| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is xpsN [H]
Identifier: 182681331
GI number: 182681331
Start: 916938
End: 917705
Strand: Direct
Name: xpsN [H]
Synonym: XfasM23_0778
Alternate gene names: 182681331
Gene position: 916938-917705 (Clockwise)
Preceding gene: 182681330
Following gene: 182681332
Centisome position: 36.16
GC content: 51.3
Gene sequence:
>768_bases ATGCGAATTGATGCCTTTTCGGTATGGACCTGGTTGTTTGCCACGGTTGCAGGCTGGGCTGCTTTGGTTTGTATGTTGGC GTTGGCAGGCATGGGAAGAAGCGTTCAACTGCTTCGTGATGATTCGCAATTAATCCGGCAGAAGTTGCCATCATTGCCTG CTTCAGCAGCCGAGCATTTTGGCCCATTTACCCGTTATGGTGAGATTGCTGCGCGTCCAGTGTTTTCCGAGGATCGCAAA CCACATCCGTTCCTGTTGGTGTCAGGCGAAAATACGAGTGTTGAAAGCGATGTACGTTTGACCGGGGTGCTGATCACACC TAAATTTAAAATGGCAACCTTGACCAACGAGCAAAACCAGTCGCTACGGATCCGTTTGGGTGGAGATGCAGTCAATGGGT GGCGCCTGATTAGTTTACAGCCACGCAGCGCTACGATTGAAGGTGCTGGTGGTACTCGCACTCTGGAATTACAGCCCTTT AATGGTCAGGCCAATAAAAATGCGAACAATCCTTCTGAAAATAACGTGCCAACGATGGTTGAGCATCCTGTTGCCTCACC CTCATCGGAGGCTGCCTCGGCTGCTTTAGTAAAGCCTAGTACATCTGCTGTTTCGCAAAGTGGCAGGGTTCCTGGGGGAC AGCAACCGGCTGCGGTGACAGGACCGCAAGCTCCTGAAAAGCCCATTGATGCACAGATACGTGCTATCCGTGAGCGCATT GAAGCCCGTCGGCGTCAACTTCAGCAACAACAAGAGCAACAAAAGTAA
Upstream 100 bases:
>100_bases AATGAGAGTGGTCATGGTCTTGATGTGGCTTTTGAATTGGCTGGCTTTTTAAGCCCCGGGGGTGATCATGTGCCCTCTTC CTTGCCGCAAAGGAGTAGCA
Downstream 100 bases:
>100_bases CAGGATAGAGGTTCTTTCTGACCAGCACCAATAAGAGTGAATGCATGATTTCGCGTCTTTTAACTGTTTCGATAGTCACT GCCCTTTTGGGTTCTTGTGT
Product: general secretion pathway protein N
Products: NA
Alternate protein names: Protein xpsN [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MRIDAFSVWTWLFATVAGWAALVCMLALAGMGRSVQLLRDDSQLIRQKLPSLPASAAEHFGPFTRYGEIAARPVFSEDRK PHPFLLVSGENTSVESDVRLTGVLITPKFKMATLTNEQNQSLRIRLGGDAVNGWRLISLQPRSATIEGAGGTRTLELQPF NGQANKNANNPSENNVPTMVEHPVASPSSEAASAALVKPSTSAVSQSGRVPGGQQPAAVTGPQAPEKPIDAQIRAIRERI EARRRQLQQQQEQQK
Sequences:
>Translated_255_residues MRIDAFSVWTWLFATVAGWAALVCMLALAGMGRSVQLLRDDSQLIRQKLPSLPASAAEHFGPFTRYGEIAARPVFSEDRK PHPFLLVSGENTSVESDVRLTGVLITPKFKMATLTNEQNQSLRIRLGGDAVNGWRLISLQPRSATIEGAGGTRTLELQPF NGQANKNANNPSENNVPTMVEHPVASPSSEAASAALVKPSTSAVSQSGRVPGGQQPAAVTGPQAPEKPIDAQIRAIRERI EARRRQLQQQQEQQK >Mature_255_residues MRIDAFSVWTWLFATVAGWAALVCMLALAGMGRSVQLLRDDSQLIRQKLPSLPASAAEHFGPFTRYGEIAARPVFSEDRK PHPFLLVSGENTSVESDVRLTGVLITPKFKMATLTNEQNQSLRIRLGGDAVNGWRLISLQPRSATIEGAGGTRTLELQPF NGQANKNANNPSENNVPTMVEHPVASPSSEAASAALVKPSTSAVSQSGRVPGGQQPAAVTGPQAPEKPIDAQIRAIRERI EARRRQLQQQQEQQK
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27652; Mature: 27652
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDAFSVWTWLFATVAGWAALVCMLALAGMGRSVQLLRDDSQLIRQKLPSLPASAAEHF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHC GPFTRYGEIAARPVFSEDRKPHPFLLVSGENTSVESDVRLTGVLITPKFKMATLTNEQNQ CCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEECCCCCC SLRIRLGGDAVNGWRLISLQPRSATIEGAGGTRTLELQPFNGQANKNANNPSENNVPTMV EEEEEECCCCCCCEEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE EHPVASPSSEAASAALVKPSTSAVSQSGRVPGGQQPAAVTGPQAPEKPIDAQIRAIRERI ECCCCCCCCHHHHEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH EARRRQLQQQQEQQK HHHHHHHHHHHHHCC >Mature Secondary Structure MRIDAFSVWTWLFATVAGWAALVCMLALAGMGRSVQLLRDDSQLIRQKLPSLPASAAEHF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHC GPFTRYGEIAARPVFSEDRKPHPFLLVSGENTSVESDVRLTGVLITPKFKMATLTNEQNQ CCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEECCCCCC SLRIRLGGDAVNGWRLISLQPRSATIEGAGGTRTLELQPFNGQANKNANNPSENNVPTMV EEEEEECCCCCCCEEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE EHPVASPSSEAASAALVKPSTSAVSQSGRVPGGQQPAAVTGPQAPEKPIDAQIRAIRERI ECCCCCCCCHHHHEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH EARRRQLQQQQEQQK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10692359; 12024217; 1313415 [H]