| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is hemH [H]
Identifier: 182680376
GI number: 182680376
Start: 3951741
End: 3952802
Strand: Reverse
Name: hemH [H]
Synonym: Bind_3476
Alternate gene names: 182680376
Gene position: 3952802-3951741 (Counterclockwise)
Preceding gene: 182680377
Following gene: 182680368
Centisome position: 94.79
GC content: 60.64
Gene sequence:
>1062_bases ATGAAACCCCTTGCCGCTTCTACGACGAAAGCGCGTCTGACGGACCGAATCGGTGTTCTGCTTGTCAATCTCGGAACGCC GGATGCGACCGATTACTGGTCCATGCGCCGTTATCTCCGCGAATTCCTGTCCGACCGCCGGGTGGTCGAACTGCCGCGCT GGGTCTGGTGGCCAATCCTGCATGGGATTATCCTCACCACGCGCCCGCATCGGAGCGGACGCCGCTATGCCGGGATCTGG GACAAGGAGCGTAACGAGAGCCCGCTCAAAACCATCACCCGCGCGCAAGGGGAACTCCTGGCTCGTTCGATTGGCGCCTC ATCCGCGCCAGGGGACGGAAAAGCGCAAGATATCGTGATTGATTTCGCGATGCGATATGGCAATCCTTCGATCGCTTCGG GTCTCGATCGCCTGTTGCAACAGAATTGCGGCCGCATTCTTGTCGTGCCGCTCTATCCGCAATATGCAGCGGCGACCACG GCGAGCGTCGCGGATAAGGTTTTCGAGATTTTGCGGGCGCGGCGCTGGCAGCCGGCCTTGCGGATTGCACCCCCCTATTA TGCCGAGCCCTTCTATATAGAAGCCTTGGCGCGTTCCGTGCGGCGCGGTCTCGCCGGGCTTGATTTCGAGCCGGACGCGA TCCTTTTGTCTTTTCACGGCATTCCGAAATCCTCCGTCGACAAGGGCGATCCCTATTATGAGCATTGCCTGATCACGGCG GATTTGTTGCGGCAAGCCCTGGGTCTCGACGAGGCGCATTGCGTGACGACTTTTCAATCCCGCTTCGGCCGCGCCGAATG GATCGGACCCGCGACCGATGCGACGGTGAAAGCTTTGGCCGCGCGAGGTGTCAAAAAACTGGCTGTCGTCATGCCAGGTT TTGCCGCCGATTGCCTGGAAACAATCGAGGAAGTGGGCGGGGAGATCCGCGCCTTATTCCTGGGCGCGGGGGGCGAGGAT TATGCCGCGCTCCCCTGCCTCAACGCGAGCGAGGAGGGCATGGAGGTTATTGCCCGGCTGGTTCGGCGTGAATTGCAAGG CTGGCTGACCTCAACAGATTAG
Upstream 100 bases:
>100_bases ATGACCCGTCGCTCCACGCCCTTGGCCTCGACAACGGTCGAATGGCTGGCGTCCCTTCTGCCCCAATCGACGGCCTCATA AGCGGGAATTGAGTGTGAGT
Downstream 100 bases:
>100_bases TCACGTCCCGCGATTGCCAGCACGCTGGCGTCCCTCGCTCACCCAGGTCAGGATGAACGCGCTCAACAGCACGGCAAGCC CGAGGAAGCCAATGGCCAAA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKPLAASTTKARLTDRIGVLLVNLGTPDATDYWSMRRYLREFLSDRRVVELPRWVWWPILHGIILTTRPHRSGRRYAGIW DKERNESPLKTITRAQGELLARSIGASSAPGDGKAQDIVIDFAMRYGNPSIASGLDRLLQQNCGRILVVPLYPQYAAATT ASVADKVFEILRARRWQPALRIAPPYYAEPFYIEALARSVRRGLAGLDFEPDAILLSFHGIPKSSVDKGDPYYEHCLITA DLLRQALGLDEAHCVTTFQSRFGRAEWIGPATDATVKALAARGVKKLAVVMPGFAADCLETIEEVGGEIRALFLGAGGED YAALPCLNASEEGMEVIARLVRRELQGWLTSTD
Sequences:
>Translated_353_residues MKPLAASTTKARLTDRIGVLLVNLGTPDATDYWSMRRYLREFLSDRRVVELPRWVWWPILHGIILTTRPHRSGRRYAGIW DKERNESPLKTITRAQGELLARSIGASSAPGDGKAQDIVIDFAMRYGNPSIASGLDRLLQQNCGRILVVPLYPQYAAATT ASVADKVFEILRARRWQPALRIAPPYYAEPFYIEALARSVRRGLAGLDFEPDAILLSFHGIPKSSVDKGDPYYEHCLITA DLLRQALGLDEAHCVTTFQSRFGRAEWIGPATDATVKALAARGVKKLAVVMPGFAADCLETIEEVGGEIRALFLGAGGED YAALPCLNASEEGMEVIARLVRRELQGWLTSTD >Mature_353_residues MKPLAASTTKARLTDRIGVLLVNLGTPDATDYWSMRRYLREFLSDRRVVELPRWVWWPILHGIILTTRPHRSGRRYAGIW DKERNESPLKTITRAQGELLARSIGASSAPGDGKAQDIVIDFAMRYGNPSIASGLDRLLQQNCGRILVVPLYPQYAAATT ASVADKVFEILRARRWQPALRIAPPYYAEPFYIEALARSVRRGLAGLDFEPDAILLSFHGIPKSSVDKGDPYYEHCLITA DLLRQALGLDEAHCVTTFQSRFGRAEWIGPATDATVKALAARGVKKLAVVMPGFAADCLETIEEVGGEIRALFLGAGGED YAALPCLNASEEGMEVIARLVRRELQGWLTSTD
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=294, Percent_Identity=25.5102040816327, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI60499021, Length=294, Percent_Identity=25.5102040816327, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI1786681, Length=326, Percent_Identity=43.2515337423313, Blast_Score=256, Evalue=2e-69, Organism=Drosophila melanogaster, GI17864156, Length=301, Percent_Identity=25.5813953488372, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24651774, Length=271, Percent_Identity=24.7232472324723, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39066; Mature: 39066
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLAASTTKARLTDRIGVLLVNLGTPDATDYWSMRRYLREFLSDRRVVELPRWVWWPIL CCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH HGIILTTRPHRSGRRYAGIWDKERNESPLKTITRAQGELLARSIGASSAPGDGKAQDIVI HCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DFAMRYGNPSIASGLDRLLQQNCGRILVVPLYPQYAAATTASVADKVFEILRARRWQPAL HHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCE RIAPPYYAEPFYIEALARSVRRGLAGLDFEPDAILLSFHGIPKSSVDKGDPYYEHCLITA EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH DLLRQALGLDEAHCVTTFQSRFGRAEWIGPATDATVKALAARGVKKLAVVMPGFAADCLE HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHH TIEEVGGEIRALFLGAGGEDYAALPCLNASEEGMEVIARLVRRELQGWLTSTD HHHHHCCCEEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKPLAASTTKARLTDRIGVLLVNLGTPDATDYWSMRRYLREFLSDRRVVELPRWVWWPIL CCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH HGIILTTRPHRSGRRYAGIWDKERNESPLKTITRAQGELLARSIGASSAPGDGKAQDIVI HCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DFAMRYGNPSIASGLDRLLQQNCGRILVVPLYPQYAAATTASVADKVFEILRARRWQPAL HHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCE RIAPPYYAEPFYIEALARSVRRGLAGLDFEPDAILLSFHGIPKSSVDKGDPYYEHCLITA EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH DLLRQALGLDEAHCVTTFQSRFGRAEWIGPATDATVKALAARGVKKLAVVMPGFAADCLE HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHH TIEEVGGEIRALFLGAGGEDYAALPCLNASEEGMEVIARLVRRELQGWLTSTD HHHHHCCCEEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA