| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681602
Identifier: 182681602
GI number: 182681602
Start: 1213240
End: 1214028
Strand: Reverse
Name: 182681602
Synonym: XfasM23_1060
Alternate gene names: NA
Gene position: 1214028-1213240 (Counterclockwise)
Preceding gene: 182681603
Following gene: 182681601
Centisome position: 47.88
GC content: 55.51
Gene sequence:
>789_bases ATGAACAACAACAGCAACGAACCAGGAGCTGGTATGAATGCAATGACACCTTTCCAGTTTGAATCTCATGCCGTGCGCAC CGTGGTCGATGATCACGGCGAAGTGTGGTTTGTCGGCACAGACGTTGCTACGGTATTAGGCTACGCCAATCCCCATAAAG CGTTGGATGCCCACTGCAAGGGGTGTGCGAAACGCACACCCCTTCAGACACCAGGCGGGATTCAAGAAATCCGGATCATC TCCGAGCCTGACATGCTCCGCTTGATTGTGAGCAGCAAACTCCCTGCCGCAGAGCGGTTCGAGCGTTGGGTGTTTGAGGA AGTTCTGCCCACCCTGCGCAAGACAGGCACCTACTCCACACCAGGAGCACTGCCCACCTTGCCTGGGCCGACACAGGATC GCGTTGCCGCACTCCTGTTAATCGGCCAATTCGTTTCCAAAGTGACTGGCGTAAAACCAGGAATTGCTGCCGCCGCGACA TTGGCCTGTATCAAAAGCAATACGAATTTAACGACCGAAGAGATACGCCGCGCATTGCCTGCGTTGCAGGAACCGCTTTG CCTGCTCAACGCCACGCAACTAGGCAAGCGGCTGCATTGCTCGGCCAAGGCGGTGAACCAATTATTAGCCTCCAGAGGCT TTCAGTTCCGTAATGAACGCGACGAATGGGAATTAACCGAAGCCGGTCGCGTGTGGTGTGAAGCCATTCCGTACTCGCGC AACGGGCACAGCAGTTATCAACTCTTGTGGAATCCAGACGTCATCGCGTGTCTGAGGGAGGCGGCATGA
Upstream 100 bases:
>100_bases ATGGCATGGATGGAGGTGTTCTCAGAATAGAAAAAGCCCTCGGCCCACACATGGAACAGGCCGCCCAAAAGGTCATGGGC AATGCAAGGAGACATATCCA
Downstream 100 bases:
>100_bases ATTATTACGAACGCCACATTGGCGATTACGCCCGTGACACGGGGTACCTCTCGGTGCTCGAACATGGCATTTACTGCCTG CTGTTAGATCGCTACTACGC
Product: prophage antirepressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTPGGIQEIRII SEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAAT LACIKSNTNLTTEEIRRALPALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR NGHSSYQLLWNPDVIACLREAA
Sequences:
>Translated_262_residues MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTPGGIQEIRII SEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAAT LACIKSNTNLTTEEIRRALPALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR NGHSSYQLLWNPDVIACLREAA >Mature_262_residues MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTPGGIQEIRII SEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAAT LACIKSNTNLTTEEIRRALPALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR NGHSSYQLLWNPDVIACLREAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 28686; Mature: 28686
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHH GCAKRTPLQTPGGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYST HHHHCCCCCCCCCHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC NGHSSYQLLWNPDVIACLREAA CCCCCEEEEECCHHHHHHHHCC >Mature Secondary Structure MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHH GCAKRTPLQTPGGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYST HHHHCCCCCCCCCHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC NGHSSYQLLWNPDVIACLREAA CCCCCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]