Click here to switch to the map view.

The map label for this gene is pefL [H]

Identifier: 182681329

GI number: 182681329

Start: 915199

End: 916335

Strand: Direct

Name: pefL [H]

Synonym: XfasM23_0776

Alternate gene names: 182681329

Gene position: 915199-916335 (Clockwise)

Preceding gene: 182681328

Following gene: 182681330

Centisome position: 36.09

GC content: 55.15

Gene sequence:

>1137_bases
ATGGCAATGAGTAAATGGTGGGAGAGTTTGAGGTGGTTCGGTGTGAGTATTGCCCCCGGTGTGGGTGGATTCTGGCACTG
GTGGTGGCAGTCGCTGTTGGCTTGGTTACCTATGCGCTGCCGTGTGCAAATGGGGCTGCTCTCAGAGCGTCTCTTGCTCT
CTGTACAGGCTGATGGTTTGCATTTGGTGCGTCAGTGCGGTGATGTTTTAGAACCGCTGGTACAGCTGCCGTGGCCTATC
ACACCTCAGGAACTGAGTGGGATGTTGTTGCCGAAGTTGCAGATATTACCGCGGCACTGGCTGCTACCTGCCACGAGTGC
GTTATGTCGGCCGTTGCGTTTGCCTGCTGGGGCGTCACAGCGTCTGCATGATGTCGTGCGCTTTGAAATTGATCGTCAAA
CGCCTTTCCAGGTCGAACAGGTTTATTACGATGTGCGTCTATTAAAAAGACATGGTGATGATGCTCAATTGGAAACGGAG
TTGGTCGTGGTGCCGCGGCGTTTGGTTGACGGTCCCGACGGTGTTCCTAAGGAATGGGCCACCACTCTGGCGGGCATTGA
TGTGGCTGATATGCAGGGCCAACCGTTGAATGTGAATCTGTTGCCGCCCGTGCAGCGGTGGCGGTGCAGTGATCCGATGC
GACGTTGGAATCTGGCTCTAGCTGCGGTCGCGCTTTTGTTGGTGGCCACTGCCGGAGCGCTGTTGTTGAATAATCGCATC
CGTGTGGCTGAGCAGCTGCGCCTGCAAGTGCAGGCGCAGGCCAGCAGTGCACGCCGCGTTGCGGCTGAACGTCAACGCTT
GGTCACGCTGATTGAAGGCGTTCGTTTCCTTGATGAGCGCCGCACTCTGCGCCCGAAAGTCATCGAAGTTTGGGAGGAGC
TGAGCCGACGCTTGCCGAACGGCACCTATTTGGAAAAATTTGCGATTGAGGATGGACAATTGCATTTGATGGGCATGAGT
AATGATGCATCCTCGTTGGTGCGTCTTCTGGAAGGTTCCAAGTTATGGCGTACGCCGTCATTAAGCAGCGTGCTACAGAG
TAATGTGGGAAGCAGTGTGAACCGTTTCGTCATCACTGCCGAATTGGTTGGAGTGGTTCCGATGAAGGAGGCTGCTGATG
GCAAGGCACAACGTTAA

Upstream 100 bases:

>100_bases
CTCAGGGGCGCGAAGCCGTGTTGCGCGCGGTCGTCCGCATGGGAGGGGGGCGTATCCCAGGAGCGACTTACACCATTTTG
CATTGGGAAGAGGGTATCGC

Downstream 100 bases:

>100_bases
CTCTGATCGTTGGTTGGCACTTGGTTTGTTGTTTATAAAGTTGTCTGTGCTCTACCTGTTGCTGGTTCATCCTTGGTTTA
CTCGGCCGATGTTGAGCGTA

Product: fimbrial assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MAMSKWWESLRWFGVSIAPGVGGFWHWWWQSLLAWLPMRCRVQMGLLSERLLLSVQADGLHLVRQCGDVLEPLVQLPWPI
TPQELSGMLLPKLQILPRHWLLPATSALCRPLRLPAGASQRLHDVVRFEIDRQTPFQVEQVYYDVRLLKRHGDDAQLETE
LVVVPRRLVDGPDGVPKEWATTLAGIDVADMQGQPLNVNLLPPVQRWRCSDPMRRWNLALAAVALLLVATAGALLLNNRI
RVAEQLRLQVQAQASSARRVAAERQRLVTLIEGVRFLDERRTLRPKVIEVWEELSRRLPNGTYLEKFAIEDGQLHLMGMS
NDASSLVRLLEGSKLWRTPSLSSVLQSNVGSSVNRFVITAELVGVVPMKEAADGKAQR

Sequences:

>Translated_378_residues
MAMSKWWESLRWFGVSIAPGVGGFWHWWWQSLLAWLPMRCRVQMGLLSERLLLSVQADGLHLVRQCGDVLEPLVQLPWPI
TPQELSGMLLPKLQILPRHWLLPATSALCRPLRLPAGASQRLHDVVRFEIDRQTPFQVEQVYYDVRLLKRHGDDAQLETE
LVVVPRRLVDGPDGVPKEWATTLAGIDVADMQGQPLNVNLLPPVQRWRCSDPMRRWNLALAAVALLLVATAGALLLNNRI
RVAEQLRLQVQAQASSARRVAAERQRLVTLIEGVRFLDERRTLRPKVIEVWEELSRRLPNGTYLEKFAIEDGQLHLMGMS
NDASSLVRLLEGSKLWRTPSLSSVLQSNVGSSVNRFVITAELVGVVPMKEAADGKAQR
>Mature_377_residues
AMSKWWESLRWFGVSIAPGVGGFWHWWWQSLLAWLPMRCRVQMGLLSERLLLSVQADGLHLVRQCGDVLEPLVQLPWPIT
PQELSGMLLPKLQILPRHWLLPATSALCRPLRLPAGASQRLHDVVRFEIDRQTPFQVEQVYYDVRLLKRHGDDAQLETEL
VVVPRRLVDGPDGVPKEWATTLAGIDVADMQGQPLNVNLLPPVQRWRCSDPMRRWNLALAAVALLLVATAGALLLNNRIR
VAEQLRLQVQAQASSARRVAAERQRLVTLIEGVRFLDERRTLRPKVIEVWEELSRRLPNGTYLEKFAIEDGQLHLMGMSN
DASSLVRLLEGSKLWRTPSLSSVLQSNVGSSVNRFVITAELVGVVPMKEAADGKAQR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP L family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007813 [H]

Pfam domain/function: PF05137 PilN [H]

EC number: NA

Molecular weight: Translated: 42736; Mature: 42605

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSKWWESLRWFGVSIAPGVGGFWHWWWQSLLAWLPMRCRVQMGLLSERLLLSVQADGL
CCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCHH
HLVRQCGDVLEPLVQLPWPITPQELSGMLLPKLQILPRHWLLPATSALCRPLRLPAGASQ
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHCCCHHCCCCHHHHHHHHCCCCCCHH
RLHDVVRFEIDRQTPFQVEQVYYDVRLLKRHGDDAQLETELVVVPRRLVDGPDGVPKEWA
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHEEEECHHHCCCCCCCCHHHH
TTLAGIDVADMQGQPLNVNLLPPVQRWRCSDPMRRWNLALAAVALLLVATAGALLLNNRI
HHHHCCCEECCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RVAEQLRLQVQAQASSARRVAAERQRLVTLIEGVRFLDERRTLRPKVIEVWEELSRRLPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GTYLEKFAIEDGQLHLMGMSNDASSLVRLLEGSKLWRTPSLSSVLQSNVGSSVNRFVITA
CCEEHHEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHEEEEE
ELVGVVPMKEAADGKAQR
HHHCCCCCHHCCCCCCCC
>Mature Secondary Structure 
AMSKWWESLRWFGVSIAPGVGGFWHWWWQSLLAWLPMRCRVQMGLLSERLLLSVQADGL
CHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCHH
HLVRQCGDVLEPLVQLPWPITPQELSGMLLPKLQILPRHWLLPATSALCRPLRLPAGASQ
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHCCCHHCCCCHHHHHHHHCCCCCCHH
RLHDVVRFEIDRQTPFQVEQVYYDVRLLKRHGDDAQLETELVVVPRRLVDGPDGVPKEWA
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHEEEECHHHCCCCCCCCHHHH
TTLAGIDVADMQGQPLNVNLLPPVQRWRCSDPMRRWNLALAAVALLLVATAGALLLNNRI
HHHHCCCEECCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RVAEQLRLQVQAQASSARRVAAERQRLVTLIEGVRFLDERRTLRPKVIEVWEELSRRLPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GTYLEKFAIEDGQLHLMGMSNDASSLVRLLEGSKLWRTPSLSSVLQSNVGSSVNRFVITA
CCEEHHEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHEEEEE
ELVGVVPMKEAADGKAQR
HHHCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]