| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is chvI [H]
Identifier: 182680204
GI number: 182680204
Start: 3758700
End: 3759392
Strand: Reverse
Name: chvI [H]
Synonym: Bind_3302
Alternate gene names: 182680204
Gene position: 3759392-3758700 (Counterclockwise)
Preceding gene: 182680205
Following gene: 182680203
Centisome position: 90.15
GC content: 55.12
Gene sequence:
>693_bases ATGGCCGCCACCATTCTTGTTGTCGATGACGACCCGCATATTCGCGAGGTTATCTGTTTCGCCCTGGAAAAAGCAGGAAT GCGCGTCGTTGTTGCTGAAGATGGATCGCAAGTGCTCACTATCATGGCTGCGCAAACGCCGGATCTGATTGTGCTCGATA TAGGCATGCCGGAAATGGACGGGCTTGAAACCTGCCGCCGTATCCGGAAGACGAGCGAAGTACCGATCCTGTTTCTGTCA GCTCGCGACGAAGAAATCGACCGTGTACTCGGTCTCGAAATCGGCGGCGATGATTACGTCACCAAGCCTTTCAGTCCGCG TGAACTCGTTGCTCGGGTCAATGTCATTCTGAAACGTCTTCGGCCGAAAGAGGCAGAGCCTTCGAATGGCTTGACGCATG GAGAGCTTTCGCTCGATCTCGCCAGCCATCGCGCCACGTTCCACGGGAGTGCCCTTTCCCTGACTGCTCTCGAATTCTCC ATTCTCGAATGCTTCACCGCGCGGCCCAATCAGGTTTTCACACGGGAACAGATTTTGGCTTCTGCCTATAACAACGCGAT AAACGTTTCCGACCGCACGATTGACAGCCATATCCGCAACATTCGCGCGAAGCTCGCTCTGGCTGGCGGCGGAGGATGTA TCGAAACCGTGCATGGAATAGGATTCCGGCTCGGCCCTTGCCAAGCATCATGA
Upstream 100 bases:
>100_bases TGGCGAGCATGGGGTTTTGCAACGTGGCGTCTTGGACGATATTTGGCTAGTTCTGAGCACATGGTCACTCCCGCCATCCC CGAGCAACCCTGAGACCAAC
Downstream 100 bases:
>100_bases AATCGATGCTGAAATCTCCAGCGATGATGGGCAAATGGCGTCCACCGCTCGCTTTGGTCGTGACCTGTCTTCTATGTTTT GCTGTGGCCTTGCCACTGGG
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAATILVVDDDPHIREVICFALEKAGMRVVVAEDGSQVLTIMAAQTPDLIVLDIGMPEMDGLETCRRIRKTSEVPILFLS ARDEEIDRVLGLEIGGDDYVTKPFSPRELVARVNVILKRLRPKEAEPSNGLTHGELSLDLASHRATFHGSALSLTALEFS ILECFTARPNQVFTREQILASAYNNAINVSDRTIDSHIRNIRAKLALAGGGGCIETVHGIGFRLGPCQAS
Sequences:
>Translated_230_residues MAATILVVDDDPHIREVICFALEKAGMRVVVAEDGSQVLTIMAAQTPDLIVLDIGMPEMDGLETCRRIRKTSEVPILFLS ARDEEIDRVLGLEIGGDDYVTKPFSPRELVARVNVILKRLRPKEAEPSNGLTHGELSLDLASHRATFHGSALSLTALEFS ILECFTARPNQVFTREQILASAYNNAINVSDRTIDSHIRNIRAKLALAGGGGCIETVHGIGFRLGPCQAS >Mature_229_residues AATILVVDDDPHIREVICFALEKAGMRVVVAEDGSQVLTIMAAQTPDLIVLDIGMPEMDGLETCRRIRKTSEVPILFLSA RDEEIDRVLGLEIGGDDYVTKPFSPRELVARVNVILKRLRPKEAEPSNGLTHGELSLDLASHRATFHGSALSLTALEFSI LECFTARPNQVFTREQILASAYNNAINVSDRTIDSHIRNIRAKLALAGGGGCIETVHGIGFRLGPCQAS
Specific function: Member of a two-component regulatory system ChvG/ChvI [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=42.9864253393665, Blast_Score=186, Evalue=1e-48, Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=40.5286343612335, Blast_Score=180, Evalue=7e-47, Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=39.4618834080717, Blast_Score=174, Evalue=6e-45, Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=37.0535714285714, Blast_Score=138, Evalue=2e-34, Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=32.3144104803493, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=35.1351351351351, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=33.9130434782609, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=32.7586206896552, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=35.7142857142857, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=32.1266968325792, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=30.8035714285714, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=32.1100917431193, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=33.4821428571429, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=29.1845493562232, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1790299, Length=126, Percent_Identity=34.9206349206349, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=34.4827586206897, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1787487, Length=100, Percent_Identity=34, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788191, Length=120, Percent_Identity=32.5, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25045; Mature: 24914
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATILVVDDDPHIREVICFALEKAGMRVVVAEDGSQVLTIMAAQTPDLIVLDIGMPEMD CCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCEEEEECCCCCCC GLETCRRIRKTSEVPILFLSARDEEIDRVLGLEIGGDDYVTKPFSPRELVARVNVILKRL HHHHHHHHHCCCCCCEEEEECCCHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC RPKEAEPSNGLTHGELSLDLASHRATFHGSALSLTALEFSILECFTARPNQVFTREQILA CCCCCCCCCCCCCCEEEEEEHHCCCEECCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH SAYNNAINVSDRTIDSHIRNIRAKLALAGGGGCIETVHGIGFRLGPCQAS HHHCCEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHCCEECCCCCCC >Mature Secondary Structure AATILVVDDDPHIREVICFALEKAGMRVVVAEDGSQVLTIMAAQTPDLIVLDIGMPEMD CEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCEEEEECCCCCCC GLETCRRIRKTSEVPILFLSARDEEIDRVLGLEIGGDDYVTKPFSPRELVARVNVILKRL HHHHHHHHHCCCCCCEEEEECCCHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC RPKEAEPSNGLTHGELSLDLASHRATFHGSALSLTALEFSILECFTARPNQVFTREQILA CCCCCCCCCCCCCCEEEEEEHHCCCEECCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH SAYNNAINVSDRTIDSHIRNIRAKLALAGGGGCIETVHGIGFRLGPCQAS HHHCCEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407839 [H]