| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is hisH
Identifier: 182681881
GI number: 182681881
Start: 1487348
End: 1487950
Strand: Reverse
Name: hisH
Synonym: XfasM23_1349
Alternate gene names: 182681881
Gene position: 1487950-1487348 (Counterclockwise)
Preceding gene: 182681882
Following gene: 182681880
Centisome position: 58.68
GC content: 61.36
Gene sequence:
>603_bases ATGACCGAGGTTGCTTTGATTGATGCCGGTGGTGCCAATCTTGGTTCGGTGCGCTACGCCTTGCAGCGTTTGGGGGTAGA ACCGCGCTTAGTGTGCGATGCCCGCGGACTGGAGGGGGCTGCGCGGGTGATTCTCCCCGGGGTCGGGAGCGCACCTGAAG CGATGGCACGGCTCAACAATCAAGGCTTGATTGAGCCATTGCTCCGGCTACAGGTGCCGCTGATTGGGATCTGCCTGGGC ATGCAATTGTTGTTTGAGCACTCTGAGGAAGGCGATGTGCCCTGCTTGGGATTGCTGCCTGGCCGCGTCCGCCGCCTGAC GCCGGCTCCTAGCATCCGTGTGCCGCACATGGGCTGGAATCGCTTGTTGCCGCTGCGCGCTTCGCCATTGCTGGCGGAGG TGCCCGAGGGGGCGAACGCTTATTTTGTGCATAGCTATGCAGTGCCCTTGACCACGGCAGCGGTGGCCGCCTGCGATCAC GGCGGCATGTTTACCGCGATTGTGCAGCAGGGAGTGCGTTGTGGCGCGCAATTCCATCCAGAGCGTTCGGCCGAAACAGG CGCACGTATCCTGCGTAATTTTCTTGAAATGGATGCCGCATGA
Upstream 100 bases:
>100_bases ACCATCACAAAGTAGAAGCGTGTTTCAAGGCGCTGGCGCGTGCATTGCGTCAGGCGTTACAACGCCACGGCCACGTGCTT CCTTCTACCAAGGGGGCGTT
Downstream 100 bases:
>100_bases ATTTCATTGTCTATCCAGCCTTGGACATCCGTAACGGTGCTGTGGTGCGTCTCCAGCAGGGGGATTACGCGCGCCAGACG CGCTATGACGATCAGGTATT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTEVALIDAGGANLGSVRYALQRLGVEPRLVCDARGLEGAARVILPGVGSAPEAMARLNNQGLIEPLLRLQVPLIGICLG MQLLFEHSEEGDVPCLGLLPGRVRRLTPAPSIRVPHMGWNRLLPLRASPLLAEVPEGANAYFVHSYAVPLTTAAVAACDH GGMFTAIVQQGVRCGAQFHPERSAETGARILRNFLEMDAA
Sequences:
>Translated_200_residues MTEVALIDAGGANLGSVRYALQRLGVEPRLVCDARGLEGAARVILPGVGSAPEAMARLNNQGLIEPLLRLQVPLIGICLG MQLLFEHSEEGDVPCLGLLPGRVRRLTPAPSIRVPHMGWNRLLPLRASPLLAEVPEGANAYFVHSYAVPLTTAAVAACDH GGMFTAIVQQGVRCGAQFHPERSAETGARILRNFLEMDAA >Mature_199_residues TEVALIDAGGANLGSVRYALQRLGVEPRLVCDARGLEGAARVILPGVGSAPEAMARLNNQGLIEPLLRLQVPLIGICLGM QLLFEHSEEGDVPCLGLLPGRVRRLTPAPSIRVPHMGWNRLLPLRASPLLAEVPEGANAYFVHSYAVPLTTAAVAACDHG GMFTAIVQQGVRCGAQFHPERSAETGARILRNFLEMDAA
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=196, Percent_Identity=43.3673469387755, Blast_Score=159, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6319725, Length=216, Percent_Identity=30.0925925925926, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 21288; Mature: 21157
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVALIDAGGANLGSVRYALQRLGVEPRLVCDARGLEGAARVILPGVGSAPEAMARLNN CCEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHCC QGLIEPLLRLQVPLIGICLGMQLLFEHSEEGDVPCLGLLPGRVRRLTPAPSIRVPHMGWN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCCCEECCCCCCC RLLPLRASPLLAEVPEGANAYFVHSYAVPLTTAAVAACDHGGMFTAIVQQGVRCGAQFHP CCCCCCCCCHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC ERSAETGARILRNFLEMDAA CCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEVALIDAGGANLGSVRYALQRLGVEPRLVCDARGLEGAARVILPGVGSAPEAMARLNN CEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHCC QGLIEPLLRLQVPLIGICLGMQLLFEHSEEGDVPCLGLLPGRVRRLTPAPSIRVPHMGWN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCCCEECCCCCCC RLLPLRASPLLAEVPEGANAYFVHSYAVPLTTAAVAACDHGGMFTAIVQQGVRCGAQFHP CCCCCCCCCHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC ERSAETGARILRNFLEMDAA CCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]