| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681796
Identifier: 182681796
GI number: 182681796
Start: 1390662
End: 1391492
Strand: Reverse
Name: 182681796
Synonym: XfasM23_1257
Alternate gene names: NA
Gene position: 1391492-1390662 (Counterclockwise)
Preceding gene: 182681797
Following gene: 182681795
Centisome position: 54.88
GC content: 58.24
Gene sequence:
>831_bases ATGAAACAGTTTGGCCGCCAGTATCGCCTGGAGCTGGGGTCCAGCCACGATGGGATTGCCATCGACACCCTGCGCATCGC CTTTGACATCCGTAAAACCAGCGACTCCACCCCCAACCCCGCCAAGATCACCGTCTGGAATCTCAACCGCGATCACCTGA GCTTGCTCACCAGCCGACAGTACAACAGGGTCCGGCTACTCGCCGGTTATGCCGACCTGCGCCTGTTATTTGTCGGTGAC ATCATCAAGCCTTCTGTGAGACGCGATGGAACCGATTACATCATTGAACTGGAATGCGGCGATGGCGATCACGACTACCG CCATGGGCATGTTTGCTTATCGTTGGCCGCAGGGGCGACCGATGCCCAGGTACTGCGGGCACTGAGTACCTCCATGCCGT CTACCCGGCTGGGACCTATCCAGATGCAGGGACAACGTGGCTTGACCCGCGGCAAAGTCCTGTCGGGCAATACCCGCGAC CTGCTGGATGCAATGGCCAACAATCATGGTGCGGACTGGTCCATCCAGGATGGCGCACTGATGTTACTGCCTGCCGATAC CGTCCTGGCCGGTGACGCCGTGCTGCTGTCTCAAAGCAGCGGCATGATTGGCTCCCCCGAAGTGACCGATGATGGATTAA AAATCACCACCTTGCTCAATCCGGCCTTGCGCATCGGCGGCCTGGTGCGCGTGGACTCGATCATCCCTATCTACAACGGC GACTACAAAATCACCTCACTGCAAGACATGGGCGATGTCATGGCCGAAGCCTGGTTCAGTACGGTGACCTGTGTGGGCGG TGATTTTCAGAACGTGAGGCCGTCTGTATGA
Upstream 100 bases:
>100_bases GGCTGACAGATGAAAGCGGTTTAGAGATGGACCCGATGCGCCACGATGACCTGGGCGAACGCTGCTTGCTGTTTGTTGGA TTAAAAGAGCAGGTCCGCCC
Downstream 100 bases:
>100_bases GTCTGGATGACTGGAATAACGCCTCCCTCAGTGCCGTACTGCAACGCAGTACCGAAGCGCTGGCCCAGCGCCTGCGTGTG GCCTTGCCTGGGCAGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKQFGRQYRLELGSSHDGIAIDTLRIAFDIRKTSDSTPNPAKITVWNLNRDHLSLLTSRQYNRVRLLAGYADLRLLFVGD IIKPSVRRDGTDYIIELECGDGDHDYRHGHVCLSLAAGATDAQVLRALSTSMPSTRLGPIQMQGQRGLTRGKVLSGNTRD LLDAMANNHGADWSIQDGALMLLPADTVLAGDAVLLSQSSGMIGSPEVTDDGLKITTLLNPALRIGGLVRVDSIIPIYNG DYKITSLQDMGDVMAEAWFSTVTCVGGDFQNVRPSV
Sequences:
>Translated_276_residues MKQFGRQYRLELGSSHDGIAIDTLRIAFDIRKTSDSTPNPAKITVWNLNRDHLSLLTSRQYNRVRLLAGYADLRLLFVGD IIKPSVRRDGTDYIIELECGDGDHDYRHGHVCLSLAAGATDAQVLRALSTSMPSTRLGPIQMQGQRGLTRGKVLSGNTRD LLDAMANNHGADWSIQDGALMLLPADTVLAGDAVLLSQSSGMIGSPEVTDDGLKITTLLNPALRIGGLVRVDSIIPIYNG DYKITSLQDMGDVMAEAWFSTVTCVGGDFQNVRPSV >Mature_276_residues MKQFGRQYRLELGSSHDGIAIDTLRIAFDIRKTSDSTPNPAKITVWNLNRDHLSLLTSRQYNRVRLLAGYADLRLLFVGD IIKPSVRRDGTDYIIELECGDGDHDYRHGHVCLSLAAGATDAQVLRALSTSMPSTRLGPIQMQGQRGLTRGKVLSGNTRD LLDAMANNHGADWSIQDGALMLLPADTVLAGDAVLLSQSSGMIGSPEVTDDGLKITTLLNPALRIGGLVRVDSIIPIYNG DYKITSLQDMGDVMAEAWFSTVTCVGGDFQNVRPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29998; Mature: 29998
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFGRQYRLELGSSHDGIAIDTLRIAFDIRKTSDSTPNPAKITVWNLNRDHLSLLTSRQ CCCCCCHHEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHCC YNRVRLLAGYADLRLLFVGDIIKPSVRRDGTDYIIELECGDGDHDYRHGHVCLSLAAGAT CCEEEEEECCCCEEEEEECCCCCCHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCC DAQVLRALSTSMPSTRLGPIQMQGQRGLTRGKVLSGNTRDLLDAMANNHGADWSIQDGAL HHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEECCCEE MLLPADTVLAGDAVLLSQSSGMIGSPEVTDDGLKITTLLNPALRIGGLVRVDSIIPIYNG EEEECCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHCCEEEEEEEEEEECC DYKITSLQDMGDVMAEAWFSTVTCVGGDFQNVRPSV CEEEEEHHHHHHHHHHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure MKQFGRQYRLELGSSHDGIAIDTLRIAFDIRKTSDSTPNPAKITVWNLNRDHLSLLTSRQ CCCCCCHHEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHCC YNRVRLLAGYADLRLLFVGDIIKPSVRRDGTDYIIELECGDGDHDYRHGHVCLSLAAGAT CCEEEEEECCCCEEEEEECCCCCCHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCC DAQVLRALSTSMPSTRLGPIQMQGQRGLTRGKVLSGNTRDLLDAMANNHGADWSIQDGAL HHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEECCCEE MLLPADTVLAGDAVLLSQSSGMIGSPEVTDDGLKITTLLNPALRIGGLVRVDSIIPIYNG EEEECCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHCCEEEEEEEEEEECC DYKITSLQDMGDVMAEAWFSTVTCVGGDFQNVRPSV CEEEEEHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA