Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is bcn [H]

Identifier: 18309607

GI number: 18309607

Start: 782941

End: 784593

Strand: Direct

Name: bcn [H]

Synonym: CPE0625

Alternate gene names: 18309607

Gene position: 782941-784593 (Clockwise)

Preceding gene: 18309606

Following gene: 18309608

Centisome position: 25.83

GC content: 30.85

Gene sequence:

>1653_bases
GTGAAGAGAAAAAGTATTGCATTAGTTCTTTCTTTAGGACTGTTAGGTTCTGTTACTTTAGGTAGCATTGAAACAGTTTA
TGCTGAAGGAAATAAGAACACAACTAATATTAGTGAAGTAAAAGTTGACAATAAGGTAGAATTAAGTGACAAGAAAAACA
AAGAGATAAAAAATGGATGGGAAATTATAAATGATAAGTGGTATTATCATGAAAGTGATGGAAGTTTAGCTACTGGGTTT
AAAAAAATAAATGATGAATGGTATCGTTTTGATAATAATGGAGAAATGCAAGTTGGATGGCAATATATAAATGATATATG
GTACCATTTTAGAGATAATGGCCCTATGGATACTGGTTGGAGAAAGATTAATAATGATTGGTATTATTTTAATAATGATG
GAGAAATGCAAACAGGATGGCAGTCTATAGGGAATAAAAGATATCATTTCAGAGATAATGGAGTAATGGACACTGGTTGG
AGATCATTAGGAAGTGATTGGTATCTATTAAACTCAGATGGAGAAATGCAGACAGGTTGGCAACATATAAATAATATATG
GTATCATCTTGAAGATGACGGTAAAATGAATACTGGATGGCAAGATATAAATGGAGACAAATATTATTTTAATAATAGCG
GCGAAATGCAAACAGGTTGGCAATATATAAATGATATATGGTACCATTTAAGAGAAAATGGACCTGCAGATACTGGTTGG
AGAAAAATAAATAATGACTGGTATTACTTTGATAATATAGGTAAAATGCAGACAAGCTGGCAAGATATTGATAACTCAAC
ATATTATTTCAATGATAATGGAGTTATGAGTATTGGATGGAGAACTATAGAAAGTGAATGGTATTATTTTAATAATAGTG
GAGCAAAAGAAAGCAACAAAGTTATAGATGATTGGTATTTAGATAAAAATGGAGTAGGAAATCAGATTGTAACTGAAGGT
GTATATGGAAAGAGTGGAAATGGCAGAGATTTAGAATATTATAGAATAGGACATGGTAAAAAGGTATTATTCTCAGTGTT
TGGAGTACATGGATATGAAGATGCTTGGAGTGGTGATTCACAAGAACTTAAAATAATAGCTGAAAAGTCAGTAAATAGAT
TAAGAAGTGAATATAATACTAAAGGAATAGATTTAAGTGAATGGAGTGTATATATTATACCTTCAGCTAATCCAGATGGA
AGAATTGATGGATGGACAAACAATGGACCAGGTAGAACTACAGTAACAACTAAGAATGATATAAATAGATCATTCCCTAC
AGGATTTTCTCCTTTTTATAGTGCTAGAAACTATACAGGACCAACAGCATTAGGTTCTCCAGAGGCAAAGGCTTTATATG
GTTTCATAAATAAAACTATGGAAGGAGCAACTGAAAAAGTTCTTTTAGATGTACATGGATGGGAAAACAAAACAATAGGT
AATCCTAGCATTGCTAGATATTTTGATAATGAATTTGGCTTTAGAAATATAAATAAATATCCAGGTGGATTTGTAATAAC
TTATGGAAATGCTATAGGAGCTAAATCAGTTTTAGTAGAATTTCCAGTTCCTTATTCACATCAAGATATATTAAGAAGAG
ATTTTTCAGGTAAATTTGCTAATGGATTAGTAAATATTCTTTTAAATAACTAA

Upstream 100 bases:

>100_bases
TATTATAGAATAAATTTCTAATATTGATAAATATAACGTAATAAGGTAATATTTAAGTATAAGCAAGTTTATACGCTAAT
TCAAAAAAAGAGGTGGACAA

Downstream 100 bases:

>100_bases
AAATAAGTATAACTAAACTATATGATAGAATTTTAAAAATAATTTTATCATATAGTTTTTTTATGTTGTTTAAATTTTAA
TTTATACATAATTTAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MKRKSIALVLSLGLLGSVTLGSIETVYAEGNKNTTNISEVKVDNKVELSDKKNKEIKNGWEIINDKWYYHESDGSLATGF
KKINDEWYRFDNNGEMQVGWQYINDIWYHFRDNGPMDTGWRKINNDWYYFNNDGEMQTGWQSIGNKRYHFRDNGVMDTGW
RSLGSDWYLLNSDGEMQTGWQHINNIWYHLEDDGKMNTGWQDINGDKYYFNNSGEMQTGWQYINDIWYHLRENGPADTGW
RKINNDWYYFDNIGKMQTSWQDIDNSTYYFNDNGVMSIGWRTIESEWYYFNNSGAKESNKVIDDWYLDKNGVGNQIVTEG
VYGKSGNGRDLEYYRIGHGKKVLFSVFGVHGYEDAWSGDSQELKIIAEKSVNRLRSEYNTKGIDLSEWSVYIIPSANPDG
RIDGWTNNGPGRTTVTTKNDINRSFPTGFSPFYSARNYTGPTALGSPEAKALYGFINKTMEGATEKVLLDVHGWENKTIG
NPSIARYFDNEFGFRNINKYPGGFVITYGNAIGAKSVLVEFPVPYSHQDILRRDFSGKFANGLVNILLNN

Sequences:

>Translated_550_residues
MKRKSIALVLSLGLLGSVTLGSIETVYAEGNKNTTNISEVKVDNKVELSDKKNKEIKNGWEIINDKWYYHESDGSLATGF
KKINDEWYRFDNNGEMQVGWQYINDIWYHFRDNGPMDTGWRKINNDWYYFNNDGEMQTGWQSIGNKRYHFRDNGVMDTGW
RSLGSDWYLLNSDGEMQTGWQHINNIWYHLEDDGKMNTGWQDINGDKYYFNNSGEMQTGWQYINDIWYHLRENGPADTGW
RKINNDWYYFDNIGKMQTSWQDIDNSTYYFNDNGVMSIGWRTIESEWYYFNNSGAKESNKVIDDWYLDKNGVGNQIVTEG
VYGKSGNGRDLEYYRIGHGKKVLFSVFGVHGYEDAWSGDSQELKIIAEKSVNRLRSEYNTKGIDLSEWSVYIIPSANPDG
RIDGWTNNGPGRTTVTTKNDINRSFPTGFSPFYSARNYTGPTALGSPEAKALYGFINKTMEGATEKVLLDVHGWENKTIG
NPSIARYFDNEFGFRNINKYPGGFVITYGNAIGAKSVLVEFPVPYSHQDILRRDFSGKFANGLVNILLNN
>Mature_550_residues
MKRKSIALVLSLGLLGSVTLGSIETVYAEGNKNTTNISEVKVDNKVELSDKKNKEIKNGWEIINDKWYYHESDGSLATGF
KKINDEWYRFDNNGEMQVGWQYINDIWYHFRDNGPMDTGWRKINNDWYYFNNDGEMQTGWQSIGNKRYHFRDNGVMDTGW
RSLGSDWYLLNSDGEMQTGWQHINNIWYHLEDDGKMNTGWQDINGDKYYFNNSGEMQTGWQYINDIWYHLRENGPADTGW
RKINNDWYYFDNIGKMQTSWQDIDNSTYYFNDNGVMSIGWRTIESEWYYFNNSGAKESNKVIDDWYLDKNGVGNQIVTEG
VYGKSGNGRDLEYYRIGHGKKVLFSVFGVHGYEDAWSGDSQELKIIAEKSVNRLRSEYNTKGIDLSEWSVYIIPSANPDG
RIDGWTNNGPGRTTVTTKNDINRSFPTGFSPFYSARNYTGPTALGSPEAKALYGFINKTMEGATEKVLLDVHGWENKTIG
NPSIARYFDNEFGFRNINKYPGGFVITYGNAIGAKSVLVEFPVPYSHQDILRRDFSGKFANGLVNILLNN

Specific function: May function as an ionophore [H]

COG id: COG5263

COG function: function code R; FOG: Glucan-binding domain (YG repeat)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF00246 Peptidase_M14; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 63368; Mature: 63368

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKSIALVLSLGLLGSVTLGSIETVYAEGNKNTTNISEVKVDNKVELSDKKNKEIKNGW
CCCCCEEEEEEHHHHCCEEECCEEEEEECCCCCCCCEEEEEECCEEECCCCCCCHHHCCC
EIINDKWYYHESDGSLATGFKKINDEWYRFDNNGEMQVGWQYINDIWYHFRDNGPMDTGW
EEECCEEEEECCCCCHHHHHHHHCCCCEEECCCCCEEEHHHHHHHHHEEECCCCCCCCCC
RKINNDWYYFNNDGEMQTGWQSIGNKRYHFRDNGVMDTGWRSLGSDWYLLNSDGEMQTGW
EEECCCEEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHCCCCEEEECCCCCCHHHH
QHINNIWYHLEDDGKMNTGWQDINGDKYYFNNSGEMQTGWQYINDIWYHLRENGPADTGW
HHHCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
RKINNDWYYFDNIGKMQTSWQDIDNSTYYFNDNGVMSIGWRTIESEWYYFNNSGAKESNK
EEECCCEEEECCCCCCCCCHHCCCCCEEEECCCCEEEEEEEEEECEEEEEECCCCCCCCC
VIDDWYLDKNGVGNQIVTEGVYGKSGNGRDLEYYRIGHGKKVLFSVFGVHGYEDAWSGDS
CEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEHHHCCCCCCCCCCCCC
QELKIIAEKSVNRLRSEYNTKGIDLSEWSVYIIPSANPDGRIDGWTNNGPGRTTVTTKND
CCEEEEHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
INRSFPTGFSPFYSARNYTGPTALGSPEAKALYGFINKTMEGATEKVLLDVHGWENKTIG
CCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
NPSIARYFDNEFGFRNINKYPGGFVITYGNAIGAKSVLVEFPVPYSHQDILRRDFSGKFA
CCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCHHH
NGLVNILLNN
CCEEEEEECC
>Mature Secondary Structure
MKRKSIALVLSLGLLGSVTLGSIETVYAEGNKNTTNISEVKVDNKVELSDKKNKEIKNGW
CCCCCEEEEEEHHHHCCEEECCEEEEEECCCCCCCCEEEEEECCEEECCCCCCCHHHCCC
EIINDKWYYHESDGSLATGFKKINDEWYRFDNNGEMQVGWQYINDIWYHFRDNGPMDTGW
EEECCEEEEECCCCCHHHHHHHHCCCCEEECCCCCEEEHHHHHHHHHEEECCCCCCCCCC
RKINNDWYYFNNDGEMQTGWQSIGNKRYHFRDNGVMDTGWRSLGSDWYLLNSDGEMQTGW
EEECCCEEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHCCCCEEEECCCCCCHHHH
QHINNIWYHLEDDGKMNTGWQDINGDKYYFNNSGEMQTGWQYINDIWYHLRENGPADTGW
HHHCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
RKINNDWYYFDNIGKMQTSWQDIDNSTYYFNDNGVMSIGWRTIESEWYYFNNSGAKESNK
EEECCCEEEECCCCCCCCCHHCCCCCEEEECCCCEEEEEEEEEECEEEEEECCCCCCCCC
VIDDWYLDKNGVGNQIVTEGVYGKSGNGRDLEYYRIGHGKKVLFSVFGVHGYEDAWSGDS
CEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEHHHCCCCCCCCCCCCC
QELKIIAEKSVNRLRSEYNTKGIDLSEWSVYIIPSANPDGRIDGWTNNGPGRTTVTTKND
CCEEEEHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
INRSFPTGFSPFYSARNYTGPTALGSPEAKALYGFINKTMEGATEKVLLDVHGWENKTIG
CCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
NPSIARYFDNEFGFRNINKYPGGFVITYGNAIGAKSVLVEFPVPYSHQDILRRDFSGKFA
CCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCHHH
NGLVNILLNN
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2901768; 2877971; 2460717 [H]