| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680207
Identifier: 182680207
GI number: 182680207
Start: 3761372
End: 3763564
Strand: Reverse
Name: 182680207
Synonym: Bind_3305
Alternate gene names: NA
Gene position: 3763564-3761372 (Counterclockwise)
Preceding gene: 182680209
Following gene: 182680205
Centisome position: 90.25
GC content: 52.99
Gene sequence:
>2193_bases ATGCTGATTTCAGGGGTCGCAAAAGTGGGTCGGGTCGAGCGTAAATCTATTGTTTTCATAATGTTGGGATTTGGTGCGGA AGCGGTGGGTTTTGGGCTTTTGGCTCCAAGAGCCTTTGCTCAGGAGCAATTGCCGACCATCGACGTCGTCGCGGAAGGTC CCACTCTCCCCTCAGCGTCAGAAATTCTTATCCGCGACACCCAGAGAATGGATCGTGCCCGCGATAATCTTTCGCCGCGC GGCGGTGCTACGGCCTATGATCTCGGGCGTCAGGCTATCGAGGGGTTGCCTCAGGGCGATAATGCATCGCTTGACAAAAT TGTCCTGCAAATGCCGGGTGTGACGCAGGATTCCGTCGCCAGCGGCGATTTTCATATCCGCAATGAACACGCCAATGTGC AATATCGGATCAATGGCGTTTTGTTGCCGGATGGTGTTTCAGGTTTTGGGCAGATCCTCGATCCGGCCTTTATCGGTAAT CTCGCCTTGATCGATGGCGTGCTGCCCTCCCGTTACGGGCTGCGGACCTCTGGTATTCTCGATATCACGACACGCAGTGG TGTTTTTGACAATGGGGGCGATGTTAGCCTCTATGGTGGCAGCTATAGTTCGATCATGCCGCGCCTGAGCTATGGCGGTA CGAGTGGCAAGACACAATATTTTGCCGTTGGCCGTTTCTTTTCGAATGGGCTCGGTATGGAGAATCTCACAATCGGCCAC CAAGCGTTCCATGATGCAAGTCAGCAGGGGCGTTTCTTCGGCTATGCCTCGACCATGCTGGATGATGCGACACGCTTGAG CGTCATCACCGGCTTCTCGATCAACCGCTATCAGATCCCCAATAATCCTGGTCAATCACCGCAATTCACGGTCTTTGGTA TCAATGATTTCAATTCCTTGAATATCAATGAAAATCAGGTCGAACGCAGCTTTTATAATGTGCTTGCGTGGCAGCGCAGT GTTGGCGACATCGATGCGCAAGTCGCTTATTTTTCACGCTATAGTTCCGTGCATTATATCCCTGATCAGCTTGGCGATCT CTTGTTCAATGGTGTGGCTTCCAATGTCTTTCGCGACAGCCTGTTGAATGGCGTGCAGGGCGATGCCGCCCTTCATGCAG GGCCGAATACGGTCCGTTTCGGCTTTCAGGTCAGCGCCGAATATACACGCGCTATCAATTCCAATACAGTGTTGCCTCTT GATGGAGATGGGAATGCGATTGATGCACCCTTCACTTTGGGCGAGGCCGTGCCGAAAACAGGTTTTCTTGGTTCTGTCTA CGCGGAGGATGAATGGCGGATCAATGATCAGCTCACGCTCAACGCGGGTCTTCGCTTCGATCAGATGAATCAATATGTTT CCGCCAATCAGTTGAGCCCGCGTTTCAGCCTGGTCTATGTGCCTATGGAGGGAACCGCCTTTCATATAGGCTACGCCCGT TATTTCACGCCGCCATCACAAAGCCTTTCGGCTCCGGTCGATCAGGCGATCTATGCCAACACGACCTTGCAACCGGAAGT GACCACGCAAAGTCCGGTGCGGCCGGAACGGTCACATTATTTCGATGCGGGGGTGACACAGCAATTAACGCCGCAATTGT CGACCGGCATCGATGTCTATTACAAGAATGCCCGTAACCTGCTCGATGATGGCCAATTCGGCCAGGCCTATGTCCTGACG ACCTTCAATTACGATCGCGCTTATAATACGGGGGTCGAGTTCAAGGCCAATTATCAGGATGAAAACCTGCGTGCCTATGC CAATTTCGCCTGGGCGCGGCAGCGGGCGACACAAGTCTCGTCGAACCAATATCTCTTCGGCGCCGATGAACTCGCCTATA TTGATTCCCATTATATTTATACCGATCATGCCCAGAAAATCTCAGCCTCGGCGGGTTTTTCCTATCTCTGGCAGGGGACG CGGTTCGGCGTCGATCTGATCTATGGCAGCGGCTTGCGTTCGGGTTTCGCGAATACGGAAAGTCTGTCACCTTATGCGCA GGTCAATCTCGGCCTGTCGCATGATTTCAAGCTTTCGGATGCGGGCAAGGGACAGCCTTTGACGGTGCGCTTCGATATCA TCAATCTGTTTGACCACGGCTATGCCATTCGCGACGGATCCGGCATCGGTGTCTTCGCGCCGCAATATGCACAGCGCCGC AGTTTCTACGCGGGACTTTCTTATAAGTTTTAA
Upstream 100 bases:
>100_bases GGGAATTGAGCGCGAAGTCGCCGTGCCCGGTTGGACCTCTCCTGATGTTTTCGTCCAGATGGCCTTGTTCCCCCAATATT AATGTTATAACGTAACAATA
Downstream 100 bases:
>100_bases TGTCGGTCGCCGAGCGCAAGGTGTTTGGCGCCATTTCCGGACCTTGGATGATCAGCCCTTAATTTCTCAAGTTGGCCGCT TTCGACCCTGAAGAACGTAT
Product: outer membrane insertion C-terminal signal
Products: NA
Alternate protein names: Nb-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; NB-Dependent Outer Membrane Receptor; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Receptor For Iron Transport; Outer Membrane Colicin I Receptor; Nb-Dependent Receptor; NB Potential Colicin Receptor; Colicin I Receptor; NB-Dependent Siderophore Receptor; Ferrichrome-Iron Receptor
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MLISGVAKVGRVERKSIVFIMLGFGAEAVGFGLLAPRAFAQEQLPTIDVVAEGPTLPSASEILIRDTQRMDRARDNLSPR GGATAYDLGRQAIEGLPQGDNASLDKIVLQMPGVTQDSVASGDFHIRNEHANVQYRINGVLLPDGVSGFGQILDPAFIGN LALIDGVLPSRYGLRTSGILDITTRSGVFDNGGDVSLYGGSYSSIMPRLSYGGTSGKTQYFAVGRFFSNGLGMENLTIGH QAFHDASQQGRFFGYASTMLDDATRLSVITGFSINRYQIPNNPGQSPQFTVFGINDFNSLNINENQVERSFYNVLAWQRS VGDIDAQVAYFSRYSSVHYIPDQLGDLLFNGVASNVFRDSLLNGVQGDAALHAGPNTVRFGFQVSAEYTRAINSNTVLPL DGDGNAIDAPFTLGEAVPKTGFLGSVYAEDEWRINDQLTLNAGLRFDQMNQYVSANQLSPRFSLVYVPMEGTAFHIGYAR YFTPPSQSLSAPVDQAIYANTTLQPEVTTQSPVRPERSHYFDAGVTQQLTPQLSTGIDVYYKNARNLLDDGQFGQAYVLT TFNYDRAYNTGVEFKANYQDENLRAYANFAWARQRATQVSSNQYLFGADELAYIDSHYIYTDHAQKISASAGFSYLWQGT RFGVDLIYGSGLRSGFANTESLSPYAQVNLGLSHDFKLSDAGKGQPLTVRFDIINLFDHGYAIRDGSGIGVFAPQYAQRR SFYAGLSYKF
Sequences:
>Translated_730_residues MLISGVAKVGRVERKSIVFIMLGFGAEAVGFGLLAPRAFAQEQLPTIDVVAEGPTLPSASEILIRDTQRMDRARDNLSPR GGATAYDLGRQAIEGLPQGDNASLDKIVLQMPGVTQDSVASGDFHIRNEHANVQYRINGVLLPDGVSGFGQILDPAFIGN LALIDGVLPSRYGLRTSGILDITTRSGVFDNGGDVSLYGGSYSSIMPRLSYGGTSGKTQYFAVGRFFSNGLGMENLTIGH QAFHDASQQGRFFGYASTMLDDATRLSVITGFSINRYQIPNNPGQSPQFTVFGINDFNSLNINENQVERSFYNVLAWQRS VGDIDAQVAYFSRYSSVHYIPDQLGDLLFNGVASNVFRDSLLNGVQGDAALHAGPNTVRFGFQVSAEYTRAINSNTVLPL DGDGNAIDAPFTLGEAVPKTGFLGSVYAEDEWRINDQLTLNAGLRFDQMNQYVSANQLSPRFSLVYVPMEGTAFHIGYAR YFTPPSQSLSAPVDQAIYANTTLQPEVTTQSPVRPERSHYFDAGVTQQLTPQLSTGIDVYYKNARNLLDDGQFGQAYVLT TFNYDRAYNTGVEFKANYQDENLRAYANFAWARQRATQVSSNQYLFGADELAYIDSHYIYTDHAQKISASAGFSYLWQGT RFGVDLIYGSGLRSGFANTESLSPYAQVNLGLSHDFKLSDAGKGQPLTVRFDIINLFDHGYAIRDGSGIGVFAPQYAQRR SFYAGLSYKF >Mature_730_residues MLISGVAKVGRVERKSIVFIMLGFGAEAVGFGLLAPRAFAQEQLPTIDVVAEGPTLPSASEILIRDTQRMDRARDNLSPR GGATAYDLGRQAIEGLPQGDNASLDKIVLQMPGVTQDSVASGDFHIRNEHANVQYRINGVLLPDGVSGFGQILDPAFIGN LALIDGVLPSRYGLRTSGILDITTRSGVFDNGGDVSLYGGSYSSIMPRLSYGGTSGKTQYFAVGRFFSNGLGMENLTIGH QAFHDASQQGRFFGYASTMLDDATRLSVITGFSINRYQIPNNPGQSPQFTVFGINDFNSLNINENQVERSFYNVLAWQRS VGDIDAQVAYFSRYSSVHYIPDQLGDLLFNGVASNVFRDSLLNGVQGDAALHAGPNTVRFGFQVSAEYTRAINSNTVLPL DGDGNAIDAPFTLGEAVPKTGFLGSVYAEDEWRINDQLTLNAGLRFDQMNQYVSANQLSPRFSLVYVPMEGTAFHIGYAR YFTPPSQSLSAPVDQAIYANTTLQPEVTTQSPVRPERSHYFDAGVTQQLTPQLSTGIDVYYKNARNLLDDGQFGQAYVLT TFNYDRAYNTGVEFKANYQDENLRAYANFAWARQRATQVSSNQYLFGADELAYIDSHYIYTDHAQKISASAGFSYLWQGT RFGVDLIYGSGLRSGFANTESLSPYAQVNLGLSHDFKLSDAGKGQPLTVRFDIINLFDHGYAIRDGSGIGVFAPQYAQRR SFYAGLSYKF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79961; Mature: 79961
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISGVAKVGRVERKSIVFIMLGFGAEAVGFGLLAPRAFAQEQLPTIDVVAEGPTLPSAS CCCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCC EILIRDTQRMDRARDNLSPRGGATAYDLGRQAIEGLPQGDNASLDKIVLQMPGVTQDSVA HHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCC SGDFHIRNEHANVQYRINGVLLPDGVSGFGQILDPAFIGNLALIDGVLPSRYGLRTSGIL CCCEEEEECCCCEEEEEEEEECCCCCCHHHHHCCHHHHCCCHHHHCCCCCCCCCCCCCEE DITTRSGVFDNGGDVSLYGGSYSSIMPRLSYGGTSGKTQYFAVGRFFSNGLGMENLTIGH EEEECCCCCCCCCCEEEECCCHHHHCCHHCCCCCCCCEEEEEEEHHHHCCCCCCEEEECH QAFHDASQQGRFFGYASTMLDDATRLSVITGFSINRYQIPNNPGQSPQFTVFGINDFNSL HHHHHHHHCCCEEEEHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCC NINENQVERSFYNVLAWQRSVGDIDAQVAYFSRYSSVHYIPDQLGDLLFNGVASNVFRDS CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH LLNGVQGDAALHAGPNTVRFGFQVSAEYTRAINSNTVLPLDGDGNAIDAPFTLGEAVPKT HHCCCCCCEEEECCCCEEEEEEEECCHHHHHCCCCEEEEECCCCCEECCCEECCCCCCCC GFLGSVYAEDEWRINDQLTLNAGLRFDQMNQYVSANQLSPRFSLVYVPMEGTAFHIGYAR CCCEEEEECCCEEECCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEE YFTPPSQSLSAPVDQAIYANTTLQPEVTTQSPVRPERSHYFDAGVTQQLTPQLSTGIDVY EECCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCHHCEECCCCCHHCCCHHHCCEEEE YKNARNLLDDGQFGQAYVLTTFNYDRAYNTGVEFKANYQDENLRAYANFAWARQRATQVS ECCHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHCC SNQYLFGADELAYIDSHYIYTDHAQKISASAGFSYLWQGTRFGVDLIYGSGLRSGFANTE CCCEEECCCCEEEEECEEEEECCHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCC SLSPYAQVNLGLSHDFKLSDAGKGQPLTVRFDIINLFDHGYAIRDGSGIGVFAPQYAQRR CCCCEEEEEECCCCCEEECCCCCCCEEEEEEEEEEECCCCEEEECCCCCEEECCHHHHHH SFYAGLSYKF HHCCCCEECC >Mature Secondary Structure MLISGVAKVGRVERKSIVFIMLGFGAEAVGFGLLAPRAFAQEQLPTIDVVAEGPTLPSAS CCCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCC EILIRDTQRMDRARDNLSPRGGATAYDLGRQAIEGLPQGDNASLDKIVLQMPGVTQDSVA HHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCC SGDFHIRNEHANVQYRINGVLLPDGVSGFGQILDPAFIGNLALIDGVLPSRYGLRTSGIL CCCEEEEECCCCEEEEEEEEECCCCCCHHHHHCCHHHHCCCHHHHCCCCCCCCCCCCCEE DITTRSGVFDNGGDVSLYGGSYSSIMPRLSYGGTSGKTQYFAVGRFFSNGLGMENLTIGH EEEECCCCCCCCCCEEEECCCHHHHCCHHCCCCCCCCEEEEEEEHHHHCCCCCCEEEECH QAFHDASQQGRFFGYASTMLDDATRLSVITGFSINRYQIPNNPGQSPQFTVFGINDFNSL HHHHHHHHCCCEEEEHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCC NINENQVERSFYNVLAWQRSVGDIDAQVAYFSRYSSVHYIPDQLGDLLFNGVASNVFRDS CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH LLNGVQGDAALHAGPNTVRFGFQVSAEYTRAINSNTVLPLDGDGNAIDAPFTLGEAVPKT HHCCCCCCEEEECCCCEEEEEEEECCHHHHHCCCCEEEEECCCCCEECCCEECCCCCCCC GFLGSVYAEDEWRINDQLTLNAGLRFDQMNQYVSANQLSPRFSLVYVPMEGTAFHIGYAR CCCEEEEECCCEEECCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEE YFTPPSQSLSAPVDQAIYANTTLQPEVTTQSPVRPERSHYFDAGVTQQLTPQLSTGIDVY EECCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCHHCEECCCCCHHCCCHHHCCEEEE YKNARNLLDDGQFGQAYVLTTFNYDRAYNTGVEFKANYQDENLRAYANFAWARQRATQVS ECCHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHCC SNQYLFGADELAYIDSHYIYTDHAQKISASAGFSYLWQGTRFGVDLIYGSGLRSGFANTE CCCEEECCCCEEEEECEEEEECCHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCC SLSPYAQVNLGLSHDFKLSDAGKGQPLTVRFDIINLFDHGYAIRDGSGIGVFAPQYAQRR CCCCEEEEEECCCCCEEECCCCCCCEEEEEEEEEEECCCCEEEECCCCCEEECCHHHHHH SFYAGLSYKF HHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA