Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is xpsI [H]

Identifier: 182681326

GI number: 182681326

Start: 913342

End: 913740

Strand: Direct

Name: xpsI [H]

Synonym: XfasM23_0773

Alternate gene names: 182681326

Gene position: 913342-913740 (Clockwise)

Preceding gene: 182681325

Following gene: 182681327

Centisome position: 36.02

GC content: 56.39

Gene sequence:

>399_bases
ATGAAGTGTCAGCGTGGTTACAGTTTGCTGGAAGTCATTGTGGCGTTTGCCATTTTGGCGTTGGCGCTGAGTTTGCTGCT
CGGTACCCTGACAGGTGGAACCCGTCAGGTGCGTCGGGCCGATTTGGCCTCGCAGGCCACGTTGTACGCGCAGTCGTTTC
TTGCCCAACAAGGCGTCGCTATGCCGTTGCATGTGCAGCATCAGCAGGGCCAGTTTGAGAACGGTCGTTTTCGTTGGATG
TTGGAGACGCGACCCTATGAGAATTCACCAGGCTCACCTGACGGTGCTCAATTGCTGGAGTTGATTCTGTCAGTGCGCTG
GGGCGATGAGCCTGATCAATCGTTGCAGTGGCGGACATTGCGCTTTGTGCGTCTGCAACCGCCTGGTGACGGACTATGA

Upstream 100 bases:

>100_bases
GACGTATCGATCTGGAAATGAAGCGTGCCTATTGGCGTATTGATGTGGGTTGGATCACCGGTGAGGTGCGTTCCGGACCG
TTGCGGACATCTGCATCATT

Downstream 100 bases:

>100_bases
GACGGATGGCCGGTTTCACCTTGATGGAGGTGCTTTTGGCAACCGTGCTACTGGCCAGTGGTCTTACGCTGGCTTTTGTG
ACGTTGCACTCTGCCAGCAT

Product: general secretion pathway protein I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVAMPLHVQHQQGQFENGRFRWM
LETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTLRFVRLQPPGDGL

Sequences:

>Translated_132_residues
MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVAMPLHVQHQQGQFENGRFRWM
LETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTLRFVRLQPPGDGL
>Mature_132_residues
MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVAMPLHVQHQQGQFENGRFRWM
LETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTLRFVRLQPPGDGL

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 14764; Mature: 14764

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
MPLHVQHQQGQFENGRFRWMLETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTL
CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
RFVRLQPPGDGL
EEEEECCCCCCC
>Mature Secondary Structure
MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
MPLHVQHQQGQFENGRFRWMLETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTL
CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
RFVRLQPPGDGL
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1944223; 12024217 [H]