| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681567
Identifier: 182681567
GI number: 182681567
Start: 1178070
End: 1179959
Strand: Reverse
Name: 182681567
Synonym: XfasM23_1025
Alternate gene names: NA
Gene position: 1179959-1178070 (Counterclockwise)
Preceding gene: 182681568
Following gene: 182681564
Centisome position: 46.53
GC content: 62.49
Gene sequence:
>1890_bases ATGATTCTCGACGAATTCCTGATCCGCCTTGGCGCGGTCGCTGACACCTCAGGCTTCAACACCTTTAGCACCGGCCTGAC CCGCGTTACGGGCCTCGTGACGGTGGCCGCCGCCGCCATGGGCGGGGCGCTGGCGGGAATGAATCGCTTTGTCGGCAGCG CCTTAAGCGAACTCAATGCCCTCAACAGTGCCAGCCAGCGCACCGGAGCCAGCCTGTCCTTGCTCCAGGAGCTGGGCTAT GCGGCGCGTTTGAATGGCTCCTCTGTGGAGGCCTCGACCCGTTCTATTGAATCCTTGTCCCAAAAAATAGGCGAAGCCGC CAATGGAGTGGGGCGCGGGGCCATGCTGTTCCAAAAGCTGGGCTTGCAGGCCCGACAGGCCGATGGCTCCGTTAAATCCG TTGGCGACATGCTGGGCGATGTGCAAGAAAAAATCCGTGGCTTGTCGGCACCACAACAGCAGTCCATCCTAGCCAACCTG GGCATGGATGCCACGATGCTGCAAACCCTGCGCCTGAGTCGTGAAGAGTTAAACAGCGTCTTCCAAGAGGCACACGATCT AGGCGTCATCACCGCGGATGGTGCCGATACCGCGCTGGAGTATGGCGATGCGATGGAACGCCTGCGCGTGGTGCTGGGGG CGTTACGGACCAACATCGCCATTGGGGTGGCACCGGCCTTCACCCGGCTGATTGAGCACTCCAAACACTGGTTGATTGCC AATAAAGAGCAACTGCGTGATGGCATCGGCAAAGTCGTCAAGATCCTCATTGCAGCGGGCACCGCCGTATGGAACGTCAT CCGTGCCGTGAACAGCGCGGTGAACCAAACCATTGGTTGGAAAGCGGCGCTGCTGGCCGTGGGCGCGGTGCTGGCCCGGG CCTTTGCACTGAACCCACTCACCTGGCTGATTGCGGGGATCGTGGCCCTCGTGGCCTTGGTCGATGACTTCATAACCTAC CTGGACGGCGGAGAGTCCTTGCTCGGTGCCTTCTGGGGTCCACTGATTGCCTACGCCAAGCGCGCCAAGGCCGTGATTGA ACACCTTACGCCCGCACTCAACGCCCTTGGCGTCCTCTTAGCGGGACTGGCCATCGGTCACGTGGTGAGTCATATTGGCC GCCTTTTGGGTGCAGGCCGCACCCTGGCGCTGTGGCTGGCGGGGCCGTTGGTGAAAGCGCTCCAGGTTGCCGCGCTGGCG TTGCGGGTCGCGTTTTTGTCCAACCCCATTGGAGTAGTGATTGCAAGCGTGGCCCTGTTGGCCTATGCGATCTATACCCA CTTTGACAAGATCAAGCAGGCGGTGGGCACCGCTTGGGACTGGTGCACCCGCACCACCCATGCCGCGGTTGGGTCCATCC AACACACGCTGCAAGAGGCTGCCGCCGCCGCCAAGACCACCTGGGCCAGCGTCAAGGACGCCTGTGCGCTGGCCTTTAGC CACAGCATCGCCAGCGCCGATAGTGCCGTAAACCGCTTGCGGGCCGTGTTCAGCGCCATGGGCAGCCGTATCAGCGCCGC CCTGACCAGCGCCTTCGACACCCTCATGACGCTGTGGGACCGTACCGTCGGGCGTATCGCCCAGGGGGCCGAGCGGATCA AAGGCTTTTTCCGAGCGATTGCTCCAACACTGAAGCAGGCCGGTCGTGACACCCAAGACGTGGCACAGCGCGTCAATGCA CAGGTGCAGGCCGCCCAGACGACAGCGCGTCACGCCGCTGCTCAGGCCGCCACGCCCGCCCGTTCTCAGCCCAACGTGCA TTCCCAACAGGAAGTAAAGATCGATATCCACACCGCCGACCCGATCCTGGCCGGTCGCCAAGCCGCCGCCGACATCAACA GACACCACCAGATGGCGCTGCGCAATACCGGTAGTGCTGTGGCGTTTTGA
Upstream 100 bases:
>100_bases GACCAACTGCGCACCGTGTACTGCCTCAGTGACTTATGTAGCTTCCACACCGCGATGGTGGAATGGGATGCCCTCCAGCA TGACGCACTAACCCCCTGCG
Downstream 100 bases:
>100_bases TCCGTCCAGCCTATCGGTAAATCTCACCCCGGTGACCAACACGTTCTGTTTTTGATTTTTATGCCGCTTCTAATTTCACA TGAACGCGCCGTCCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Tape Measure Core Region
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNALNSASQRTGASLSLLQELGY AARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKLGLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANL GMDATMLQTLRLSREELNSVFQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAALLAVGAVLARAFALNPLTWLIAGIVALVALVDDFITY LDGGESLLGAFWGPLIAYAKRAKAVIEHLTPALNALGVLLAGLAIGHVVSHIGRLLGAGRTLALWLAGPLVKALQVAALA LRVAFLSNPIGVVIASVALLAYAIYTHFDKIKQAVGTAWDWCTRTTHAAVGSIQHTLQEAAAAAKTTWASVKDACALAFS HSIASADSAVNRLRAVFSAMGSRISAALTSAFDTLMTLWDRTVGRIAQGAERIKGFFRAIAPTLKQAGRDTQDVAQRVNA QVQAAQTTARHAAAQAATPARSQPNVHSQQEVKIDIHTADPILAGRQAAADINRHHQMALRNTGSAVAF
Sequences:
>Translated_629_residues MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNALNSASQRTGASLSLLQELGY AARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKLGLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANL GMDATMLQTLRLSREELNSVFQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAALLAVGAVLARAFALNPLTWLIAGIVALVALVDDFITY LDGGESLLGAFWGPLIAYAKRAKAVIEHLTPALNALGVLLAGLAIGHVVSHIGRLLGAGRTLALWLAGPLVKALQVAALA LRVAFLSNPIGVVIASVALLAYAIYTHFDKIKQAVGTAWDWCTRTTHAAVGSIQHTLQEAAAAAKTTWASVKDACALAFS HSIASADSAVNRLRAVFSAMGSRISAALTSAFDTLMTLWDRTVGRIAQGAERIKGFFRAIAPTLKQAGRDTQDVAQRVNA QVQAAQTTARHAAAQAATPARSQPNVHSQQEVKIDIHTADPILAGRQAAADINRHHQMALRNTGSAVAF >Mature_629_residues MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNALNSASQRTGASLSLLQELGY AARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKLGLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANL GMDATMLQTLRLSREELNSVFQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAALLAVGAVLARAFALNPLTWLIAGIVALVALVDDFITY LDGGESLLGAFWGPLIAYAKRAKAVIEHLTPALNALGVLLAGLAIGHVVSHIGRLLGAGRTLALWLAGPLVKALQVAALA LRVAFLSNPIGVVIASVALLAYAIYTHFDKIKQAVGTAWDWCTRTTHAAVGSIQHTLQEAAAAAKTTWASVKDACALAFS HSIASADSAVNRLRAVFSAMGSRISAALTSAFDTLMTLWDRTVGRIAQGAERIKGFFRAIAPTLKQAGRDTQDVAQRVNA QVQAAQTTARHAAAQAATPARSQPNVHSQQEVKIDIHTADPILAGRQAAADINRHHQMALRNTGSAVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65982; Mature: 65982
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNA CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNSASQRTGASLSLLQELGYAARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKL HHHHHHHCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANLGMDATMLQTLRLSREELNSV CCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAALLAVGAVLARAFALNPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TWLIAGIVALVALVDDFITYLDGGESLLGAFWGPLIAYAKRAKAVIEHLTPALNALGVLL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAIGHVVSHIGRLLGAGRTLALWLAGPLVKALQVAALALRVAFLSNPIGVVIASVALL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AYAIYTHFDKIKQAVGTAWDWCTRTTHAAVGSIQHTLQEAAAAAKTTWASVKDACALAFS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSIASADSAVNRLRAVFSAMGSRISAALTSAFDTLMTLWDRTVGRIAQGAERIKGFFRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APTLKQAGRDTQDVAQRVNAQVQAAQTTARHAAAQAATPARSQPNVHSQQEVKIDIHTAD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECC PILAGRQAAADINRHHQMALRNTGSAVAF CHHHCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNA CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNSASQRTGASLSLLQELGYAARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKL HHHHHHHCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANLGMDATMLQTLRLSREELNSV CCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAALLAVGAVLARAFALNPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TWLIAGIVALVALVDDFITYLDGGESLLGAFWGPLIAYAKRAKAVIEHLTPALNALGVLL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAIGHVVSHIGRLLGAGRTLALWLAGPLVKALQVAALALRVAFLSNPIGVVIASVALL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AYAIYTHFDKIKQAVGTAWDWCTRTTHAAVGSIQHTLQEAAAAAKTTWASVKDACALAFS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSIASADSAVNRLRAVFSAMGSRISAALTSAFDTLMTLWDRTVGRIAQGAERIKGFFRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APTLKQAGRDTQDVAQRVNAQVQAAQTTARHAAAQAATPARSQPNVHSQQEVKIDIHTAD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECC PILAGRQAAADINRHHQMALRNTGSAVAF CHHHCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA