| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is yefJ [C]
Identifier: 182681761
GI number: 182681761
Start: 1351558
End: 1352385
Strand: Reverse
Name: yefJ [C]
Synonym: XfasM23_1219
Alternate gene names: 182681761
Gene position: 1352385-1351558 (Counterclockwise)
Preceding gene: 182681762
Following gene: 182681760
Centisome position: 53.33
GC content: 55.19
Gene sequence:
>828_bases ATGGCTGCGGTAGTGGTCACCTTCCAGAGTGGCAGCACCATTGATGTTTGTTTGGCGCGCTTGCGCGCTGCTAAGGATGT AGCCGAGATTTGTGTGGTCGATAATGGCTCGCACGATGAGACTTTGAATATTGTGCAGTGCCATGCTTTGGCCGACCCAC GTGTACGTTTTGTTGCCAACCTCGATAATCCTGGGTTTGCTGCCGCTTGTAACCAAGGTGCTGCTGATGTCAGTGCCCCA TGGTTGGTTTTTGTCAATCCGGATCTGATGGTTGAGCCGGAGATCTTGGCACAGCTACGTGCATATGCTGAGGTGTATGT CCCAGCGTTGCTAGGCGTGGAGCAGGTCGATGAACATGGGTATCCGGATCCTGCAGTACGCCGACGTGATCCCGATTTTG CGGCGATGCTGCGCAATCCGCGACGCGGGACACAACTGGCAATCCCTGCTGATCCGACTCAGTCACTGCAACTGGTACCG GCATTGTCCGGTGCATTGATGTTGATGTCGCGTTTGCTGTTTGAGCGTCTTGGTGGCTGGGATGTGGGGTATCGATTGCA TGCCGAGGACTTGGACTTGTGCCGACGTGCGCGCCAGGTTGGTGCTACTGTCGCGGTGGTCAATACATTGCAGGTAGTAC ATCTGCGTGGTGTTTCCAGTCGTTCGCGGCCTTTTTTCGTCGAGTGGCATAAACATTGTGGGCTATGGCGGTACTTCTGT AAGTTCGAAGCGCCGCAGCGCGGGTTACCGGTACGTTTAGGGGTCTGGCTTGCGATCTGGAGTCATGCTTTCTTCCAGTG TCTGGGTGTGTGGCTGCGTCGGCGTTAA
Upstream 100 bases:
>100_bases AACGTCGCAAATGTCGGCAACCATTTTTAATTGAAGGTTATGCATGGATGACTCAGCAGGCCATTCGGGCGAGGATAATG CGCTGATGGAGAAACATTTC
Downstream 100 bases:
>100_bases CTAGTGATACGGCATTGTGTGGTTATTACTTACTATGCTGCGGTGCAACAGTCAGTGCCAGCGACTCGCAGCGGATGCAC CCAGCATCGCTTTCTATTAG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Protein; Rhamnosyl Transferase; Glycosyltransferase/Rhamnosyltransferase; Glycosyl Transferase Family 2 Protein; Family 2 Glycosyltransferase; DTDP-Rhamnosyl Transferase; B-Glycosyltransferase; Glycosyl Transferase Group 1/2 Family Protein; Glycosyl Transferase Group 2 Family
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MAAVVVTFQSGSTIDVCLARLRAAKDVAEICVVDNGSHDETLNIVQCHALADPRVRFVANLDNPGFAAACNQGAADVSAP WLVFVNPDLMVEPEILAQLRAYAEVYVPALLGVEQVDEHGYPDPAVRRRDPDFAAMLRNPRRGTQLAIPADPTQSLQLVP ALSGALMLMSRLLFERLGGWDVGYRLHAEDLDLCRRARQVGATVAVVNTLQVVHLRGVSSRSRPFFVEWHKHCGLWRYFC KFEAPQRGLPVRLGVWLAIWSHAFFQCLGVWLRRR
Sequences:
>Translated_275_residues MAAVVVTFQSGSTIDVCLARLRAAKDVAEICVVDNGSHDETLNIVQCHALADPRVRFVANLDNPGFAAACNQGAADVSAP WLVFVNPDLMVEPEILAQLRAYAEVYVPALLGVEQVDEHGYPDPAVRRRDPDFAAMLRNPRRGTQLAIPADPTQSLQLVP ALSGALMLMSRLLFERLGGWDVGYRLHAEDLDLCRRARQVGATVAVVNTLQVVHLRGVSSRSRPFFVEWHKHCGLWRYFC KFEAPQRGLPVRLGVWLAIWSHAFFQCLGVWLRRR >Mature_274_residues AAVVVTFQSGSTIDVCLARLRAAKDVAEICVVDNGSHDETLNIVQCHALADPRVRFVANLDNPGFAAACNQGAADVSAPW LVFVNPDLMVEPEILAQLRAYAEVYVPALLGVEQVDEHGYPDPAVRRRDPDFAAMLRNPRRGTQLAIPADPTQSLQLVPA LSGALMLMSRLLFERLGGWDVGYRLHAEDLDLCRRARQVGATVAVVNTLQVVHLRGVSSRSRPFFVEWHKHCGLWRYFCK FEAPQRGLPVRLGVWLAIWSHAFFQCLGVWLRRR
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30647; Mature: 30516
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVVVTFQSGSTIDVCLARLRAAKDVAEICVVDNGSHDETLNIVQCHALADPRVRFVAN CEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEECCCCCEEEEEE LDNPGFAAACNQGAADVSAPWLVFVNPDLMVEPEILAQLRAYAEVYVPALLGVEQVDEHG CCCCCCHHHCCCCCCCCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHCHHHHHHCC YPDPAVRRRDPDFAAMLRNPRRGTQLAIPADPTQSLQLVPALSGALMLMSRLLFERLGGW CCCCHHCCCCCCHHHHHCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC DVGYRLHAEDLDLCRRARQVGATVAVVNTLQVVHLRGVSSRSRPFFVEWHKHCGLWRYFC CCCEEECHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCCEEEEEHHHCCHHHHHH KFEAPQRGLPVRLGVWLAIWSHAFFQCLGVWLRRR HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAVVVTFQSGSTIDVCLARLRAAKDVAEICVVDNGSHDETLNIVQCHALADPRVRFVAN EEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEECCCCCEEEEEE LDNPGFAAACNQGAADVSAPWLVFVNPDLMVEPEILAQLRAYAEVYVPALLGVEQVDEHG CCCCCCHHHCCCCCCCCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHCHHHHHHCC YPDPAVRRRDPDFAAMLRNPRRGTQLAIPADPTQSLQLVPALSGALMLMSRLLFERLGGW CCCCHHCCCCCCHHHHHCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC DVGYRLHAEDLDLCRRARQVGATVAVVNTLQVVHLRGVSSRSRPFFVEWHKHCGLWRYFC CCCEEECHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCCEEEEEHHHCCHHHHHH KFEAPQRGLPVRLGVWLAIWSHAFFQCLGVWLRRR HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA