| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681714
Identifier: 182681714
GI number: 182681714
Start: 1314016
End: 1314567
Strand: Reverse
Name: 182681714
Synonym: XfasM23_1172
Alternate gene names: NA
Gene position: 1314567-1314016 (Counterclockwise)
Preceding gene: 182681715
Following gene: 182681713
Centisome position: 51.84
GC content: 57.97
Gene sequence:
>552_bases ATGACATTCCAGCACACCTGCCCAACATTCCCTGCCAAGATCAATGCTGGATGCTCATTACAGATATCCCTTGCACTCAA AGACTACCCCTGGCCCGACTGGACACTCCATTGCCTCCTGCGTGGTCCGGCATCACTGGACCTCACCGCGCAGGGTGAAA ACACCACCCACCGATTCAACATCCCCGCTGCGGACACCGCACAGTGGACACCCGGCGATTACCTCTACCAACTGCGTGCA GCACACAGCCCCCAGACCATCGAAATAAAACGTGGGAAACTCCGTGTTGAGCCAGACTTTGCAGCGCTGCCCCAAGGCTA TGACGGACGCAGCGACAACCAACGCGCCTTAGATGCCATCAACGCCGTCCTGCAAAAACGCGCCACCCAGGACCAACAGC GCTACCGCATCAACAACCGCGAACTGTGGCGTACCCCCATCGCTGAATTGCTGAAACTACGCACCTTCTACGCCGTAGCC GTACAACGCGAAACACCCACCGACACCCCCCGCAGCTGGGGGAACATCGTTCCTGTGAGGTTTGTAGGATGA
Upstream 100 bases:
>100_bases CCCCACCCCAGAAGTGCAACACCATACCCCCCATCTTCGCCCCCAACGTCCCCGGCCCCCCTTAAGACGCCGGAGAACAT GGGCTAACGACTGGTGACCC
Downstream 100 bases:
>100_bases ACCTCTGGACATGGTGGACACAGCGCACAGCCCAGCCAGATCACCCCACCCCAGACACGGCAACACCCCAGCCAAACCAC CCCCCGCGGCGCTGGTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTFQHTCPTFPAKINAGCSLQISLALKDYPWPDWTLHCLLRGPASLDLTAQGENTTHRFNIPAADTAQWTPGDYLYQLRA AHSPQTIEIKRGKLRVEPDFAALPQGYDGRSDNQRALDAINAVLQKRATQDQQRYRINNRELWRTPIAELLKLRTFYAVA VQRETPTDTPRSWGNIVPVRFVG
Sequences:
>Translated_183_residues MTFQHTCPTFPAKINAGCSLQISLALKDYPWPDWTLHCLLRGPASLDLTAQGENTTHRFNIPAADTAQWTPGDYLYQLRA AHSPQTIEIKRGKLRVEPDFAALPQGYDGRSDNQRALDAINAVLQKRATQDQQRYRINNRELWRTPIAELLKLRTFYAVA VQRETPTDTPRSWGNIVPVRFVG >Mature_182_residues TFQHTCPTFPAKINAGCSLQISLALKDYPWPDWTLHCLLRGPASLDLTAQGENTTHRFNIPAADTAQWTPGDYLYQLRAA HSPQTIEIKRGKLRVEPDFAALPQGYDGRSDNQRALDAINAVLQKRATQDQQRYRINNRELWRTPIAELLKLRTFYAVAV QRETPTDTPRSWGNIVPVRFVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20801; Mature: 20670
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQHTCPTFPAKINAGCSLQISLALKDYPWPDWTLHCLLRGPASLDLTAQGENTTHRFN CCCCCCCCCCCCEECCCCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE IPAADTAQWTPGDYLYQLRAAHSPQTIEIKRGKLRVEPDFAALPQGYDGRSDNQRALDAI CCCCCCCCCCCCHHHHEEHHCCCCCEEEEECCEEEECCCHHHCCCCCCCCCCCHHHHHHH NAVLQKRATQDQQRYRINNRELWRTPIAELLKLRTFYAVAVQRETPTDTPRSWGNIVPVR HHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEE FVG EEC >Mature Secondary Structure TFQHTCPTFPAKINAGCSLQISLALKDYPWPDWTLHCLLRGPASLDLTAQGENTTHRFN CCCCCCCCCCCEECCCCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE IPAADTAQWTPGDYLYQLRAAHSPQTIEIKRGKLRVEPDFAALPQGYDGRSDNQRALDAI CCCCCCCCCCCCHHHHEEHHCCCCCEEEEECCEEEECCCHHHCCCCCCCCCCCHHHHHHH NAVLQKRATQDQQRYRINNRELWRTPIAELLKLRTFYAVAVQRETPTDTPRSWGNIVPVR HHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEE FVG EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA