| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680083
Identifier: 182680083
GI number: 182680083
Start: 3623757
End: 3624821
Strand: Reverse
Name: 182680083
Synonym: Bind_3180
Alternate gene names: NA
Gene position: 3624821-3623757 (Counterclockwise)
Preceding gene: 182680084
Following gene: 182680082
Centisome position: 86.92
GC content: 53.99
Gene sequence:
>1065_bases ATGGACAATAATCCCGTTCTACTTTGTCACGGCGGATTTTTTGCGATCGATAAGCAATCATGGGCCAAAGTATGCGCCTT GGGGATAAACCCTGCCGTTTCCTATCTCGTGATGGCACGTGGCACTTTGCGAGATCAGCGCACCACGTCATGGTCCACGC ATGCGATCGAAGAGCGAACCAACATCGCACGCCACCGCGCAAAGGCTGCAATTCAGGCTCTGATCGATGCAAGTCTTGTC CGGCAGGATAAGGGCGGATCGAAACCGCGCTACTTCCTTACAGGCGATGAAGACAATCCAGATTGGATCTGGCTTCCAAA TTCTCTCATTGATGGAGCATCAGGCGAGACTCCTCCGATAGAGCTGGTCCGGCAGACACAGAATCCAGCGGCGATCAGGC TGTTCATTGAGCTCTACCATGCACAGTCCCTGCAATTGGATTGCGGCATCCATTGGCGGAAACTGCGGAAAGAATATACA CGCACCAAGGTCGCGGAATATGGTCCGCTTGTTATCTGGGGATTCAAGCCCGGAACTTTAAGCGTGTGGCCAGAGCCACT TGCCAAGCCTCATTTGAAGGGCAAGGTAGAAACCGTCGAGGTGAACGGGGAGAAGGTCAACCGCGATCCTGGCTGGCAGG TGTTCTGGGATGCTCTCAAGGTCCTTGAGCAAATTGGGCTTGTACGGTTCGTTGGTCATCTGATCGATGCGGACACCAAC GAAGGCGAGATCATCCATCCCTATGCAATGCAAAACGGGGAGCCTGGCGAAAACGGAATAACCGGCGCTGCCCATCGAGC AGCCTATGCGATGCTCGCCGAATGGCAGCAAAAGCAAATTGACGGTTCGGGAACTTGGCTCATTCCTGTCCAGAGGCACC TGGCCAATGTGCAGCTTGTTGGGCTGGTGAGACTGACCTATCGGGCCCGAACCAAAGCCACAGCCTCTTGGTATGATCCA GCCAAATGGGAATCTTGGACCAAGGAATATGCGCGACTTGAGGCTGATGTCCAGGCGGGCAAATCGATCTCTGCTCCATC GTTAAAAACAGGCAGTTACGGCTAG
Upstream 100 bases:
>100_bases GGCCCTCATGCTGTTCATAATAATAATATAGCGAGCGCGATCGAGATATGCGCATTTTTTTCGAGCAACAAAGGGCTCAA AGATTAAGGAAACTGAAGGG
Downstream 100 bases:
>100_bases TTTGCAACATCAATGATAGATCAAAGGGTAATCAAAGGGAATTCAAAGGGGCTTCAACGATGCTTATTAGCCAGTACTAA CCCCGCTTCAGTCGCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MDNNPVLLCHGGFFAIDKQSWAKVCALGINPAVSYLVMARGTLRDQRTTSWSTHAIEERTNIARHRAKAAIQALIDASLV RQDKGGSKPRYFLTGDEDNPDWIWLPNSLIDGASGETPPIELVRQTQNPAAIRLFIELYHAQSLQLDCGIHWRKLRKEYT RTKVAEYGPLVIWGFKPGTLSVWPEPLAKPHLKGKVETVEVNGEKVNRDPGWQVFWDALKVLEQIGLVRFVGHLIDADTN EGEIIHPYAMQNGEPGENGITGAAHRAAYAMLAEWQQKQIDGSGTWLIPVQRHLANVQLVGLVRLTYRARTKATASWYDP AKWESWTKEYARLEADVQAGKSISAPSLKTGSYG
Sequences:
>Translated_354_residues MDNNPVLLCHGGFFAIDKQSWAKVCALGINPAVSYLVMARGTLRDQRTTSWSTHAIEERTNIARHRAKAAIQALIDASLV RQDKGGSKPRYFLTGDEDNPDWIWLPNSLIDGASGETPPIELVRQTQNPAAIRLFIELYHAQSLQLDCGIHWRKLRKEYT RTKVAEYGPLVIWGFKPGTLSVWPEPLAKPHLKGKVETVEVNGEKVNRDPGWQVFWDALKVLEQIGLVRFVGHLIDADTN EGEIIHPYAMQNGEPGENGITGAAHRAAYAMLAEWQQKQIDGSGTWLIPVQRHLANVQLVGLVRLTYRARTKATASWYDP AKWESWTKEYARLEADVQAGKSISAPSLKTGSYG >Mature_354_residues MDNNPVLLCHGGFFAIDKQSWAKVCALGINPAVSYLVMARGTLRDQRTTSWSTHAIEERTNIARHRAKAAIQALIDASLV RQDKGGSKPRYFLTGDEDNPDWIWLPNSLIDGASGETPPIELVRQTQNPAAIRLFIELYHAQSLQLDCGIHWRKLRKEYT RTKVAEYGPLVIWGFKPGTLSVWPEPLAKPHLKGKVETVEVNGEKVNRDPGWQVFWDALKVLEQIGLVRFVGHLIDADTN EGEIIHPYAMQNGEPGENGITGAAHRAAYAMLAEWQQKQIDGSGTWLIPVQRHLANVQLVGLVRLTYRARTKATASWYDP AKWESWTKEYARLEADVQAGKSISAPSLKTGSYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39568; Mature: 39568
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNPVLLCHGGFFAIDKQSWAKVCALGINPAVSYLVMARGTLRDQRTTSWSTHAIEERT CCCCCEEEEECCEEEECHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH NIARHRAKAAIQALIDASLVRQDKGGSKPRYFLTGDEDNPDWIWLPNSLIDGASGETPPI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCHHHCCCCCCCCCHH ELVRQTQNPAAIRLFIELYHAQSLQLDCGIHWRKLRKEYTRTKVAEYGPLVIWGFKPGTL HHHHCCCCCHHEEHEEHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC SVWPEPLAKPHLKGKVETVEVNGEKVNRDPGWQVFWDALKVLEQIGLVRFVGHLIDADTN CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EGEIIHPYAMQNGEPGENGITGAAHRAAYAMLAEWQQKQIDGSGTWLIPVQRHLANVQLV CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCEEEE GLVRLTYRARTKATASWYDPAKWESWTKEYARLEADVQAGKSISAPSLKTGSYG EEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MDNNPVLLCHGGFFAIDKQSWAKVCALGINPAVSYLVMARGTLRDQRTTSWSTHAIEERT CCCCCEEEEECCEEEECHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH NIARHRAKAAIQALIDASLVRQDKGGSKPRYFLTGDEDNPDWIWLPNSLIDGASGETPPI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCHHHCCCCCCCCCHH ELVRQTQNPAAIRLFIELYHAQSLQLDCGIHWRKLRKEYTRTKVAEYGPLVIWGFKPGTL HHHHCCCCCHHEEHEEHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC SVWPEPLAKPHLKGKVETVEVNGEKVNRDPGWQVFWDALKVLEQIGLVRFVGHLIDADTN CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EGEIIHPYAMQNGEPGENGITGAAHRAAYAMLAEWQQKQIDGSGTWLIPVQRHLANVQLV CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCEEEE GLVRLTYRARTKATASWYDPAKWESWTKEYARLEADVQAGKSISAPSLKTGSYG EEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA