| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681641
Identifier: 182681641
GI number: 182681641
Start: 1244370
End: 1245017
Strand: Reverse
Name: 182681641
Synonym: XfasM23_1099
Alternate gene names: NA
Gene position: 1245017-1244370 (Counterclockwise)
Preceding gene: 182681654
Following gene: 182681640
Centisome position: 49.1
GC content: 52.47
Gene sequence:
>648_bases ATGCCTTCCTCACTATTCCCTTCCTTTCTTAAACCTTTAGCCGCCCACGCTCTGGAACTGGCATTAAATCGTCTCTTGAC GCTTGATCCGGATACCTCGCAAGCACTACGTACACTTGATGGCCAATGCATTGCACTGTCCCTCAAAACGCCTGCTGTAG AGTTACAGATTCGTGTTGATGGGGAATGTTTGCGCGTTGGTCCGGTCGATGCAGCGTATGAGATGGACCTAAAAGTACAT GGGACGTTGGCCGGGTTTCTTGGGCAATTACCGTGGCTGGAGCAGGTGCGTCGGGCTGGTGGGGCACAGACTGGGCGTCT GCGTGTGGCGGGTGATGCTGAACTGGCACAACGTTTGCAACAGTTAGCCAGACGTTTTGATCCTGATTGGCAACAACCAT TTATTGTTGTGTTTGGTGAATTGCTTGGCGTACAGATTGCTGGTGTGTTGCGTATGACTTTGCGGCAGCTGCAACGCAGC GCAGTGGACTTGGCACAGAGTGCGGCCGAGTTCATTACTGAAGAATCCAGCAGCGTGGTGCCGCGTGCTGAGTTGGAAGC GTTCTACGAGGATGTTGATGTGCTACGTGATGATGTCGAGCGCTTGGCTACTCGACTGATGAAATTGTGTTCGGAAATGG CAGCATGA
Upstream 100 bases:
>100_bases ATGGTAGCAATGTGTAGTTCATCTAAGCTGCGCTTATTAAATCGAACTGAAAGTAATATTGAGGTAATGATAATGATACG ACCCAGGATAGAATGGAGTA
Downstream 100 bases:
>100_bases AGGCGTTATTCCGGGCCTGCCGCATTGGCAAGGTCATGCTGCGCTACCGCCTGGATACGTTGCTGGACGGTACAGCCGTA GAGCGCTGGTTGCGTTTGGC
Product: sterol-binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPSSLFPSFLKPLAAHALELALNRLLTLDPDTSQALRTLDGQCIALSLKTPAVELQIRVDGECLRVGPVDAAYEMDLKVH GTLAGFLGQLPWLEQVRRAGGAQTGRLRVAGDAELAQRLQQLARRFDPDWQQPFIVVFGELLGVQIAGVLRMTLRQLQRS AVDLAQSAAEFITEESSSVVPRAELEAFYEDVDVLRDDVERLATRLMKLCSEMAA
Sequences:
>Translated_215_residues MPSSLFPSFLKPLAAHALELALNRLLTLDPDTSQALRTLDGQCIALSLKTPAVELQIRVDGECLRVGPVDAAYEMDLKVH GTLAGFLGQLPWLEQVRRAGGAQTGRLRVAGDAELAQRLQQLARRFDPDWQQPFIVVFGELLGVQIAGVLRMTLRQLQRS AVDLAQSAAEFITEESSSVVPRAELEAFYEDVDVLRDDVERLATRLMKLCSEMAA >Mature_214_residues PSSLFPSFLKPLAAHALELALNRLLTLDPDTSQALRTLDGQCIALSLKTPAVELQIRVDGECLRVGPVDAAYEMDLKVHG TLAGFLGQLPWLEQVRRAGGAQTGRLRVAGDAELAQRLQQLARRFDPDWQQPFIVVFGELLGVQIAGVLRMTLRQLQRSA VDLAQSAAEFITEESSSVVPRAELEAFYEDVDVLRDDVERLATRLMKLCSEMAA
Specific function: Unknown
COG id: COG3165
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23683; Mature: 23551
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSLFPSFLKPLAAHALELALNRLLTLDPDTSQALRTLDGQCIALSLKTPAVELQIRVD CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCEEEEEEEEC GECLRVGPVDAAYEMDLKVHGTLAGFLGQLPWLEQVRRAGGAQTGRLRVAGDAELAQRLQ CCEEEECCCCCHHEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHH QLARRFDPDWQQPFIVVFGELLGVQIAGVLRMTLRQLQRSAVDLAQSAAEFITEESSSVV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRAELEAFYEDVDVLRDDVERLATRLMKLCSEMAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSSLFPSFLKPLAAHALELALNRLLTLDPDTSQALRTLDGQCIALSLKTPAVELQIRVD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCEEEEEEEEC GECLRVGPVDAAYEMDLKVHGTLAGFLGQLPWLEQVRRAGGAQTGRLRVAGDAELAQRLQ CCEEEECCCCCHHEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHH QLARRFDPDWQQPFIVVFGELLGVQIAGVLRMTLRQLQRSAVDLAQSAAEFITEESSSVV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRAELEAFYEDVDVLRDDVERLATRLMKLCSEMAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA