| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ydhS [C]
Identifier: 182680180
GI number: 182680180
Start: 3728770
End: 3730101
Strand: Reverse
Name: ydhS [C]
Synonym: Bind_3277
Alternate gene names: 182680180
Gene position: 3730101-3728770 (Counterclockwise)
Preceding gene: 182680182
Following gene: 182680179
Centisome position: 89.45
GC content: 57.88
Gene sequence:
>1332_bases ATGTCGCATGAAAAAAGGATCGCCATCGTTGGAGGCGGTGCGAGTGGTGCCCTCCTTGCCTATCAGCTGACGCAGAAAGC CATTGGTGCACGCGTCATTGTCATCGATCCTTCTCCGACACCGGCGCTCGGGCTTGCTTATTCGACGCCGAGTTCGCGAC ATTTGCTGAATGTCACCGCCGGTGGCATGAGCGCCTTGCCGGACCAGCCGGAGCACTTCCTGAACTGGCTGTGTGCAAAC CATAATCCCCAAGCAACGGCGATGACCTTCGCGCCGCGTATTGTCTTTGGACATTATCTTCAATCGCTTTATGCGCTGTC CTCGGCTGAACATTTGCGGGCACAGGTGCACCATTACAAACCAGCTCCCGTTGGTGGTTCTCTTGTGCTTGGCAATGGGC AAGTGCTTGCGGCTGATCTTGTCATTCTCGCGACGGGCAATTTCGATCCCGCGCCTTTGCCCGCTATGGATGAGATCGCT AAAAATTCAGGATTTTATCACCATAATGCCTGGGATAGAGCGACATTCGAAGGGCTTGATCCTGATGAGCCGATTGCTTT GATCGGTACAGGCCTCACGGCTGTGGACGTCGTGCTGCGGCTCCGTGAGCTGGGGCATCGTGCCGTGATAACGACCATCT CCCGTCATGGGCTCTTCCCCAATCGTCATGAGACCTATGAGAAGCTCGATCATTGCGCCCTGCCGGACGAGGTCCCCGCC AGTGCCTTGGCCTATTTCCGAGCTTTTCGGCGGGCGCTTCGCAGCGGTCTGCCGTGGCGCTCGGTCGTTGACAGTTTGCG GGCCAGGACGAATGCTTTGTGGCTGGCTTTGCCCTTGATCGAGCAGAAGCGCTTTCGCCGTCATCTTCAGCGGCGTTGGG ATATCGTCCGCCACCGCATGGCGCCCTCGATCGCTGATATCATTGAGGCCGAGCGCGCTGACGGAACACTGCTCGTGTGC CATGGCCACGTGCATGGCATCTCGCTGAGCAATGGCCGCGGTGAGGTTGTCATCAAGAAGGGCGCATCGACACAAAACCT GCCGGCCGCCCGTGTGATCAATTGCACCGGCTCCGATCTCAATTATCGCCGTGTCGCTTCCTCCTTGCTGAACGGCTTGC TCGAGCAAGGTATGATTATTGCGGGTCCCCTGGGCAATGGGCTGAAAATTGATGGCAGTGGTGCCGTTTACGGTCGAGAA GGAAGAATTTCCGACACTTTGTTTACGCTCGGTCCGGCGCGGCTAGGAACCTTGTTCGAGTCCATCGCTATCCCCGAAAT CCGGCAACAGGCGGCGGATCTCGCCGCGCATCTTGCGGAACGGGTGCGATAG
Upstream 100 bases:
>100_bases CATCAAAAGGCTGGCTTCATGAATCGTGGATTGTCGGGCCGCCGCGAAGGGAAGTGAGACAGTCTTGCGATCCTGATCAT GGGGAACAGCGGACCAGATG
Downstream 100 bases:
>100_bases CTTTTTGGATGCGGTGGATTTCAGAGGAAGCTCTTTGAAGCCGGCGTGCGCTTTTCATCCCAGGCGCGCCTATTTTATTG TCTTGTCGTCAAATGGGTGA
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Hydroxyacylglutathione Hydrolase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Beta-Lactamase Domain-Containing Protein; FAD-Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSHEKRIAIVGGGASGALLAYQLTQKAIGARVIVIDPSPTPALGLAYSTPSSRHLLNVTAGGMSALPDQPEHFLNWLCAN HNPQATAMTFAPRIVFGHYLQSLYALSSAEHLRAQVHHYKPAPVGGSLVLGNGQVLAADLVILATGNFDPAPLPAMDEIA KNSGFYHHNAWDRATFEGLDPDEPIALIGTGLTAVDVVLRLRELGHRAVITTISRHGLFPNRHETYEKLDHCALPDEVPA SALAYFRAFRRALRSGLPWRSVVDSLRARTNALWLALPLIEQKRFRRHLQRRWDIVRHRMAPSIADIIEAERADGTLLVC HGHVHGISLSNGRGEVVIKKGASTQNLPAARVINCTGSDLNYRRVASSLLNGLLEQGMIIAGPLGNGLKIDGSGAVYGRE GRISDTLFTLGPARLGTLFESIAIPEIRQQAADLAAHLAERVR
Sequences:
>Translated_443_residues MSHEKRIAIVGGGASGALLAYQLTQKAIGARVIVIDPSPTPALGLAYSTPSSRHLLNVTAGGMSALPDQPEHFLNWLCAN HNPQATAMTFAPRIVFGHYLQSLYALSSAEHLRAQVHHYKPAPVGGSLVLGNGQVLAADLVILATGNFDPAPLPAMDEIA KNSGFYHHNAWDRATFEGLDPDEPIALIGTGLTAVDVVLRLRELGHRAVITTISRHGLFPNRHETYEKLDHCALPDEVPA SALAYFRAFRRALRSGLPWRSVVDSLRARTNALWLALPLIEQKRFRRHLQRRWDIVRHRMAPSIADIIEAERADGTLLVC HGHVHGISLSNGRGEVVIKKGASTQNLPAARVINCTGSDLNYRRVASSLLNGLLEQGMIIAGPLGNGLKIDGSGAVYGRE GRISDTLFTLGPARLGTLFESIAIPEIRQQAADLAAHLAERVR >Mature_442_residues SHEKRIAIVGGGASGALLAYQLTQKAIGARVIVIDPSPTPALGLAYSTPSSRHLLNVTAGGMSALPDQPEHFLNWLCANH NPQATAMTFAPRIVFGHYLQSLYALSSAEHLRAQVHHYKPAPVGGSLVLGNGQVLAADLVILATGNFDPAPLPAMDEIAK NSGFYHHNAWDRATFEGLDPDEPIALIGTGLTAVDVVLRLRELGHRAVITTISRHGLFPNRHETYEKLDHCALPDEVPAS ALAYFRAFRRALRSGLPWRSVVDSLRARTNALWLALPLIEQKRFRRHLQRRWDIVRHRMAPSIADIIEAERADGTLLVCH GHVHGISLSNGRGEVVIKKGASTQNLPAARVINCTGSDLNYRRVASSLLNGLLEQGMIIAGPLGNGLKIDGSGAVYGREG RISDTLFTLGPARLGTLFESIAIPEIRQQAADLAAHLAERVR
Specific function: Unknown
COG id: COG4529
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47990; Mature: 47858
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHEKRIAIVGGGASGALLAYQLTQKAIGARVIVIDPSPTPALGLAYSTPSSRHLLNVTA CCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEEEEC GGMSALPDQPEHFLNWLCANHNPQATAMTFAPRIVFGHYLQSLYALSSAEHLRAQVHHYK CCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAPVGGSLVLGNGQVLAADLVILATGNFDPAPLPAMDEIAKNSGFYHHNAWDRATFEGLD CCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCC PDEPIALIGTGLTAVDVVLRLRELGHRAVITTISRHGLFPNRHETYEKLDHCALPDEVPA CCCCEEEEECCHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCHHHHHHHHHCCCCCCCCH SALAYFRAFRRALRSGLPWRSVVDSLRARTNALWLALPLIEQKRFRRHLQRRWDIVRHRM HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH APSIADIIEAERADGTLLVCHGHVHGISLSNGRGEVVIKKGASTQNLPAARVINCTGSDL CCHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCC NYRRVASSLLNGLLEQGMIIAGPLGNGLKIDGSGAVYGREGRISDTLFTLGPARLGTLFE HHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCEECCCCCCCCHHEECCHHHHHHHHH SIAIPEIRQQAADLAAHLAERVR HHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHEKRIAIVGGGASGALLAYQLTQKAIGARVIVIDPSPTPALGLAYSTPSSRHLLNVTA CCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEEEEC GGMSALPDQPEHFLNWLCANHNPQATAMTFAPRIVFGHYLQSLYALSSAEHLRAQVHHYK CCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAPVGGSLVLGNGQVLAADLVILATGNFDPAPLPAMDEIAKNSGFYHHNAWDRATFEGLD CCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCC PDEPIALIGTGLTAVDVVLRLRELGHRAVITTISRHGLFPNRHETYEKLDHCALPDEVPA CCCCEEEEECCHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCHHHHHHHHHCCCCCCCCH SALAYFRAFRRALRSGLPWRSVVDSLRARTNALWLALPLIEQKRFRRHLQRRWDIVRHRM HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH APSIADIIEAERADGTLLVCHGHVHGISLSNGRGEVVIKKGASTQNLPAARVINCTGSDL CCHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCC NYRRVASSLLNGLLEQGMIIAGPLGNGLKIDGSGAVYGREGRISDTLFTLGPARLGTLFE HHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCEECCCCCCCCHHEECCHHHHHHHHH SIAIPEIRQQAADLAAHLAERVR HHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA