| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is xpsI [H]
Identifier: 182681326
GI number: 182681326
Start: 913342
End: 913740
Strand: Direct
Name: xpsI [H]
Synonym: XfasM23_0773
Alternate gene names: 182681326
Gene position: 913342-913740 (Clockwise)
Preceding gene: 182681325
Following gene: 182681327
Centisome position: 36.02
GC content: 56.39
Gene sequence:
>399_bases ATGAAGTGTCAGCGTGGTTACAGTTTGCTGGAAGTCATTGTGGCGTTTGCCATTTTGGCGTTGGCGCTGAGTTTGCTGCT CGGTACCCTGACAGGTGGAACCCGTCAGGTGCGTCGGGCCGATTTGGCCTCGCAGGCCACGTTGTACGCGCAGTCGTTTC TTGCCCAACAAGGCGTCGCTATGCCGTTGCATGTGCAGCATCAGCAGGGCCAGTTTGAGAACGGTCGTTTTCGTTGGATG TTGGAGACGCGACCCTATGAGAATTCACCAGGCTCACCTGACGGTGCTCAATTGCTGGAGTTGATTCTGTCAGTGCGCTG GGGCGATGAGCCTGATCAATCGTTGCAGTGGCGGACATTGCGCTTTGTGCGTCTGCAACCGCCTGGTGACGGACTATGA
Upstream 100 bases:
>100_bases GACGTATCGATCTGGAAATGAAGCGTGCCTATTGGCGTATTGATGTGGGTTGGATCACCGGTGAGGTGCGTTCCGGACCG TTGCGGACATCTGCATCATT
Downstream 100 bases:
>100_bases GACGGATGGCCGGTTTCACCTTGATGGAGGTGCTTTTGGCAACCGTGCTACTGGCCAGTGGTCTTACGCTGGCTTTTGTG ACGTTGCACTCTGCCAGCAT
Product: general secretion pathway protein I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVAMPLHVQHQQGQFENGRFRWM LETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTLRFVRLQPPGDGL
Sequences:
>Translated_132_residues MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVAMPLHVQHQQGQFENGRFRWM LETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTLRFVRLQPPGDGL >Mature_132_residues MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVAMPLHVQHQQGQFENGRFRWM LETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTLRFVRLQPPGDGL
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 14764; Mature: 14764
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC MPLHVQHQQGQFENGRFRWMLETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTL CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE RFVRLQPPGDGL EEEEECCCCCCC >Mature Secondary Structure MKCQRGYSLLEVIVAFAILALALSLLLGTLTGGTRQVRRADLASQATLYAQSFLAQQGVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC MPLHVQHQQGQFENGRFRWMLETRPYENSPGSPDGAQLLELILSVRWGDEPDQSLQWRTL CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE RFVRLQPPGDGL EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1944223; 12024217 [H]