TTTGTTCACACTAAAAGTCAAGGAAGTGGAATAGGAAAAAGCTTACTTGAATATGTTAAAAATAAATATGAAAATATAGA ATTAGCTGTTTATAAAGATAATAAAAAGGCAGTTGAATTTTATAAGAAACATGATTTTAAAATAATAAAAGAGCAAGAAA ACGAAGATTCAGGTCATTTAGAATATTTAATGTCATATTCTAAAAATAGTAGTGAGAACCAATAA
Upstream 100 bases:
>100_bases TTGAATAAGTTAATAAATTTTTTATAAAATGAAGATACAAAGTATAAAGAAGATATTTTTTATAAAAGACTTAATAATTT AAAGATGTTATAGGAATAGT
Downstream 100 bases:
>100_bases AAATTATTAACACTTAAGTTTATTGTAAATGGGCTTAGGTGTTTTTTATTAGTATTTATAATGAAGAAATTAGATTTAGA AAGAGGTTAAACTTTGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MGERVLEIREPKNCEIDDIMKIWLESTVEAHYFIEEEYWKKNYEVVRDIYIPMAKTFVYCDEGKINGFISIIDSNFIGAL FVHTKSQGSGIGKSLLEYVKNKYENIELAVYKDNKKAVEFYKKHDFKIIKEQENEDSGHLEYLMSYSKNSSENQ
Sequences:
>Translated_154_residues MGERVLEIREPKNCEIDDIMKIWLESTVEAHYFIEEEYWKKNYEVVRDIYIPMAKTFVYCDEGKINGFISIIDSNFIGAL FVHTKSQGSGIGKSLLEYVKNKYENIELAVYKDNKKAVEFYKKHDFKIIKEQENEDSGHLEYLMSYSKNSSENQ >Mature_153_residues GERVLEIREPKNCEIDDIMKIWLESTVEAHYFIEEEYWKKNYEVVRDIYIPMAKTFVYCDEGKINGFISIIDSNFIGALF VHTKSQGSGIGKSLLEYVKNKYENIELAVYKDNKKAVEFYKKHDFKIIKEQENEDSGHLEYLMSYSKNSSENQ
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789972, Length=140, Percent_Identity=35.7142857142857, Blast_Score=118, Evalue=2e-28, Organism=Escherichia coli, GI1790442, Length=135, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 18175; Mature: 18044
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERVLEIREPKNCEIDDIMKIWLESTVEAHYFIEEEYWKKNYEVVRDIYIPMAKTFVYC CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHEEEEE DEGKINGFISIIDSNFIGALFVHTKSQGSGIGKSLLEYVKNKYENIELAVYKDNKKAVEF CCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHH YKKHDFKIIKEQENEDSGHLEYLMSYSKNSSENQ HHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure GERVLEIREPKNCEIDDIMKIWLESTVEAHYFIEEEYWKKNYEVVRDIYIPMAKTFVYC CCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHEEEEE DEGKINGFISIIDSNFIGALFVHTKSQGSGIGKSLLEYVKNKYENIELAVYKDNKKAVEF CCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHH YKKHDFKIIKEQENEDSGHLEYLMSYSKNSSENQ HHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2180922; 8041620; 9278503 [H]