Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309658

Identifier: 18309658

GI number: 18309658

Start: 841162

End: 841896

Strand: Direct

Name: 18309658

Synonym: CPE0676

Alternate gene names: NA

Gene position: 841162-841896 (Clockwise)

Preceding gene: 18309657

Following gene: 18309659

Centisome position: 27.75

GC content: 26.94

Gene sequence:

>735_bases
ATGCCTTTTACCCTAGCGCATCCAGCAGCTGTGGTTTTTTTAAAGAATAAAAAGTTTAATTTTACAGCTTTAATTTTAGG
GAGTATGGCTCCAGATTTTATATATTTTCTTAATTTTAGACCTTATGGAAATTTAGGACACCAAATATTAGGCTTTTTTA
TATTAAATTTGCCTTTATGTATTTTATTAGCGTATATTTTTCATAACTTTATAAAATCTCCACTTATAAGTCATTTGCCG
AGACCTTTAGATAACTGGTATGGTTACTTAAGAACAGAACAATTTGGCTTGCATTCATGGAAAGAAGTAATTGTTTTCAT
ATATTCGGCTTTATTAGGAATGATTACCCATGTTTTGTGGGATGGATTTACTCATAAAACTGGATTCTTTGTGCGTCACA
TTCCTTGGCTTCAACAAAAAATTATACTATTTGGTGGAGAAGAAATTTATATATATAAGTTAGTTCAACATACAAGTACT
GTTATTGGAATAATTATAGTGTTATTTTTCTTATATAAACTTAGGGATAGTAATACTAGAATTTTGTGGGGACATAAAAG
TTTTAAGGATAAGTTTATATATGATTTAATAGTTATAATAACTGCAATAATAGTTTTAGTTTTAAGTTACATAATATTTA
AATACTTAAGTATTCCTTACGGAATTGGAAATCTTGTGGTTTCAAGTATAAATGGAATTTTTATTGGAATTTTAATTGCT
TCCTTTAAAAAATAA

Upstream 100 bases:

>100_bases
GTTTCATGTTAATGGGTTAAAAGAAAAATTTTAGTCGTTTTTACTTAGTCTTTTATATGTTATAATTGGATAATATTCAA
TATAATAAGGGGGAGTAAGT

Downstream 100 bases:

>100_bases
TTTGTAAAAAGATATATTTTTATTAGTTTATTCTTTATGTTTATACTAAAAATAAGGAATATTATTATCTCTATAGATTA
GGTGGATTTAAAGTCTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MPFTLAHPAAVVFLKNKKFNFTALILGSMAPDFIYFLNFRPYGNLGHQILGFFILNLPLCILLAYIFHNFIKSPLISHLP
RPLDNWYGYLRTEQFGLHSWKEVIVFIYSALLGMITHVLWDGFTHKTGFFVRHIPWLQQKIILFGGEEIYIYKLVQHTST
VIGIIIVLFFLYKLRDSNTRILWGHKSFKDKFIYDLIVIITAIIVLVLSYIIFKYLSIPYGIGNLVVSSINGIFIGILIA
SFKK

Sequences:

>Translated_244_residues
MPFTLAHPAAVVFLKNKKFNFTALILGSMAPDFIYFLNFRPYGNLGHQILGFFILNLPLCILLAYIFHNFIKSPLISHLP
RPLDNWYGYLRTEQFGLHSWKEVIVFIYSALLGMITHVLWDGFTHKTGFFVRHIPWLQQKIILFGGEEIYIYKLVQHTST
VIGIIIVLFFLYKLRDSNTRILWGHKSFKDKFIYDLIVIITAIIVLVLSYIIFKYLSIPYGIGNLVVSSINGIFIGILIA
SFKK
>Mature_243_residues
PFTLAHPAAVVFLKNKKFNFTALILGSMAPDFIYFLNFRPYGNLGHQILGFFILNLPLCILLAYIFHNFIKSPLISHLPR
PLDNWYGYLRTEQFGLHSWKEVIVFIYSALLGMITHVLWDGFTHKTGFFVRHIPWLQQKIILFGGEEIYIYKLVQHTSTV
IGIIIVLFFLYKLRDSNTRILWGHKSFKDKFIYDLIVIITAIIVLVLSYIIFKYLSIPYGIGNLVVSSINGIFIGILIAS
FKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28239; Mature: 28108

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFTLAHPAAVVFLKNKKFNFTALILGSMAPDFIYFLNFRPYGNLGHQILGFFILNLPLC
CCCCCCCCEEEEEEECCCCCCCEEEHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
ILLAYIFHNFIKSPLISHLPRPLDNWYGYLRTEQFGLHSWKEVIVFIYSALLGMITHVLW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFTHKTGFFVRHIPWLQQKIILFGGEEIYIYKLVQHTSTVIGIIIVLFFLYKLRDSNTR
CCCCCCCCHHHHHCHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ILWGHKSFKDKFIYDLIVIITAIIVLVLSYIIFKYLSIPYGIGNLVVSSINGIFIGILIA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SFKK
HHCC
>Mature Secondary Structure 
PFTLAHPAAVVFLKNKKFNFTALILGSMAPDFIYFLNFRPYGNLGHQILGFFILNLPLC
CCCCCCCEEEEEEECCCCCCCEEEHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
ILLAYIFHNFIKSPLISHLPRPLDNWYGYLRTEQFGLHSWKEVIVFIYSALLGMITHVLW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFTHKTGFFVRHIPWLQQKIILFGGEEIYIYKLVQHTSTVIGIIIVLFFLYKLRDSNTR
CCCCCCCCHHHHHCHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ILWGHKSFKDKFIYDLIVIITAIIVLVLSYIIFKYLSIPYGIGNLVVSSINGIFIGILIA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SFKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA