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The map label for this gene is recQ [C]

Identifier: 18309656

GI number: 18309656

Start: 839807

End: 840892

Strand: Direct

Name: recQ [C]

Synonym: CPE0674

Alternate gene names: 18309656

Gene position: 839807-840892 (Clockwise)

Preceding gene: 18309655

Following gene: 18309657

Centisome position: 27.7

GC content: 24.4

Gene sequence:

>1086_bases
ATGTTAAAAGAAATTATTTTCGGAATTTCTTCTATAAAGGGCCCTACATGGCTTAAAGAATTCAATGAGAATAATAAACA
ATTAGAAGATTTAAAGATTCTTAGTGGAAAAGTTTATAGTGAGAAAAAGAAATTAATAGATAGAGATATTATGTACTTAA
CTTATGGTATTGAGGGAGAAAAAAATGTTAGTTATGAAATAAAAAATTCCTATATACCAATGTTAGCTTTACATGATATT
AGGATAGAGGACGGGGAATCAGTTGCCCAAATGGATTATATTCTAATAACTAAAAGTTTTATTTTAGTCTTAGAAACTAA
GGCCTTAAGTGGAGATATAACTGTAAATGAGTCAGGAGAATTTATAAGATATTTTAAAAATAAAGAAGGAAAAGTTTATA
GAAAAGAAGGAATATATAGTCCAGTAGCTCAAAATGAAAGACATGTTAGAGTGTTAACTGAGTATTTAAAGAAAAATAAA
ATGATAAAAAAATACCCTATATATTCTTGTGTAGTAATTGCAAACTCTAAAAGTGTAATAAATAAGTATAAAGCACCAAA
GGAAATAAAATCACAAATTATAAAATATGATCAATTAACATCTTTTATAAAAGAGAAATTAAACTATCATAAGATAAAGC
AAGATTTTAAGGTTTTAGATAAAGTAGAATATTCAATAGGTAAATTTTTATTAGAAAATAATAAACCTATAGAGTTTGAT
TATTATAAAAAATACTCCTTAAGTGAAGAGGATTTTATAAAAAAAGAGTCAGAAGTATACAGTGAAGAAAAATCAAACAA
TGATAATTTTAATGATGAGGTTTTATTTAATAGAGATAATAAATCTTATGAAGGTAAAATATTAAGTAATAAAAATAAAG
AAGAACTGAGGAGAAAACTTAAACAATTAAGAATAAATTTTGCAATAAAAGAAAAACTTCCTCCTTATTGCATTTTTAAT
GATGAGACTCTAAATGATCTTTTAGATAAAATGCCAAAGAATAAAGAAGAGCTTATGAAAGTTAAGGGATTGGCTAAGGT
GAAGGTCAATAAATATGGGGAAGAAATATTAGGAGTTTTAAATTAA

Upstream 100 bases:

>100_bases
TTTTAAATACATGCTTTTAGCTTAAAAATACAGTGTTAACAAAAAAAGTTACAAAATATGCTACAATATGAATGAAATGT
TAATAGGAGGTAGTATATAA

Downstream 100 bases:

>100_bases
AATGGAATTTTTAAAGAAGCATGAGTTATGGTTATTAATAATTAATGTTATTTTGTTTCTTGCAATAACTTCAGTAGAGT
CTCAAATAAATAAAATAATA

Product: HRDC domain protein

Products: NA

Alternate protein names: HRDC Domain-Containing Protein; NERD Domain-Containing Protein; Hrdc Domain Protein; HRDC Domain Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLKEIIFGISSIKGPTWLKEFNENNKQLEDLKILSGKVYSEKKKLIDRDIMYLTYGIEGEKNVSYEIKNSYIPMLALHDI
RIEDGESVAQMDYILITKSFILVLETKALSGDITVNESGEFIRYFKNKEGKVYRKEGIYSPVAQNERHVRVLTEYLKKNK
MIKKYPIYSCVVIANSKSVINKYKAPKEIKSQIIKYDQLTSFIKEKLNYHKIKQDFKVLDKVEYSIGKFLLENNKPIEFD
YYKKYSLSEEDFIKKESEVYSEEKSNNDNFNDEVLFNRDNKSYEGKILSNKNKEELRRKLKQLRINFAIKEKLPPYCIFN
DETLNDLLDKMPKNKEELMKVKGLAKVKVNKYGEEILGVLN

Sequences:

>Translated_361_residues
MLKEIIFGISSIKGPTWLKEFNENNKQLEDLKILSGKVYSEKKKLIDRDIMYLTYGIEGEKNVSYEIKNSYIPMLALHDI
RIEDGESVAQMDYILITKSFILVLETKALSGDITVNESGEFIRYFKNKEGKVYRKEGIYSPVAQNERHVRVLTEYLKKNK
MIKKYPIYSCVVIANSKSVINKYKAPKEIKSQIIKYDQLTSFIKEKLNYHKIKQDFKVLDKVEYSIGKFLLENNKPIEFD
YYKKYSLSEEDFIKKESEVYSEEKSNNDNFNDEVLFNRDNKSYEGKILSNKNKEELRRKLKQLRINFAIKEKLPPYCIFN
DETLNDLLDKMPKNKEELMKVKGLAKVKVNKYGEEILGVLN
>Mature_361_residues
MLKEIIFGISSIKGPTWLKEFNENNKQLEDLKILSGKVYSEKKKLIDRDIMYLTYGIEGEKNVSYEIKNSYIPMLALHDI
RIEDGESVAQMDYILITKSFILVLETKALSGDITVNESGEFIRYFKNKEGKVYRKEGIYSPVAQNERHVRVLTEYLKKNK
MIKKYPIYSCVVIANSKSVINKYKAPKEIKSQIIKYDQLTSFIKEKLNYHKIKQDFKVLDKVEYSIGKFLLENNKPIEFD
YYKKYSLSEEDFIKKESEVYSEEKSNNDNFNDEVLFNRDNKSYEGKILSNKNKEELRRKLKQLRINFAIKEKLPPYCIFN
DETLNDLLDKMPKNKEELMKVKGLAKVKVNKYGEEILGVLN

Specific function: Involved In The Recf Recombination Pathway; Its Gene Expression Is Under The Regulation Of The Sos System. It Is A DNA Helicase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 42480; Mature: 42480

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50965 NERD ; PS50967 HRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEIIFGISSIKGPTWLKEFNENNKQLEDLKILSGKVYSEKKKLIDRDIMYLTYGIEGE
CHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCC
KNVSYEIKNSYIPMLALHDIRIEDGESVAQMDYILITKSFILVLETKALSGDITVNESGE
CCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEEECCCCEEECCCCC
FIRYFKNKEGKVYRKEGIYSPVAQNERHVRVLTEYLKKNKMIKKYPIYSCVVIANSKSVI
HHHHHCCCCCCEEECCCCCCCHHCCCHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHH
NKYKAPKEIKSQIIKYDQLTSFIKEKLNYHKIKQDFKVLDKVEYSIGKFLLENNKPIEFD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YYKKYSLSEEDFIKKESEVYSEEKSNNDNFNDEVLFNRDNKSYEGKILSNKNKEELRRKL
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEECCCCHHHHHHHH
KQLRINFAIKEKLPPYCIFNDETLNDLLDKMPKNKEELMKVKGLAKVKVNKYGEEILGVL
HHHHHCEEECCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHCHHEEHHHHHHHHHHHHC
N
C
>Mature Secondary Structure
MLKEIIFGISSIKGPTWLKEFNENNKQLEDLKILSGKVYSEKKKLIDRDIMYLTYGIEGE
CHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCC
KNVSYEIKNSYIPMLALHDIRIEDGESVAQMDYILITKSFILVLETKALSGDITVNESGE
CCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEEECCCCEEECCCCC
FIRYFKNKEGKVYRKEGIYSPVAQNERHVRVLTEYLKKNKMIKKYPIYSCVVIANSKSVI
HHHHHCCCCCCEEECCCCCCCHHCCCHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHH
NKYKAPKEIKSQIIKYDQLTSFIKEKLNYHKIKQDFKVLDKVEYSIGKFLLENNKPIEFD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YYKKYSLSEEDFIKKESEVYSEEKSNNDNFNDEVLFNRDNKSYEGKILSNKNKEELRRKL
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEECCCCHHHHHHHH
KQLRINFAIKEKLPPYCIFNDETLNDLLDKMPKNKEELMKVKGLAKVKVNKYGEEILGVL
HHHHHCEEECCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHCHHEEHHHHHHHHHHHHC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA