| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681699
Identifier: 182681699
GI number: 182681699
Start: 1302490
End: 1302999
Strand: Reverse
Name: 182681699
Synonym: XfasM23_1157
Alternate gene names: NA
Gene position: 1302999-1302490 (Counterclockwise)
Preceding gene: 182681700
Following gene: 182681698
Centisome position: 51.39
GC content: 52.16
Gene sequence:
>510_bases ATGTCCGCACCGCGTCATATCCTCAAACACCTCAACCTGTTTATTGATGGCAAAGGCTATGCAGGGCAGGTCGAAGACAT CAACCTGCCAAAATTGACCTTAAAAACCGAAGAGTTTCGGGGTGGCGGCATGCTGGCCCCTGTAGAACTCACGATGGGCA TGGAGAAGCTAGAAACCGATGTCAGCTTGATTTGCTACAGCAGCGACGCACTCCTGCTGTTCGGCGTTACCGAAGGAAAG CAGGTGAACTGCACCGTGCGTGGCTTTCTGGAATCCTTCGATGGGACGACAACATCCCTTGCGATCCATCTGCGCGGCAA AGTCAAAGAAATCGATCGCGGCACCTGGAAACCGCCGGACAAATCCAGCCTAAAACTGGCCTTGGCACTGAGCTACTACA AAGAAGTGCATAACGCCACCGTCATTCATGAAATCGACATAGAAAACATGATCTTCCAGCAAAACGGCATTGATCTGCTC GCCCCCGCTCGCAACGCACTAGGACTCTAA
Upstream 100 bases:
>100_bases GACACGTCTATTTTAATTTTGACTTCACCCCGGCCTATCCGGCCGAACACATCACCTTCCGTAGTCGGCTCACCAGTGAT TATCTTGTGGAGGTGTTCTA
Downstream 100 bases:
>100_bases CCATGACCGGACCGACCACTGATAAACCGTACATCCGCGAAGCAGAAGGCGGCGTACGCATCACCTTAGCCTCACCCGTC AGCATCAATGGCACCACCGT
Product: phage major tail tube protein
Products: NA
Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Contractile Tail Tube Protein; Tail Fiber Component Of Prophage; Phage Tail Tube Protein; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Phage-Related Tail Tube Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Phage Tail Tube-Like Protein; Pyocin R2_PP Tail Tube Protein
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETDVSLICYSSDALLLFGVTEGK QVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPDKSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLL APARNALGL
Sequences:
>Translated_169_residues MSAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETDVSLICYSSDALLLFGVTEGK QVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPDKSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLL APARNALGL >Mature_168_residues SAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETDVSLICYSSDALLLFGVTEGKQ VNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPDKSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLLA PARNALGL
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18629; Mature: 18498
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETD CCCHHHHHHHCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCHHHHCCC VSLICYSSDALLLFGVTEGKQVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPD EEEEEECCCEEEEEEECCCCEEEEEHEEHHHHCCCCEEEEEEEECCCEEECCCCCCCCCC KSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLLAPARNALGL CCCEEEEEHHHHHHHHHCCEEEEEECCCCEEEECCCCEEEECCHHHCCC >Mature Secondary Structure SAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETD CCHHHHHHHCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCHHHHCCC VSLICYSSDALLLFGVTEGKQVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPD EEEEEECCCEEEEEEECCCCEEEEEHEEHHHHCCCCEEEEEEEECCCEEECCCCCCCCCC KSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLLAPARNALGL CCCEEEEEHHHHHHHHHCCEEEEEECCCCEEEECCCCEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA