Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is ytfP [H]

Identifier: 182680151

GI number: 182680151

Start: 3692712

End: 3693920

Strand: Reverse

Name: ytfP [H]

Synonym: Bind_3248

Alternate gene names: 182680151

Gene position: 3693920-3692712 (Counterclockwise)

Preceding gene: 182680152

Following gene: 182680149

Centisome position: 88.58

GC content: 60.79

Gene sequence:

>1209_bases
ATGGCGGCCGAGACCGTCGCGCGGCAGATGAGTGGCACGGGCGTGAAAGTCACCGTTTATGATCGCATGCCGGCAGTCGG
GCGCAAATTCCTCCTGGCGGGTCGCGGCGGTCTCAACCTGACCCATAGTGAAGCGCTGGACATTTTGCTGACCCGTTATG
GTTCGGCCATGCCGGATCTTGCCTCAGCCATCCGGGCTTTTCCGCCGCAGGCGTTGCGGGATTGGTGTGAGGGTCTCGGA
CAAGAGACTTTCGTCGGCTCCAGCGGGCGCATCTTTCCAAAATCGTTCAAGGCTTCTCCCTTGCTGCGGGCCTGGCTCGG
ACGGCTGCGTTATTTAGGGGTTCAATTCGCTCTGCGGCATGAATGGCGCGGTTTTGAAAAAGAAAACGCGCTTATTTTCG
CAACGCCCGAGGGGCTATTCCGCGTTGAGGCGCAAGCCTGTGTCCTGGCGCTCGGCGGAGCGAGCTGGCCCCGGCTTGGC
TCGGATGGCGCCTGGGTGCCGGTTCTGGAAAAAGCGGGTCTTGCCGTCGTTCCCTTGCAGCCAGCCAATTGCGGCTTTCT
TGTCCCCTGGTCGGAGCATTTTCTCGCCCGTTTCGAAGGGGCGCCTTTGAAAAATCTGCGTCTGTCTTGCCGCGATCATT
TGGGGGTGGAGCAGGCAAGTCTGGGCGAAGTGACAATCACGCATACAGGTCTCGAAGGCGGTGGCCTGTATGCGCTCGGG
CGTTTCTTGCGCGAAGATTTTTTGAACAATGGCGAGGCCTGGCTGACCCTGAGCTTGCGGCCTGATTTGACTGTTGAGGA
GATCACCCGCCGTTTAGCCGGCCGCTCCCCTAAACAATCGCTTTCGACATTCCTGCGCAAAAGCCTGCGGCTTTCACCCG
CTTCCATCGGTCTTCTCAATGAAGCCTGCGGCATGTTGGGAGAAAAGCCCGTCTCGCTAACGCCGGAACGCCTGGCCTCG
CGCATCCATGCGCTGCCTCTGCGGCTCACCGGCATGGCGCCGATCGCCAAGGCGATTTCCACTGCCGGCGGCGTGGCTTT
GTCCGAACTCGATGAAAATTTCATGCTGCGCCGGCGCTCGGGCCTTTTCATCGCCGGCGAAATGCTCGACTGGGAAGCCC
CGACCGGAGGCTATTTGTTACAGGCTTGTTTCGCGACCGGCCGACGTGCAGGGGAGGGGGTGGTGAACTGGCTCGGGCGT
ATGGCGTAA

Upstream 100 bases:

>100_bases
TGCAGGCGGCGTTGACACCTTCCGCCGATACGACTCTTTGAGCGAGCCTTCCTCCAACGCGCCTGACATCGCTATCATCG
GGGCTGGACCCGCTGGTCTC

Downstream 100 bases:

>100_bases
GTTTATGCCCGCAAAACCGCGCCGGTCTTCTTGCCTACCTCGGTGACGATCTTGGACGCGATGGCCTCGATTTCCGCCTC
GGTCAGGGTTTTTTCGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAAETVARQMSGTGVKVTVYDRMPAVGRKFLLAGRGGLNLTHSEALDILLTRYGSAMPDLASAIRAFPPQALRDWCEGLG
QETFVGSSGRIFPKSFKASPLLRAWLGRLRYLGVQFALRHEWRGFEKENALIFATPEGLFRVEAQACVLALGGASWPRLG
SDGAWVPVLEKAGLAVVPLQPANCGFLVPWSEHFLARFEGAPLKNLRLSCRDHLGVEQASLGEVTITHTGLEGGGLYALG
RFLREDFLNNGEAWLTLSLRPDLTVEEITRRLAGRSPKQSLSTFLRKSLRLSPASIGLLNEACGMLGEKPVSLTPERLAS
RIHALPLRLTGMAPIAKAISTAGGVALSELDENFMLRRRSGLFIAGEMLDWEAPTGGYLLQACFATGRRAGEGVVNWLGR
MA

Sequences:

>Translated_402_residues
MAAETVARQMSGTGVKVTVYDRMPAVGRKFLLAGRGGLNLTHSEALDILLTRYGSAMPDLASAIRAFPPQALRDWCEGLG
QETFVGSSGRIFPKSFKASPLLRAWLGRLRYLGVQFALRHEWRGFEKENALIFATPEGLFRVEAQACVLALGGASWPRLG
SDGAWVPVLEKAGLAVVPLQPANCGFLVPWSEHFLARFEGAPLKNLRLSCRDHLGVEQASLGEVTITHTGLEGGGLYALG
RFLREDFLNNGEAWLTLSLRPDLTVEEITRRLAGRSPKQSLSTFLRKSLRLSPASIGLLNEACGMLGEKPVSLTPERLAS
RIHALPLRLTGMAPIAKAISTAGGVALSELDENFMLRRRSGLFIAGEMLDWEAPTGGYLLQACFATGRRAGEGVVNWLGR
MA
>Mature_401_residues
AAETVARQMSGTGVKVTVYDRMPAVGRKFLLAGRGGLNLTHSEALDILLTRYGSAMPDLASAIRAFPPQALRDWCEGLGQ
ETFVGSSGRIFPKSFKASPLLRAWLGRLRYLGVQFALRHEWRGFEKENALIFATPEGLFRVEAQACVLALGGASWPRLGS
DGAWVPVLEKAGLAVVPLQPANCGFLVPWSEHFLARFEGAPLKNLRLSCRDHLGVEQASLGEVTITHTGLEGGGLYALGR
FLREDFLNNGEAWLTLSLRPDLTVEEITRRLAGRSPKQSLSTFLRKSLRLSPASIGLLNEACGMLGEKPVSLTPERLASR
IHALPLRLTGMAPIAKAISTAGGVALSELDENFMLRRRSGLFIAGEMLDWEAPTGGYLLQACFATGRRAGEGVVNWLGRM
A

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 43608; Mature: 43477

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAETVARQMSGTGVKVTVYDRMPAVGRKFLLAGRGGLNLTHSEALDILLTRYGSAMPDL
CCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHH
ASAIRAFPPQALRDWCEGLGQETFVGSSGRIFPKSFKASPLLRAWLGRLRYLGVQFALRH
HHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EWRGFEKENALIFATPEGLFRVEAQACVLALGGASWPRLGSDGAWVPVLEKAGLAVVPLQ
HHCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCCCCCCCCCCEEHHHHCCCEEEEECC
PANCGFLVPWSEHFLARFEGAPLKNLRLSCRDHLGVEQASLGEVTITHTGLEGGGLYALG
CCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH
RFLREDFLNNGEAWLTLSLRPDLTVEEITRRLAGRSPKQSLSTFLRKSLRLSPASIGLLN
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
EACGMLGEKPVSLTPERLASRIHALPLRLTGMAPIAKAISTAGGVALSELDENFMLRRRS
HHHHHCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GLFIAGEMLDWEAPTGGYLLQACFATGRRAGEGVVNWLGRMA
CCEEEECEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AAETVARQMSGTGVKVTVYDRMPAVGRKFLLAGRGGLNLTHSEALDILLTRYGSAMPDL
CHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHH
ASAIRAFPPQALRDWCEGLGQETFVGSSGRIFPKSFKASPLLRAWLGRLRYLGVQFALRH
HHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EWRGFEKENALIFATPEGLFRVEAQACVLALGGASWPRLGSDGAWVPVLEKAGLAVVPLQ
HHCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCCCCCCCCCCEEHHHHCCCEEEEECC
PANCGFLVPWSEHFLARFEGAPLKNLRLSCRDHLGVEQASLGEVTITHTGLEGGGLYALG
CCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH
RFLREDFLNNGEAWLTLSLRPDLTVEEITRRLAGRSPKQSLSTFLRKSLRLSPASIGLLN
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
EACGMLGEKPVSLTPERLASRIHALPLRLTGMAPIAKAISTAGGVALSELDENFMLRRRS
HHHHHCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GLFIAGEMLDWEAPTGGYLLQACFATGRRAGEGVVNWLGRMA
CCEEEECEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]