| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yusP [H]
Identifier: 182680390
GI number: 182680390
Start: 3965102
End: 3966613
Strand: Reverse
Name: yusP [H]
Synonym: Bind_3490
Alternate gene names: 182680390
Gene position: 3966613-3965102 (Counterclockwise)
Preceding gene: 182680391
Following gene: 182680389
Centisome position: 95.12
GC content: 61.64
Gene sequence:
>1512_bases GTGTCCGAGTCTCCCTCCGGCTTTCCCCAATCGCCCTCCGGACCCTCCACGGTTCCGGCCGCCGCGTCAGCGCCGCTGAC GCGCTCGGAAATTCTCTGGATTTTCTCAGGCCTCATGCTCGCCATGTTGCTGAGCTCGATGGACCAGACCATTGTCGCGA CGGCCATGCCGACGATCGGCCGTGATCTTGGCGATGTCGAACATCTGCCTTGGGTCGTGACCGCTTATCTTCTGGCGGCG ACCGCCGCCACGCCGCTTGGCGGTAAGCTGGCCGATATTTACGGCCGCCGCATTATCCTGCTCACCTCGCTCGGCCTGTT TCTCTTGGGGTCCATCGCCTGTGGCCTTGCGCGGTCCATGACCCTTTTGATCCTGGCGCGCGGCCTCCAGGGTCTGGGGG GCGGCGGTCTGATCTCGCTGGCGCAAACCATCATTGCCGACCTCGTCACCCCGCGCGAGCGCGCGACCTATCAGATCCAT ATCGCCTCGGTTTTCATGGCTTCGAGCCTTGGCGGCCCGGTGCTTGGCGGTTTTCTGGCGCAGCATGGCCATTGGTCGCT GATTTTCTGGATCAATATCCCCTTCAGCCTCGCCGCTTTGTTCATGTGCGGCAAATATTTGCGCAAGCTGCCGCGGCGCG AGCATCCTCACAAGCTCGATCTCGTCGGCGCCGTCTTGCTCCTCACCGCGACGACGAGTCTTTTGCTCGCCTTGAGTACC GGCGCGGCGCAGGGGTGGACGTCGCCCTTTGTGGCGATGCTTATCGTGCTGAGCCTTGTGAGTTGGACAAGCCTCATCTT TTGGCTGCACAGGACCGCCGAGCCCCTGATCCCGATTGCCCTGCTGCATGATAATGTCGTTGCCCGCGCCACGCTCGGGG CCTCGCTTAGCATCGGCGTCTTCATCTCCCTGTCGATCTATATGCCGCTCTATTTCGAGGCCTATCGCCATTTGAGCGCG AGCCAGTCGGGCCTTGCTCTTCTGCCGCTCATGGCCGGCACGGTCATTGGCTCGACCCTATCTGGCCGGCTCATGATCAG GGTGATCCATTATAAGCGCGTGCCGCTCGCGGGGCTTGCTATTGCCTTTAGCGCCACCTGTCTGCTCGCTGCCGAGTCGA TGACCCTGCCCTTGCCCTGGCTCTCCATCATTCTGGGTCTGGTCAGCATGGGGCTCGGCCTCGTTTTGACCATTTCGACG GTTTCGGTCCAGAATGCGACGCCCCCGCATCAGCTCGGCACCGCGACGGCAGTGATGAATCTCTGTCGTCAGCTCGTCGC TGCAATCATCGTCGCGATTTTCGGCGCCATGATTCTTGGCTCGGGGCGAGGCGTGGAGAGTGTTTCGGCCGAGGGTTTGA GCCCTGACGAACAAAGGCTGCTTGGTTCCTCTTACACCTACGTCTTCATTGCCGCCGCTGGTCTTATGGCGATCGCTTTT TGCGCCTATTTGCGCATGGAGGAGCGGCCGCTGACCGGATCGCGGTCATCCGACCACCCTGCTTCTTCCTAA
Upstream 100 bases:
>100_bases CGGCCAAGGCAGCCCGTTACGGCGAGGCCATGCTTGCTGTCGTCGCCCGTCACGAACAAGCCTGAATAGTGCAAACTCGA AGATCCAACCAAGGTCTCGC
Downstream 100 bases:
>100_bases AGCCCGCCGCTGATGGGGCTTCTCATGCCATCGCTCATATTGTAGAGCCTGATCCGCGCAAAAGGGAGCAAGATGCATGA CGCAAGCGGAGACGGCGATT
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MSESPSGFPQSPSGPSTVPAAASAPLTRSEILWIFSGLMLAMLLSSMDQTIVATAMPTIGRDLGDVEHLPWVVTAYLLAA TAATPLGGKLADIYGRRIILLTSLGLFLLGSIACGLARSMTLLILARGLQGLGGGGLISLAQTIIADLVTPRERATYQIH IASVFMASSLGGPVLGGFLAQHGHWSLIFWINIPFSLAALFMCGKYLRKLPRREHPHKLDLVGAVLLLTATTSLLLALST GAAQGWTSPFVAMLIVLSLVSWTSLIFWLHRTAEPLIPIALLHDNVVARATLGASLSIGVFISLSIYMPLYFEAYRHLSA SQSGLALLPLMAGTVIGSTLSGRLMIRVIHYKRVPLAGLAIAFSATCLLAAESMTLPLPWLSIILGLVSMGLGLVLTIST VSVQNATPPHQLGTATAVMNLCRQLVAAIIVAIFGAMILGSGRGVESVSAEGLSPDEQRLLGSSYTYVFIAAAGLMAIAF CAYLRMEERPLTGSRSSDHPASS
Sequences:
>Translated_503_residues MSESPSGFPQSPSGPSTVPAAASAPLTRSEILWIFSGLMLAMLLSSMDQTIVATAMPTIGRDLGDVEHLPWVVTAYLLAA TAATPLGGKLADIYGRRIILLTSLGLFLLGSIACGLARSMTLLILARGLQGLGGGGLISLAQTIIADLVTPRERATYQIH IASVFMASSLGGPVLGGFLAQHGHWSLIFWINIPFSLAALFMCGKYLRKLPRREHPHKLDLVGAVLLLTATTSLLLALST GAAQGWTSPFVAMLIVLSLVSWTSLIFWLHRTAEPLIPIALLHDNVVARATLGASLSIGVFISLSIYMPLYFEAYRHLSA SQSGLALLPLMAGTVIGSTLSGRLMIRVIHYKRVPLAGLAIAFSATCLLAAESMTLPLPWLSIILGLVSMGLGLVLTIST VSVQNATPPHQLGTATAVMNLCRQLVAAIIVAIFGAMILGSGRGVESVSAEGLSPDEQRLLGSSYTYVFIAAAGLMAIAF CAYLRMEERPLTGSRSSDHPASS >Mature_502_residues SESPSGFPQSPSGPSTVPAAASAPLTRSEILWIFSGLMLAMLLSSMDQTIVATAMPTIGRDLGDVEHLPWVVTAYLLAAT AATPLGGKLADIYGRRIILLTSLGLFLLGSIACGLARSMTLLILARGLQGLGGGGLISLAQTIIADLVTPRERATYQIHI ASVFMASSLGGPVLGGFLAQHGHWSLIFWINIPFSLAALFMCGKYLRKLPRREHPHKLDLVGAVLLLTATTSLLLALSTG AAQGWTSPFVAMLIVLSLVSWTSLIFWLHRTAEPLIPIALLHDNVVARATLGASLSIGVFISLSIYMPLYFEAYRHLSAS QSGLALLPLMAGTVIGSTLSGRLMIRVIHYKRVPLAGLAIAFSATCLLAAESMTLPLPWLSIILGLVSMGLGLVLTISTV SVQNATPPHQLGTATAVMNLCRQLVAAIIVAIFGAMILGSGRGVESVSAEGLSPDEQRLLGSSYTYVFIAAAGLMAIAFC AYLRMEERPLTGSRSSDHPASS
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=412, Percent_Identity=27.4271844660194, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1788710, Length=423, Percent_Identity=26.241134751773, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI87081983, Length=409, Percent_Identity=28.6063569682152, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1790195, Length=458, Percent_Identity=25.764192139738, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788392, Length=431, Percent_Identity=27.3781902552204, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790146, Length=166, Percent_Identity=30.7228915662651, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323735, Length=320, Percent_Identity=28.75, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6319770, Length=413, Percent_Identity=27.1186440677966, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6325455, Length=233, Percent_Identity=29.1845493562232, Blast_Score=87, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6322958, Length=165, Percent_Identity=30.3030303030303, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6321663, Length=229, Percent_Identity=24.4541484716157, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53021; Mature: 52889
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESPSGFPQSPSGPSTVPAAASAPLTRSEILWIFSGLMLAMLLSSMDQTIVATAMPTIG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDLGDVEHLPWVVTAYLLAATAATPLGGKLADIYGRRIILLTSLGLFLLGSIACGLARSM CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TLLILARGLQGLGGGGLISLAQTIIADLVTPRERATYQIHIASVFMASSLGGPVLGGFLA HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHH QHGHWSLIFWINIPFSLAALFMCGKYLRKLPRREHPHKLDLVGAVLLLTATTSLLLALST CCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GAAQGWTSPFVAMLIVLSLVSWTSLIFWLHRTAEPLIPIALLHDNVVARATLGASLSIGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHCCCCEEHHH FISLSIYMPLYFEAYRHLSASQSGLALLPLMAGTVIGSTLSGRLMIRVIHYKRVPLAGLA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHH IAFSATCLLAAESMTLPLPWLSIILGLVSMGLGLVLTISTVSVQNATPPHQLGTATAVMN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCHHHHHHHHHHH LCRQLVAAIIVAIFGAMILGSGRGVESVSAEGLSPDEQRLLGSSYTYVFIAAAGLMAIAF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH CAYLRMEERPLTGSRSSDHPASS HHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SESPSGFPQSPSGPSTVPAAASAPLTRSEILWIFSGLMLAMLLSSMDQTIVATAMPTIG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDLGDVEHLPWVVTAYLLAATAATPLGGKLADIYGRRIILLTSLGLFLLGSIACGLARSM CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TLLILARGLQGLGGGGLISLAQTIIADLVTPRERATYQIHIASVFMASSLGGPVLGGFLA HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHH QHGHWSLIFWINIPFSLAALFMCGKYLRKLPRREHPHKLDLVGAVLLLTATTSLLLALST CCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GAAQGWTSPFVAMLIVLSLVSWTSLIFWLHRTAEPLIPIALLHDNVVARATLGASLSIGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHCCCCEEHHH FISLSIYMPLYFEAYRHLSASQSGLALLPLMAGTVIGSTLSGRLMIRVIHYKRVPLAGLA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHH IAFSATCLLAAESMTLPLPWLSIILGLVSMGLGLVLTISTVSVQNATPPHQLGTATAVMN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCHHHHHHHHHHH LCRQLVAAIIVAIFGAMILGSGRGVESVSAEGLSPDEQRLLGSSYTYVFIAAAGLMAIAF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH CAYLRMEERPLTGSRSSDHPASS HHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]