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The map label for this gene is 182681852

Identifier: 182681852

GI number: 182681852

Start: 1450683

End: 1451291

Strand: Reverse

Name: 182681852

Synonym: XfasM23_1317

Alternate gene names: NA

Gene position: 1451291-1450683 (Counterclockwise)

Preceding gene: 182681853

Following gene: 182681849

Centisome position: 57.23

GC content: 42.04

Gene sequence:

>609_bases
ATGATTACTTTAATTTTGATTGCTATGAATGCGGTGGTGTCCTGGTTGGCTTTCAATAATAGTCGTTTGCTTGATCGGTT
GGTTTTTTGGCCTCCGGCGATTGATCGTGATCACCAATATGATCGGTTGATTACGTATGGTTTTGTACATGCCGATATTT
CGCATTTATTGTTCAATATGGTGACGTTATATTTTTTTGGCAGCATGATTGAAGCCGTCATGGGCGAACTTACTGGGAGT
CTATTGACTTATCCTTTGTTTTATTTAGGGGCGTTGTTGGTATCGATTTTGCCTAGTTATATTAAGAACCAGAAAAATCC
AAAGTATCTGAGTCTTGGTGCTTCAGGCGCTGTGTCGGCTGTGTTGTTCGCCGCGGTATTGTTGCAGCCTTGGGCCTTAA
TTGTTGTGCTGTTTATTCCTGCGCCTGCGATTTTTTATGCTGTTTTTTATGTTGGGTATAGTATTTGGATGGGGCGTCGC
GGTGATGATGGAATTAATCATAGTGCACATCTTTCCGGTGCTGCTTTTGGTGTGGTGTTTATGTTGTGTATGGAGCCGCA
GTTGTTGCAGGTATTTTTGATGCAATTAACCATGCCACGTTTTGGTTGA

Upstream 100 bases:

>100_bases
GTGCGCTGTTGCATCGTCGATTATTATTTTTTTTTTTTGAGTATTGGTGGCGTGTCGTTTCGAGTGCCTGTAAGGTTATT
TCACCATTTTGGACTGTTTG

Downstream 100 bases:

>100_bases
GTTGACGTGCTGGGTGTTTTGATCCGGGGATGTGTAATGAGGTAGCCGCATGTTTGCGGGCAAGGACGGTGTGCTTTGGA
TGGCTGGATCGGCATATGTA

Product: rhomboid family protein

Products: NA

Alternate protein names: Rhomboid-Like Protein; Peptidase; S54 Family Peptidase; Transmembrane Rhomboid Family Protein; Cytoplasmic Membrane Protein; Integral Membrane Protein; Intramembrane Protease

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MITLILIAMNAVVSWLAFNNSRLLDRLVFWPPAIDRDHQYDRLITYGFVHADISHLLFNMVTLYFFGSMIEAVMGELTGS
LLTYPLFYLGALLVSILPSYIKNQKNPKYLSLGASGAVSAVLFAAVLLQPWALIVVLFIPAPAIFYAVFYVGYSIWMGRR
GDDGINHSAHLSGAAFGVVFMLCMEPQLLQVFLMQLTMPRFG

Sequences:

>Translated_202_residues
MITLILIAMNAVVSWLAFNNSRLLDRLVFWPPAIDRDHQYDRLITYGFVHADISHLLFNMVTLYFFGSMIEAVMGELTGS
LLTYPLFYLGALLVSILPSYIKNQKNPKYLSLGASGAVSAVLFAAVLLQPWALIVVLFIPAPAIFYAVFYVGYSIWMGRR
GDDGINHSAHLSGAAFGVVFMLCMEPQLLQVFLMQLTMPRFG
>Mature_202_residues
MITLILIAMNAVVSWLAFNNSRLLDRLVFWPPAIDRDHQYDRLITYGFVHADISHLLFNMVTLYFFGSMIEAVMGELTGS
LLTYPLFYLGALLVSILPSYIKNQKNPKYLSLGASGAVSAVLFAAVLLQPWALIVVLFIPAPAIFYAVFYVGYSIWMGRR
GDDGINHSAHLSGAAFGVVFMLCMEPQLLQVFLMQLTMPRFG

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22578; Mature: 22578

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLILIAMNAVVSWLAFNNSRLLDRLVFWPPAIDRDHQYDRLITYGFVHADISHLLFNM
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VTLYFFGSMIEAVMGELTGSLLTYPLFYLGALLVSILPSYIKNQKNPKYLSLGASGAVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHH
VLFAAVLLQPWALIVVLFIPAPAIFYAVFYVGYSIWMGRRGDDGINHSAHLSGAAFGVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
MLCMEPQLLQVFLMQLTMPRFG
HHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MITLILIAMNAVVSWLAFNNSRLLDRLVFWPPAIDRDHQYDRLITYGFVHADISHLLFNM
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VTLYFFGSMIEAVMGELTGSLLTYPLFYLGALLVSILPSYIKNQKNPKYLSLGASGAVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHH
VLFAAVLLQPWALIVVLFIPAPAIFYAVFYVGYSIWMGRRGDDGINHSAHLSGAAFGVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
MLCMEPQLLQVFLMQLTMPRFG
HHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA