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The map label for this gene is rsmI [H]

Identifier: 182682197

GI number: 182682197

Start: 1852865

End: 1853686

Strand: Direct

Name: rsmI [H]

Synonym: XfasM23_1676

Alternate gene names: 182682197

Gene position: 1852865-1853686 (Clockwise)

Preceding gene: 182682193

Following gene: 182682198

Centisome position: 73.07

GC content: 58.39

Gene sequence:

>822_bases
ATGTCCACACCAGGCACGCTCCATATCGTCGCAACCCCCATCGGCAACCTGGGCGACCTATCGCCACGCGCCCAGCACAT
CCTGCGCACCGTCACCATGATATGTGCCGAAGACACCCGGCATACCCGGCAACTGCTGGCCCACTTTGGAATTGAACGGC
CCCTATTGGCACTACACGCGCACAACGAAGACACGCTGGCCGAGCGGATCATCACCCGATTGATCAGCGGCGAATCACTG
GCCCTGGTCAGCGATGCCGGTACACCACTGATCAGCGATCCGGGCTTTCTCCTGGTCCGTGCTGCACGTGCGGCTGGAAT
TCGGGTGACCCCAGTGCCAGGACCAAGCGCATTAATTGCCGCCCTGAGTGTCTCCGGCCTACCTAGCAACCGCTTTACCT
TCGAAGGCTTCCTCCCAGCCAAACCAACGGCACGGCGCGACCGCCTGACACACCTGGCGCATGAACCACGCACCCTCATC
TTTTACGAAGCATCACACCGTATCGCCGAGTGTCTGACAGACCTAGCAACCATCTTCGGCAGCATGCGTATAGCAGTGGT
TGCACGCGAACTCACCAAGATATTTGAAACCGTACTTGACGGTACCTTGGCGACCTTACAAACACAGGTGGCCAACGACG
AAAACCAGCGTAAAGGAGAGTTTGTAATTATCGTACAAGGTGCCGCCGATCAGGATGCCGCCAAGATCACCGAAGGACGC
CGTATCTACGCACTGCTTAAAGAACACCTGCCCCCTTCAAGTGCTGCCAAACTCGCCGCAGAAATCACCGGCGCTCCACG
CAAGGCACTGTACGGCGGCTGA

Upstream 100 bases:

>100_bases
TTGCAAAACGCGGGTTCATTGAGCATCCATACAGCAAGGCCCACCGAAGCGGGCAGGTGAAAAACGCTACGATTTTACTC
TTCCCAAAAAATATCCGCCG

Downstream 100 bases:

>100_bases
CATCCATTGTCCCTCGATTTCTGACCTTTCCTAAGGACATTCATTCCGATCAGGAAAGTCACGCCGTAACACACTGCACA
TCAGAAAGGTAAACCCATGA

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSTPGTLHIVATPIGNLGDLSPRAQHILRTVTMICAEDTRHTRQLLAHFGIERPLLALHAHNEDTLAERIITRLISGESL
ALVSDAGTPLISDPGFLLVRAARAAGIRVTPVPGPSALIAALSVSGLPSNRFTFEGFLPAKPTARRDRLTHLAHEPRTLI
FYEASHRIAECLTDLATIFGSMRIAVVARELTKIFETVLDGTLATLQTQVANDENQRKGEFVIIVQGAADQDAAKITEGR
RIYALLKEHLPPSSAAKLAAEITGAPRKALYGG

Sequences:

>Translated_273_residues
MSTPGTLHIVATPIGNLGDLSPRAQHILRTVTMICAEDTRHTRQLLAHFGIERPLLALHAHNEDTLAERIITRLISGESL
ALVSDAGTPLISDPGFLLVRAARAAGIRVTPVPGPSALIAALSVSGLPSNRFTFEGFLPAKPTARRDRLTHLAHEPRTLI
FYEASHRIAECLTDLATIFGSMRIAVVARELTKIFETVLDGTLATLQTQVANDENQRKGEFVIIVQGAADQDAAKITEGR
RIYALLKEHLPPSSAAKLAAEITGAPRKALYGG
>Mature_272_residues
STPGTLHIVATPIGNLGDLSPRAQHILRTVTMICAEDTRHTRQLLAHFGIERPLLALHAHNEDTLAERIITRLISGESLA
LVSDAGTPLISDPGFLLVRAARAAGIRVTPVPGPSALIAALSVSGLPSNRFTFEGFLPAKPTARRDRLTHLAHEPRTLIF
YEASHRIAECLTDLATIFGSMRIAVVARELTKIFETVLDGTLATLQTQVANDENQRKGEFVIIVQGAADQDAAKITEGRR
IYALLKEHLPPSSAAKLAAEITGAPRKALYGG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=270, Percent_Identity=53.3333333333333, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29362; Mature: 29231

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPGTLHIVATPIGNLGDLSPRAQHILRTVTMICAEDTRHTRQLLAHFGIERPLLALHA
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
HNEDTLAERIITRLISGESLALVSDAGTPLISDPGFLLVRAARAAGIRVTPVPGPSALIA
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEHHHHCCEEEECCCCHHHHHH
ALSVSGLPSNRFTFEGFLPAKPTARRDRLTHLAHEPRTLIFYEASHRIAECLTDLATIFG
HHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHH
SMRIAVVARELTKIFETVLDGTLATLQTQVANDENQRKGEFVIIVQGAADQDAAKITEGR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHCCH
RIYALLKEHLPPSSAAKLAAEITGAPRKALYGG
HHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
STPGTLHIVATPIGNLGDLSPRAQHILRTVTMICAEDTRHTRQLLAHFGIERPLLALHA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
HNEDTLAERIITRLISGESLALVSDAGTPLISDPGFLLVRAARAAGIRVTPVPGPSALIA
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEHHHHCCEEEECCCCHHHHHH
ALSVSGLPSNRFTFEGFLPAKPTARRDRLTHLAHEPRTLIFYEASHRIAECLTDLATIFG
HHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHH
SMRIAVVARELTKIFETVLDGTLATLQTQVANDENQRKGEFVIIVQGAADQDAAKITEGR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHCCH
RIYALLKEHLPPSSAAKLAAEITGAPRKALYGG
HHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]