| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680274
Identifier: 182680274
GI number: 182680274
Start: 3829013
End: 3829786
Strand: Reverse
Name: 182680274
Synonym: Bind_3374
Alternate gene names: NA
Gene position: 3829786-3829013 (Counterclockwise)
Preceding gene: 182680275
Following gene: 182680273
Centisome position: 91.84
GC content: 59.95
Gene sequence:
>774_bases ATGGGTCAATTTAAACTGTGTCTGCCGGTCACGTTGCGATGGGAAGGCGGCAAAAGCAACGATCCGCGTGATCCTGGTGG GGCGACACAGGATGGCATCACACAAGCCACCTATAACGCCTCGCGTGATCGTCACAATCTGCCCCATCAATCGGTTTTCA AAATGACCGCGGCGGAGCGCGATGCGATCTATCGCGAAGATTATTGGAACAAGATGCTCTGCGACGCGATGGCGCCAGGC GTCAATCTTGTGACCTTTGATGCCGGCGTCAATTCCGGCATCCAGCGGGCCTTGAACTGGAAAGCGGCGGCCGCGAGCTC TGATCGTGTCCAGACGATCAAGGGCATTTGTGCGCGGAGGCTCTCCTTTGTTGAGGGTCTGAAAACCTTTCCCATTTTTG GGAAGGGTTGGCGCAATCGCATCGCGGGGATCGAGGCGACGGCCATGACCATGGCGGCTGGCACCGTTGCAAAGACGGTC CTGAGCGTCGAGGCACGCAGCGCGCGATCGAAAGCAGCGACAGCCAAGGCCCTGGCTAAAACTGTGCCCGCCGGTGCCGG AGGCGTCGAAGCGACGCATCAGATCGCTGGCGGCGGCCATCTCTGGTTGACCTTGCTGCTGATCGCACTGACGGGCGCCG CGATCGCCATCCTGATCATCCGCCACAAGATCCAGGCTAGCCGTGCGCAAGCGCTCGAAGGCGCGGCCATCACGCTTTCG ATGCCGGCGGCGACAGTCATTCCGACCGACAAAAAGGAGAGTGTGGGTGTTTAA
Upstream 100 bases:
>100_bases GCGGCTCCGGCGACGGATCTGCCGCCCGGCTCTGCCTGATCCTCTCCACTCTATCGCAATCACAGGGCGCCTTCGGGCGC CCTTTTTCATGGAGATGACA
Downstream 100 bases:
>100_bases TTTTCTGTTGCTGATGGCGCTCGGCATCGCGGGCGTCGTCTATATGGGACCCAAGATCAAGGCCTATCAGGCGTCGATCG GCGTCCTTGATGCGCTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MGQFKLCLPVTLRWEGGKSNDPRDPGGATQDGITQATYNASRDRHNLPHQSVFKMTAAERDAIYREDYWNKMLCDAMAPG VNLVTFDAGVNSGIQRALNWKAAAASSDRVQTIKGICARRLSFVEGLKTFPIFGKGWRNRIAGIEATAMTMAAGTVAKTV LSVEARSARSKAATAKALAKTVPAGAGGVEATHQIAGGGHLWLTLLLIALTGAAIAILIIRHKIQASRAQALEGAAITLS MPAATVIPTDKKESVGV
Sequences:
>Translated_257_residues MGQFKLCLPVTLRWEGGKSNDPRDPGGATQDGITQATYNASRDRHNLPHQSVFKMTAAERDAIYREDYWNKMLCDAMAPG VNLVTFDAGVNSGIQRALNWKAAAASSDRVQTIKGICARRLSFVEGLKTFPIFGKGWRNRIAGIEATAMTMAAGTVAKTV LSVEARSARSKAATAKALAKTVPAGAGGVEATHQIAGGGHLWLTLLLIALTGAAIAILIIRHKIQASRAQALEGAAITLS MPAATVIPTDKKESVGV >Mature_256_residues GQFKLCLPVTLRWEGGKSNDPRDPGGATQDGITQATYNASRDRHNLPHQSVFKMTAAERDAIYREDYWNKMLCDAMAPGV NLVTFDAGVNSGIQRALNWKAAAASSDRVQTIKGICARRLSFVEGLKTFPIFGKGWRNRIAGIEATAMTMAAGTVAKTVL SVEARSARSKAATAKALAKTVPAGAGGVEATHQIAGGGHLWLTLLLIALTGAAIAILIIRHKIQASRAQALEGAAITLSM PAATVIPTDKKESVGV
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27164; Mature: 27032
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQFKLCLPVTLRWEGGKSNDPRDPGGATQDGITQATYNASRDRHNLPHQSVFKMTAAER CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH DAIYREDYWNKMLCDAMAPGVNLVTFDAGVNSGIQRALNWKAAAASSDRVQTIKGICARR HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCHHHHCCCCHHHHHHHHHHHHH LSFVEGLKTFPIFGKGWRNRIAGIEATAMTMAAGTVAKTVLSVEARSARSKAATAKALAK HHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVPAGAGGVEATHQIAGGGHLWLTLLLIALTGAAIAILIIRHKIQASRAQALEGAAITLS HCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE MPAATVIPTDKKESVGV CCCEEECCCCCCCCCCC >Mature Secondary Structure GQFKLCLPVTLRWEGGKSNDPRDPGGATQDGITQATYNASRDRHNLPHQSVFKMTAAER CCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH DAIYREDYWNKMLCDAMAPGVNLVTFDAGVNSGIQRALNWKAAAASSDRVQTIKGICARR HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCHHHHCCCCHHHHHHHHHHHHH LSFVEGLKTFPIFGKGWRNRIAGIEATAMTMAAGTVAKTVLSVEARSARSKAATAKALAK HHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVPAGAGGVEATHQIAGGGHLWLTLLLIALTGAAIAILIIRHKIQASRAQALEGAAITLS HCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE MPAATVIPTDKKESVGV CCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA