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The map label for this gene is ureD

Identifier: 182680210

GI number: 182680210

Start: 3765284

End: 3766096

Strand: Reverse

Name: ureD

Synonym: Bind_3308

Alternate gene names: 182680210

Gene position: 3766096-3765284 (Counterclockwise)

Preceding gene: 182680211

Following gene: 182680209

Centisome position: 90.31

GC content: 61.38

Gene sequence:

>813_bases
ATGACCATGAGCTTTGCGGCCAATCGCGCTCGCGGCGAAATTCGCGTCCGCTACGAAAAGCATGGCGGTATCACGCGGCC
GTTGCGCCTGTTCGAAACGGGGGGCTTGCGTCTGCGCCATCCCCGCGCGTTTCAGGGATGCGTTGGCATGATCGTGAACA
GTGCGGGCGGCATCGCGGGGGGCGACCATCTGCGGCTTGCGATCGAGGCGGAAGAGCAGAGCGAACTTGTCATCGCAACA
CCTGCCGCCGAAAAAATCTATCGTGCGCGAGACAAAGCGGCAATGCTCGATCTATCGCTGGTGCTGGCCCCAGAGACGAA
ACTTGCTTTTTTACCGCAGGAAACGATTCTTTTTGATGGAGCCGCGCTCTCGCGCCGTCTCGATGTCACCATGGCGAATG
ATGCCTCACTCCTGCTCGTCGAAACACTCGTGCTTGGTCGTCTGGCGCATGGTGAGAGTGCGATTAGCTGTGATTTTCGC
GATTCCTGGCGTATCCGTCGCGGCGGGCGTTTGGTCTTTGCCGAGGAAAGCCGGATCGAGGGACCCTTGAACAGGACATT
CGACCAGCCGAGCCTGGGGCATGGGAGGCGGGCCATGGCATTCCTTCTCGCCGTTGCGCCTGACGCAGAGGCGAGGCTTG
AATCCTTGCGGGCACGCCTTGCGCCGTTCGAACCCGCTTGCCCGCATGGTGTCTCCGCCTGGAATGGTATGCTGGTCGCG
CGTCTCATGGCGGCTTCGCCCGAGGTCTTGCGGTGTGCGCTTCTGGCGGGCCTTGGCCTTTGGCGCGATGATATCGCGCG
CCTCTGGTTATAA

Upstream 100 bases:

>100_bases
TCCCTGCCGGATGAATGGAATTAGAGCCTCATTCGCATGGCAATGCGAAGGCTGGCTTCGCCGCATTGGTGGATCGTGAG
CAACTGAGAAGCTTCCTCGC

Downstream 100 bases:

>100_bases
TACCCAGTCTTAATAAGTGAGACTCAGACTTAGCCCCCGCGACGGCGGGGCGGCGGCTTTCCGCCGAACCTCCTACATCT
CGACAGGTCGAGATGTCGAA

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTMSFAANRARGEIRVRYEKHGGITRPLRLFETGGLRLRHPRAFQGCVGMIVNSAGGIAGGDHLRLAIEAEEQSELVIAT
PAAEKIYRARDKAAMLDLSLVLAPETKLAFLPQETILFDGAALSRRLDVTMANDASLLLVETLVLGRLAHGESAISCDFR
DSWRIRRGGRLVFAEESRIEGPLNRTFDQPSLGHGRRAMAFLLAVAPDAEARLESLRARLAPFEPACPHGVSAWNGMLVA
RLMAASPEVLRCALLAGLGLWRDDIARLWL

Sequences:

>Translated_270_residues
MTMSFAANRARGEIRVRYEKHGGITRPLRLFETGGLRLRHPRAFQGCVGMIVNSAGGIAGGDHLRLAIEAEEQSELVIAT
PAAEKIYRARDKAAMLDLSLVLAPETKLAFLPQETILFDGAALSRRLDVTMANDASLLLVETLVLGRLAHGESAISCDFR
DSWRIRRGGRLVFAEESRIEGPLNRTFDQPSLGHGRRAMAFLLAVAPDAEARLESLRARLAPFEPACPHGVSAWNGMLVA
RLMAASPEVLRCALLAGLGLWRDDIARLWL
>Mature_269_residues
TMSFAANRARGEIRVRYEKHGGITRPLRLFETGGLRLRHPRAFQGCVGMIVNSAGGIAGGDHLRLAIEAEEQSELVIATP
AAEKIYRARDKAAMLDLSLVLAPETKLAFLPQETILFDGAALSRRLDVTMANDASLLLVETLVLGRLAHGESAISCDFRD
SWRIRRGGRLVFAEESRIEGPLNRTFDQPSLGHGRRAMAFLLAVAPDAEARLESLRARLAPFEPACPHGVSAWNGMLVAR
LMAASPEVLRCALLAGLGLWRDDIARLWL

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_BEII9 (B2IDT5)

Other databases:

- EMBL:   CP001016
- RefSeq:   YP_001834356.1
- GeneID:   6200929
- GenomeReviews:   CP001016_GR
- KEGG:   bid:Bind_3308
- HOGENOM:   HBG711156
- OMA:   QETILFD
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 29557; Mature: 29426

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSFAANRARGEIRVRYEKHGGITRPLRLFETGGLRLRHPRAFQGCVGMIVNSAGGIAG
CCCCCCCCCCCCEEEEEEECCCCCCCCHHEEECCCEEEECCHHHHHHHHHHHHCCCCCCC
GDHLRLAIEAEEQSELVIATPAAEKIYRARDKAAMLDLSLVLAPETKLAFLPQETILFDG
CCEEEEEEEECCCCCEEEECCCHHHHHHHHCHHHEEEEEEEEECCCEEEECCCHHEEECC
AALSRRLDVTMANDASLLLVETLVLGRLAHGESAISCDFRDSWRIRRGGRLVFAEESRIE
HHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCEEEEECCCCCC
GPLNRTFDQPSLGHGRRAMAFLLAVAPDAEARLESLRARLAPFEPACPHGVSAWNGMLVA
CCHHCCCCCCCCCCCHHHHEEHEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RLMAASPEVLRCALLAGLGLWRDDIARLWL
HHHHCCHHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
TMSFAANRARGEIRVRYEKHGGITRPLRLFETGGLRLRHPRAFQGCVGMIVNSAGGIAG
CCCCCCCCCCCEEEEEEECCCCCCCCHHEEECCCEEEECCHHHHHHHHHHHHCCCCCCC
GDHLRLAIEAEEQSELVIATPAAEKIYRARDKAAMLDLSLVLAPETKLAFLPQETILFDG
CCEEEEEEEECCCCCEEEECCCHHHHHHHHCHHHEEEEEEEEECCCEEEECCCHHEEECC
AALSRRLDVTMANDASLLLVETLVLGRLAHGESAISCDFRDSWRIRRGGRLVFAEESRIE
HHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCEEEEECCCCCC
GPLNRTFDQPSLGHGRRAMAFLLAVAPDAEARLESLRARLAPFEPACPHGVSAWNGMLVA
CCHHCCCCCCCCCCCHHHHEEHEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RLMAASPEVLRCALLAGLGLWRDDIARLWL
HHHHCCHHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA