| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is cga [H]
Identifier: 182680331
GI number: 182680331
Start: 3894887
End: 3897034
Strand: Reverse
Name: cga [H]
Synonym: Bind_3431
Alternate gene names: 182680331
Gene position: 3897034-3894887 (Counterclockwise)
Preceding gene: 182680336
Following gene: 182680328
Centisome position: 93.45
GC content: 58.47
Gene sequence:
>2148_bases GTGAAATTGAAATGTTTTGCTGCGGCCCTTGCCGTAGCTTCGGCCACCCTTTCCACGGCTCATGCGCAAAGCATCGCGCC TGGCGCGCCGGGCTATAAGCAGGGTTGGAGCCCCGCCAACAAACAGGGCTTCGGCACCTCCACTACCCATGAGAGCAATG TTTGGTTCACACTCGGCGGCAGCGGGCTGACGGATGTTTATTTTCCGAGAATAGATACGCCAAGCATCCGCGATTTGCAG TTCGTCGTCTCGGACGGCCGGACGTTCGCCGAGCGCGAGAGCGAAGCCACGCGGTACCACGTGGAATTGGCCGCTCCTCA CAGCCTTGTCTATAGACAGATCAATACCGCCAATAACAAACGCTATCGGCTCACCAAGACTTATTCAACGGATCCAGAGC GCGCCGTCCTTCTCGTTGATGTAACCTTCGAGTCGCTGGATGGCCATCCTTATCAACTCTATGCACTGCTCAATCCAGCT CCCGGCAATGACCAGATGCACACGCATGGCGAGACATTCCATCATGCTCTCGTGGCCAGCAATGGCAATGTTGCCAGTGC CTTCACGGCCGATCCGCCCTTCACCCGTACATCGAACGGCTATCTTGGCGTGAGTGATGGCTGGCAGGACCTGAGCAGCC ATCACCATATGGAGTGGACCTATGTGGTCGCCGATCAAGGCAATGTCGTGCAGACCGGACAGACAACGCTCGACGGTGTG ACACGCAAGCATTTGACGATTGCCATTGGCTTTGGGAGCACAACGACGCAAGCGGCAAGCCAGGCGCAAGATGCGTTGCG CACCGGCTTCGACCGCATCGCCCAGGCTTATGCCTATGGCTGGCGCCGCTATCTTGCTTCGCTGAAACCGACACCGGCAA GCGCCCACGACCAGAAAGAACTTTATGAAACGTCACTGATGGTCTTGGCCGCCGTTGAGGACAAGACCTACAAAGGAGCG TTTGTCGCCTCTCCCACCATGCCATGGGCGTTCGGCGACGGGCTCGATAATCCATCGGATGCCTACCACCTCGTCTGGTC CAGGGATCTCTATCAGATCGCTTCCGCGCTGCTCGCGGCGGGCGACCGCGGTGCGGCCGAGCGGGCGCTTGCCTACCTCT TCGATCACCAGCAAAAGCCCGATGGTTCATTCCCGCAGAATTCGCTCGTGGACGGCACCCCCATTTGGGGTGGCCTGCAA ATGGACGAAGTCGCATTTCCCATTCTGCTGGCATGGCAATTGGGCCGCTTCGACGGAGCGACCTATACAGGCCATGTCAA GAAAGCCGCCGACTTCATCATTGGGCATGGACCTGTCAGTCAAGCAGAGCGTTGGGAAAACCAAGGCGGTTATTCGCCCG CGACAATTGCCGCCGAGATTGCCGGTTTGATCTGCGCGGCCGATATCGCGCGCCGCAATGGCGATGAGGCCTCGGCTCGC ACTTATGAATCCACCGCCGATACATGGAAAGGTAAAATCGAGACTTGGACAACCACGCAGACAGGTCCGTTTTCCAAATC GCCTTATTACCTGCGCCTGACCAAGGATGGCCAAGGGAACTCAGGGACCACCTACAATATCGGTGACAGCGGTCCAGATG GTGTCGATCAGCGCGCAGTTGTCGATCCAAGCTTTCTCGAACTGGTGCGGCTCGGCATCAAGGCCGCGGATGACCCCATT ATCTTGAATACGCTGCCTGTCGTCGATACACAGCTCGGGACCACGACACCCACGGGGACATTCTGGCATCGCTATAATTT CGACGGTTATGGAGAAAAACGCGATGGCAGCGAATGGAACATCGGTTTCCCCGCCGGCAGCCAAGCAACGATCGGTAGGC TGTGGCCTATTTTCGCGGGTGAGCGCGGCGAATACGACTTGCTGGCCAAGAATCCCGACTCAGCCCGTGCGCGCCTGAAG GCGATGGCGGCGACCGCGAATGACGGGCTGCTCATTCCTGAACAAGTCTGGGACCTCAATCCCCCGTCCGGCCAACCGGA TTTCCTTCCCGGTCACCCCACCACTTCCGCCACTCCATTAGCATGGTCGCATGCCCAATTCGTCAGGCTCGCCTGGTCTA TCGACCACGGCTATCCCCTGGAGCAGCCCGCGATCGTGGCGTGCCGCTACGCGCATCAATGTAAATAG
Upstream 100 bases:
>100_bases GCGCGCCGAATAATTCCTTGCGCGATCCAGCCAAGGACAATCTCCCTTCGTCACGATCGAGAGTGCGAAGGAAATTTCAA AAATAGAGGGAGACGATACC
Downstream 100 bases:
>100_bases CTGAAAGGAGGCCGCAGGTGTTTCCTTATCCGGAAAGAAGTGCGGCCCCCATGCGTGAGCATCCCCGGATGGGAGACATT CGGGAATGCGACCGACCCCG
Product: glucan 1,4-alpha-glucosidase
Products: NA
Alternate protein names: 1,4-alpha-D-glucan glucohydrolase; Glucan 1,4-alpha-glucosidase [H]
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MKLKCFAAALAVASATLSTAHAQSIAPGAPGYKQGWSPANKQGFGTSTTHESNVWFTLGGSGLTDVYFPRIDTPSIRDLQ FVVSDGRTFAERESEATRYHVELAAPHSLVYRQINTANNKRYRLTKTYSTDPERAVLLVDVTFESLDGHPYQLYALLNPA PGNDQMHTHGETFHHALVASNGNVASAFTADPPFTRTSNGYLGVSDGWQDLSSHHHMEWTYVVADQGNVVQTGQTTLDGV TRKHLTIAIGFGSTTTQAASQAQDALRTGFDRIAQAYAYGWRRYLASLKPTPASAHDQKELYETSLMVLAAVEDKTYKGA FVASPTMPWAFGDGLDNPSDAYHLVWSRDLYQIASALLAAGDRGAAERALAYLFDHQQKPDGSFPQNSLVDGTPIWGGLQ MDEVAFPILLAWQLGRFDGATYTGHVKKAADFIIGHGPVSQAERWENQGGYSPATIAAEIAGLICAADIARRNGDEASAR TYESTADTWKGKIETWTTTQTGPFSKSPYYLRLTKDGQGNSGTTYNIGDSGPDGVDQRAVVDPSFLELVRLGIKAADDPI ILNTLPVVDTQLGTTTPTGTFWHRYNFDGYGEKRDGSEWNIGFPAGSQATIGRLWPIFAGERGEYDLLAKNPDSARARLK AMAATANDGLLIPEQVWDLNPPSGQPDFLPGHPTTSATPLAWSHAQFVRLAWSIDHGYPLEQPAIVACRYAHQCK
Sequences:
>Translated_715_residues MKLKCFAAALAVASATLSTAHAQSIAPGAPGYKQGWSPANKQGFGTSTTHESNVWFTLGGSGLTDVYFPRIDTPSIRDLQ FVVSDGRTFAERESEATRYHVELAAPHSLVYRQINTANNKRYRLTKTYSTDPERAVLLVDVTFESLDGHPYQLYALLNPA PGNDQMHTHGETFHHALVASNGNVASAFTADPPFTRTSNGYLGVSDGWQDLSSHHHMEWTYVVADQGNVVQTGQTTLDGV TRKHLTIAIGFGSTTTQAASQAQDALRTGFDRIAQAYAYGWRRYLASLKPTPASAHDQKELYETSLMVLAAVEDKTYKGA FVASPTMPWAFGDGLDNPSDAYHLVWSRDLYQIASALLAAGDRGAAERALAYLFDHQQKPDGSFPQNSLVDGTPIWGGLQ MDEVAFPILLAWQLGRFDGATYTGHVKKAADFIIGHGPVSQAERWENQGGYSPATIAAEIAGLICAADIARRNGDEASAR TYESTADTWKGKIETWTTTQTGPFSKSPYYLRLTKDGQGNSGTTYNIGDSGPDGVDQRAVVDPSFLELVRLGIKAADDPI ILNTLPVVDTQLGTTTPTGTFWHRYNFDGYGEKRDGSEWNIGFPAGSQATIGRLWPIFAGERGEYDLLAKNPDSARARLK AMAATANDGLLIPEQVWDLNPPSGQPDFLPGHPTTSATPLAWSHAQFVRLAWSIDHGYPLEQPAIVACRYAHQCK >Mature_715_residues MKLKCFAAALAVASATLSTAHAQSIAPGAPGYKQGWSPANKQGFGTSTTHESNVWFTLGGSGLTDVYFPRIDTPSIRDLQ FVVSDGRTFAERESEATRYHVELAAPHSLVYRQINTANNKRYRLTKTYSTDPERAVLLVDVTFESLDGHPYQLYALLNPA PGNDQMHTHGETFHHALVASNGNVASAFTADPPFTRTSNGYLGVSDGWQDLSSHHHMEWTYVVADQGNVVQTGQTTLDGV TRKHLTIAIGFGSTTTQAASQAQDALRTGFDRIAQAYAYGWRRYLASLKPTPASAHDQKELYETSLMVLAAVEDKTYKGA FVASPTMPWAFGDGLDNPSDAYHLVWSRDLYQIASALLAAGDRGAAERALAYLFDHQQKPDGSFPQNSLVDGTPIWGGLQ MDEVAFPILLAWQLGRFDGATYTGHVKKAADFIIGHGPVSQAERWENQGGYSPATIAAEIAGLICAADIARRNGDEASAR TYESTADTWKGKIETWTTTQTGPFSKSPYYLRLTKDGQGNSGTTYNIGDSGPDGVDQRAVVDPSFLELVRLGIKAADDPI ILNTLPVVDTQLGTTTPTGTFWHRYNFDGYGEKRDGSEWNIGFPAGSQATIGRLWPIFAGERGEYDLLAKNPDSARARLK AMAATANDGLLIPEQVWDLNPPSGQPDFLPGHPTTSATPLAWSHAQFVRLAWSIDHGYPLEQPAIVACRYAHQCK
Specific function: CGA has typical kinetic properties for a glucoamylase, but this bacterial enzyme had higher isomaltose-hydrolyzing activity than other eukaryotic glucoamylases [H]
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006425 - InterPro: IPR015220 - InterPro: IPR011013 - InterPro: IPR014718 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF09137 Glucodextran_N; PF00723 Glyco_hydro_15 [H]
EC number: =3.2.1.3 [H]
Molecular weight: Translated: 77800; Mature: 77800
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKCFAAALAVASATLSTAHAQSIAPGAPGYKQGWSPANKQGFGTSTTHESNVWFTLGG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SGLTDVYFPRIDTPSIRDLQFVVSDGRTFAERESEATRYHVELAAPHSLVYRQINTANNK CCCCCEECCCCCCCCCCEEEEEEECCCHHHHCCCCCEEEEEEEECCHHHHHHHHCCCCCC RYRLTKTYSTDPERAVLLVDVTFESLDGHPYQLYALLNPAPGNDQMHTHGETFHHALVAS EEEEEEECCCCCCCEEEEEEEEEHHCCCCCEEEEEEECCCCCCCCCCCCCCHHEEEEEEC NGNVASAFTADPPFTRTSNGYLGVSDGWQDLSSHHHMEWTYVVADQGNVVQTGQTTLDGV CCCEEEEEECCCCCCCCCCCEEECCCCHHHHHCCCCEEEEEEEECCCCEEECCCHHHHCC TRKHLTIAIGFGSTTTQAASQAQDALRTGFDRIAQAYAYGWRRYLASLKPTPASAHDQKE CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LYETSLMVLAAVEDKTYKGAFVASPTMPWAFGDGLDNPSDAYHLVWSRDLYQIASALLAA HHHHHEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHC GDRGAAERALAYLFDHQQKPDGSFPQNSLVDGTPIWGGLQMDEVAFPILLAWQLGRFDGA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCC TYTGHVKKAADFIIGHGPVSQAERWENQGGYSPATIAAEIAGLICAADIARRNGDEASAR EEECCHHHHHHEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH TYESTADTWKGKIETWTTTQTGPFSKSPYYLRLTKDGQGNSGTTYNIGDSGPDGVDQRAV HHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCEE VDPSFLELVRLGIKAADDPIILNTLPVVDTQLGTTTPTGTFWHRYNFDGYGEKRDGSEWN CCHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEE IGFPAGSQATIGRLWPIFAGERGEYDLLAKNPDSARARLKAMAATANDGLLIPEQVWDLN EECCCCCCCCHHHEEEEECCCCCCEEEEECCCCHHHHHHHHHEEECCCCEECHHHHHCCC PPSGQPDFLPGHPTTSATPLAWSHAQFVRLAWSIDHGYPLEQPAIVACRYAHQCK CCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCCCCCCCEEEEHHHHCCC >Mature Secondary Structure MKLKCFAAALAVASATLSTAHAQSIAPGAPGYKQGWSPANKQGFGTSTTHESNVWFTLGG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SGLTDVYFPRIDTPSIRDLQFVVSDGRTFAERESEATRYHVELAAPHSLVYRQINTANNK CCCCCEECCCCCCCCCCEEEEEEECCCHHHHCCCCCEEEEEEEECCHHHHHHHHCCCCCC RYRLTKTYSTDPERAVLLVDVTFESLDGHPYQLYALLNPAPGNDQMHTHGETFHHALVAS EEEEEEECCCCCCCEEEEEEEEEHHCCCCCEEEEEEECCCCCCCCCCCCCCHHEEEEEEC NGNVASAFTADPPFTRTSNGYLGVSDGWQDLSSHHHMEWTYVVADQGNVVQTGQTTLDGV CCCEEEEEECCCCCCCCCCCEEECCCCHHHHHCCCCEEEEEEEECCCCEEECCCHHHHCC TRKHLTIAIGFGSTTTQAASQAQDALRTGFDRIAQAYAYGWRRYLASLKPTPASAHDQKE CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LYETSLMVLAAVEDKTYKGAFVASPTMPWAFGDGLDNPSDAYHLVWSRDLYQIASALLAA HHHHHEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHC GDRGAAERALAYLFDHQQKPDGSFPQNSLVDGTPIWGGLQMDEVAFPILLAWQLGRFDGA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCC TYTGHVKKAADFIIGHGPVSQAERWENQGGYSPATIAAEIAGLICAADIARRNGDEASAR EEECCHHHHHHEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH TYESTADTWKGKIETWTTTQTGPFSKSPYYLRLTKDGQGNSGTTYNIGDSGPDGVDQRAV HHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCEE VDPSFLELVRLGIKAADDPIILNTLPVVDTQLGTTTPTGTFWHRYNFDGYGEKRDGSEWN CCHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEE IGFPAGSQATIGRLWPIFAGERGEYDLLAKNPDSARARLKAMAATANDGLLIPEQVWDLN EECCCCCCCCHHHEEEEECCCCCCEEEEECCCCHHHHHHHHHEEECCCCEECHHHHHCCC PPSGQPDFLPGHPTTSATPLAWSHAQFVRLAWSIDHGYPLEQPAIVACRYAHQCK CCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCCCCCCCEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1633799 [H]