| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681570
Identifier: 182681570
GI number: 182681570
Start: 1180973
End: 1182469
Strand: Reverse
Name: 182681570
Synonym: XfasM23_1028
Alternate gene names: NA
Gene position: 1182469-1180973 (Counterclockwise)
Preceding gene: 182681571
Following gene: 182681569
Centisome position: 46.63
GC content: 57.25
Gene sequence:
>1497_bases ATGGCGCTAGCGCTTTCAAACATTGTCAATGTGCAACTCAATGCACAGCCCCAGTCAGCAACCCGTCGTGACTTTGGGAT GCTGGCCGTGTTCACCCCCGAAGCGGGCACCGTATTTGTCGATACCAAAACACGCTTCATGCATGCCAGCACGCAGCAGC AGGTGGAACACGCCTTTGGCAGCTACTCCAAAACCGCAGCAGCCACCCGCCGCTTCTTTGCACAAAGCCCCCGCCCCAAA CAGCTCATGGTGGCGCGCTGGAATCGATTTAAACAACACATTGCCGCCTCCACAACGACACTCAATTCCGGGCCGATTGC TCAGGCCGATACGTGGTACAAGGGCGTTGATGACGGCTGTTTTTCCATCCGCTTATATGGTGTGGATGTCACCTTATCCA AGCTGAATTTCACCACGGCCACTTCCTTCTCCCAGGTGGCGGCTGTGTTGAATAAGGCACTGGATGAGTTTGGATTTCAT TGCCGATTCTTAAATGATTGCTTTGAAATCTATGCTGCCGTGGCCGGAGGAAATAACGCCATTGGCTATGCACAGCAGCG AAGTCCCTCTGGCACCTATGTCGGGCACTGGCTGAAGCTTGAAGCCGATCAGGCCCGCCTGAACATCGGCAACAACGCTG ACACCATCGAGGCCGAAACACTGCCGGACGCCTTTGCGGCCTTGCAGGCACTCACCACAGGCTGGTATGCCGCCGCGGTG GCCGATGAGACATTGACAGACACGCACATCCGATCCGCCTCCACATGGATCCAAGCGGCAGACAAAAAAATCATGGGATG GACGACCCGCGACCCGGCGCATTTGGAATTTAAAAAAACCAATGTGTTCAGACAGCTCAACGCATCAGGGTGTGATCGCA CCGTGGTGCTGTACGACACCACGGACCCCTACGCGGTGATCTCGTGGTTGGCCCGTGCCTTGTCGGTGAACTTCAGTGCC AACAACGCCGCCCTGACCATGAAATTTAAGCAACTGCCCGGCGTGGCCGCAGATCAATTGACACAGACCCAGGTGGCCCA GTGCGTGCGTTTAGGCATCAACTATTACGCCTACTTTGATGATGTGGCGATGGTGGCCGAAGGCACCTGTCTTGGCGGGC GCTTCTTTGATGAAGTCCATCTGCTGGATTGGCTGGTGGATGCGGTGCAAAAGGAAGTGTTTGCCGTCCTGCATCGCAGC CCGACGAAGGTGCCGCTGACGGATGCAGGCACCCACCTGCTGCTGGCGGCCTGCAAAAAAGTCTGCCAAGAAGGGGTCCG TAACGGCGCCTTTGCCCCTGGCCTCTGGAACGGGCAGGCCCTCGGTGCGCTGGCCACCGGCGATTACCTGGACGCTGGTT TTTATGTCTGGGCCGATTCAGTGGACACCTTATCGACCTCTGATCGCCAAGCACGCCGGGCACCGCCCATCCAGATCGCC GTGAAGCTGGCCGGTGCCATCCATGCGGTGGACGTCATCATCCACTTTGACCGATAA
Upstream 100 bases:
>100_bases GGTGACCACCCTGGCTGCTGTGGACAGCGCAGACATCCATATTCACACCCGCACCGGTCACATCGCCAGCGTGACCATGA CGGCACCGGAGACCCAGTAA
Downstream 100 bases:
>100_bases AGGAATCCCATGTCCGTCTTCGACCCCAAACAAGTGTCGGTGCTGCTCAATGGAACCCAGATCAAAGACTGGGCCGATGG CACGGACGTCATCGACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Phage Protein
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MALALSNIVNVQLNAQPQSATRRDFGMLAVFTPEAGTVFVDTKTRFMHASTQQQVEHAFGSYSKTAAATRRFFAQSPRPK QLMVARWNRFKQHIAASTTTLNSGPIAQADTWYKGVDDGCFSIRLYGVDVTLSKLNFTTATSFSQVAAVLNKALDEFGFH CRFLNDCFEIYAAVAGGNNAIGYAQQRSPSGTYVGHWLKLEADQARLNIGNNADTIEAETLPDAFAALQALTTGWYAAAV ADETLTDTHIRSASTWIQAADKKIMGWTTRDPAHLEFKKTNVFRQLNASGCDRTVVLYDTTDPYAVISWLARALSVNFSA NNAALTMKFKQLPGVAADQLTQTQVAQCVRLGINYYAYFDDVAMVAEGTCLGGRFFDEVHLLDWLVDAVQKEVFAVLHRS PTKVPLTDAGTHLLLAACKKVCQEGVRNGAFAPGLWNGQALGALATGDYLDAGFYVWADSVDTLSTSDRQARRAPPIQIA VKLAGAIHAVDVIIHFDR
Sequences:
>Translated_498_residues MALALSNIVNVQLNAQPQSATRRDFGMLAVFTPEAGTVFVDTKTRFMHASTQQQVEHAFGSYSKTAAATRRFFAQSPRPK QLMVARWNRFKQHIAASTTTLNSGPIAQADTWYKGVDDGCFSIRLYGVDVTLSKLNFTTATSFSQVAAVLNKALDEFGFH CRFLNDCFEIYAAVAGGNNAIGYAQQRSPSGTYVGHWLKLEADQARLNIGNNADTIEAETLPDAFAALQALTTGWYAAAV ADETLTDTHIRSASTWIQAADKKIMGWTTRDPAHLEFKKTNVFRQLNASGCDRTVVLYDTTDPYAVISWLARALSVNFSA NNAALTMKFKQLPGVAADQLTQTQVAQCVRLGINYYAYFDDVAMVAEGTCLGGRFFDEVHLLDWLVDAVQKEVFAVLHRS PTKVPLTDAGTHLLLAACKKVCQEGVRNGAFAPGLWNGQALGALATGDYLDAGFYVWADSVDTLSTSDRQARRAPPIQIA VKLAGAIHAVDVIIHFDR >Mature_497_residues ALALSNIVNVQLNAQPQSATRRDFGMLAVFTPEAGTVFVDTKTRFMHASTQQQVEHAFGSYSKTAAATRRFFAQSPRPKQ LMVARWNRFKQHIAASTTTLNSGPIAQADTWYKGVDDGCFSIRLYGVDVTLSKLNFTTATSFSQVAAVLNKALDEFGFHC RFLNDCFEIYAAVAGGNNAIGYAQQRSPSGTYVGHWLKLEADQARLNIGNNADTIEAETLPDAFAALQALTTGWYAAAVA DETLTDTHIRSASTWIQAADKKIMGWTTRDPAHLEFKKTNVFRQLNASGCDRTVVLYDTTDPYAVISWLARALSVNFSAN NAALTMKFKQLPGVAADQLTQTQVAQCVRLGINYYAYFDDVAMVAEGTCLGGRFFDEVHLLDWLVDAVQKEVFAVLHRSP TKVPLTDAGTHLLLAACKKVCQEGVRNGAFAPGLWNGQALGALATGDYLDAGFYVWADSVDTLSTSDRQARRAPPIQIAV KLAGAIHAVDVIIHFDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54404; Mature: 54273
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALALSNIVNVQLNAQPQSATRRDFGMLAVFTPEAGTVFVDTKTRFMHASTQQQVEHAFG CCEEECCEEEEEEECCCCCCHHCCCCEEEEEECCCCEEEEECCHHEEECCHHHHHHHHHC SYSKTAAATRRFFAQSPRPKQLMVARWNRFKQHIAASTTTLNSGPIAQADTWYKGVDDGC CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCHHCCCCCCE FSIRLYGVDVTLSKLNFTTATSFSQVAAVLNKALDEFGFHCRFLNDCFEIYAAVAGGNNA EEEEEEEEEEEEEEECEEHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC IGYAQQRSPSGTYVGHWLKLEADQARLNIGNNADTIEAETLPDAFAALQALTTGWYAAAV CCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCEEEHHCCHHHHHHHHHHHCCHHHHHH ADETLTDTHIRSASTWIQAADKKIMGWTTRDPAHLEFKKTNVFRQLNASGCDRTVVLYDT CCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEHHHHHHHCCCCCCCCEEEEEEC TDPYAVISWLARALSVNFSANNAALTMKFKQLPGVAADQLTQTQVAQCVRLGINYYAYFD CCHHHHHHHHHHHHEECCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCHHEEEEC DVAMVAEGTCLGGRFFDEVHLLDWLVDAVQKEVFAVLHRSPTKVPLTDAGTHLLLAACKK CHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VCQEGVRNGAFAPGLWNGQALGALATGDYLDAGFYVWADSVDTLSTSDRQARRAPPIQIA HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEE VKLAGAIHAVDVIIHFDR EEHHHHHEEEEEEEEECC >Mature Secondary Structure ALALSNIVNVQLNAQPQSATRRDFGMLAVFTPEAGTVFVDTKTRFMHASTQQQVEHAFG CEEECCEEEEEEECCCCCCHHCCCCEEEEEECCCCEEEEECCHHEEECCHHHHHHHHHC SYSKTAAATRRFFAQSPRPKQLMVARWNRFKQHIAASTTTLNSGPIAQADTWYKGVDDGC CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCHHCCCCCCE FSIRLYGVDVTLSKLNFTTATSFSQVAAVLNKALDEFGFHCRFLNDCFEIYAAVAGGNNA EEEEEEEEEEEEEEECEEHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC IGYAQQRSPSGTYVGHWLKLEADQARLNIGNNADTIEAETLPDAFAALQALTTGWYAAAV CCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCEEEHHCCHHHHHHHHHHHCCHHHHHH ADETLTDTHIRSASTWIQAADKKIMGWTTRDPAHLEFKKTNVFRQLNASGCDRTVVLYDT CCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEHHHHHHHCCCCCCCCEEEEEEC TDPYAVISWLARALSVNFSANNAALTMKFKQLPGVAADQLTQTQVAQCVRLGINYYAYFD CCHHHHHHHHHHHHEECCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCHHEEEEC DVAMVAEGTCLGGRFFDEVHLLDWLVDAVQKEVFAVLHRSPTKVPLTDAGTHLLLAACKK CHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VCQEGVRNGAFAPGLWNGQALGALATGDYLDAGFYVWADSVDTLSTSDRQARRAPPIQIA HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEE VKLAGAIHAVDVIIHFDR EEHHHHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA