| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681814
Identifier: 182681814
GI number: 182681814
Start: 1406941
End: 1407609
Strand: Reverse
Name: 182681814
Synonym: XfasM23_1278
Alternate gene names: NA
Gene position: 1407609-1406941 (Counterclockwise)
Preceding gene: 182681827
Following gene: 182681812
Centisome position: 55.51
GC content: 51.27
Gene sequence:
>669_bases ATGTCGAGTCCTGTTGTGGAGATCCAGATATGGTCGGATCTGATCTGTCCTTGGTGCTGGATTGGCAAGCGGCGTTTGGA GCGCGCCCTCCGCAATTCATCATTGTTTGCCGACATCAAAGTACGTCACCGCGCATTCCGATTAATGCCGGAACTGATTC CCCTTCCAGTGATTGACGTACTCCAGCAGCGTTATGGTGGTTCCGCCGAACAGATTGTGGCAATACAGCAACGTATTGAG AAAATTGCTGCCGAAGAAAGCTTAATATATCGATTGGTTGGTACTCAGGGCGCAGATACCCTGCAGGCACACCGCTTGTT GTATTTGGCGCACCGCCAGGGATTGCAAGAAGTCCTTTTGGAGCGCTTTTACAGCGCTTATTTCAGCGAAGGAACTCCCA TATTTGATACTGATACTTTGGCGCCTTTAGCGCTTGACGTGGGATTGGAGCGCACAGCAGTTGCCGCATTATTTGCTGGT CAAGATTTTATCGCTGAGATAGAGGATGATCAGCGCCGCTTGCAGCGTTACGGTGCAAACGGTGTCCCATTTTTCCTGAT GGATGGGCGTATTGCAGTGAATGGTGCCCAGCCAATAGAGGCGTTCTCAGATGCACTGGCCCAGTTGAATGCCGATGCGG CATCGCAATCGGCATTCTTCCTGCGTTGA
Upstream 100 bases:
>100_bases CCGTACGTATCCTTTACAGACTATCCTCGCGATCTGGAGATGGCATGTCCCTGATTGGATCGTGTCTACTTCTCTACTGA TATTTTTAAGGAATGTCGCA
Downstream 100 bases:
>100_bases TGACTGCAACGCGATGCGATACCTAAGCAGAGCATCACGCGTTTTGAAGATGCACCTGATTCCCGTCAAGCAGCGTCTGG CCGCGGCGCTTACCAACTGT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Dsba Oxidoreductase; Dithiol-Disulfide Isomerase; FrnE Protein; Protein Dithiol-Disulfide Isomerase; Protein-Disulfide Isomerase; Polyketide Biosynthesis Associated Protein; Polyketide Synthase; DSBA-Like Thioredoxin Domain-Containing Protein; Thiol Oxidoreductase FrnE; Oxidoreductase; DsbA Oxidoreductase; Thioredoxin Domain Protein DsbA Family; Thioredoxin Domain-Containing Protein; Isomerase; DSBA-Like Thioredoxin Domain; Dsb Family Thioredoxin Protein; Protein Disulfide-Isomerase; Protein Disulfide Isomerase; Peptidoglycan Hydrolase; Dsba Oxidoreductase Family Protein; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; Dithiol-Disulfide Isomerase Protein; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; Disulfide Isomerase; DSBA-Like Thioredoxin Family Protein; Protein-Disulfide Isomerase DsbC/DsbG; Thiol Oxidoreductase; DsbA Family Oxidoreductase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSSPVVEIQIWSDLICPWCWIGKRRLERALRNSSLFADIKVRHRAFRLMPELIPLPVIDVLQQRYGGSAEQIVAIQQRIE KIAAEESLIYRLVGTQGADTLQAHRLLYLAHRQGLQEVLLERFYSAYFSEGTPIFDTDTLAPLALDVGLERTAVAALFAG QDFIAEIEDDQRRLQRYGANGVPFFLMDGRIAVNGAQPIEAFSDALAQLNADAASQSAFFLR
Sequences:
>Translated_222_residues MSSPVVEIQIWSDLICPWCWIGKRRLERALRNSSLFADIKVRHRAFRLMPELIPLPVIDVLQQRYGGSAEQIVAIQQRIE KIAAEESLIYRLVGTQGADTLQAHRLLYLAHRQGLQEVLLERFYSAYFSEGTPIFDTDTLAPLALDVGLERTAVAALFAG QDFIAEIEDDQRRLQRYGANGVPFFLMDGRIAVNGAQPIEAFSDALAQLNADAASQSAFFLR >Mature_221_residues SSPVVEIQIWSDLICPWCWIGKRRLERALRNSSLFADIKVRHRAFRLMPELIPLPVIDVLQQRYGGSAEQIVAIQQRIEK IAAEESLIYRLVGTQGADTLQAHRLLYLAHRQGLQEVLLERFYSAYFSEGTPIFDTDTLAPLALDVGLERTAVAALFAGQ DFIAEIEDDQRRLQRYGANGVPFFLMDGRIAVNGAQPIEAFSDALAQLNADAASQSAFFLR
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24922; Mature: 24791
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPVVEIQIWSDLICPWCWIGKRRLERALRNSSLFADIKVRHRAFRLMPELIPLPVIDV CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH LQQRYGGSAEQIVAIQQRIEKIAAEESLIYRLVGTQGADTLQAHRLLYLAHRQGLQEVLL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ERFYSAYFSEGTPIFDTDTLAPLALDVGLERTAVAALFAGQDFIAEIEDDQRRLQRYGAN HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC GVPFFLMDGRIAVNGAQPIEAFSDALAQLNADAASQSAFFLR CCEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SSPVVEIQIWSDLICPWCWIGKRRLERALRNSSLFADIKVRHRAFRLMPELIPLPVIDV CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH LQQRYGGSAEQIVAIQQRIEKIAAEESLIYRLVGTQGADTLQAHRLLYLAHRQGLQEVLL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ERFYSAYFSEGTPIFDTDTLAPLALDVGLERTAVAALFAGQDFIAEIEDDQRRLQRYGAN HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC GVPFFLMDGRIAVNGAQPIEAFSDALAQLNADAASQSAFFLR CCEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA