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The map label for this gene is fdxD [H]

Identifier: 182680053

GI number: 182680053

Start: 3591915

End: 3592379

Strand: Reverse

Name: fdxD [H]

Synonym: Bind_3149

Alternate gene names: 182680053

Gene position: 3592379-3591915 (Counterclockwise)

Preceding gene: 182680055

Following gene: 182680050

Centisome position: 86.15

GC content: 56.13

Gene sequence:

>465_bases
ATGGCTGATATTACTTTTGCCAGCCCCCTGCTTCCTAAGAACAAAACTGTCTATGGTATCGCGGGTGATACGCATACATT
GCTCGCTGTCGCCAGGGACCATCGTATCCCTGTGCCCTTCAATTGCGAGGATGGCGATTGCGGCTCCTGTCTCATCAAGG
TCACGGTCCTTGATGGCAAACAGCCCATGGGCAGCACTTTGTCCGAGAAAGAAAAATTCACGCTCGCGGCGCATGGCAAG
CTGAGCAAGGAGGCCAAGGAACTCGCGGAAATCGCGGATATTCCGCCGCAATACCGTCTGGCCTGTCAGTATATCGTGCG
TGACGAGCCGATCCTGGTGGAATTTTCCGGGGAGCCTGGTGTCGAAATCGATCCCGCCCGCCACAAACACGAGCGGGCCG
CGCTCAATGATATCGAGACGACCGGCGCGGAAGACAGGGAATATGCCGAATCCGTGAAGGCTTGA

Upstream 100 bases:

>100_bases
AGCGTGAGCGCTGGTTGGGGGAAACCAAGTGTTCGCTTGTTCTTTCCGGTCGGCGGCTGGAAAGGGGCAGCGAGCCTGCG
TCAAATCCGGAAGGTTCATC

Downstream 100 bases:

>100_bases
CGCATACTCATCCTTTCCCATCGGTCACAGATGACCGGTGGGAGGGTGTCGCATGTTCACCTTAGAGCATCGGACTTTCA
AATTGAATCATCTCCGATGC

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin V; FdV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MADITFASPLLPKNKTVYGIAGDTHTLLAVARDHRIPVPFNCEDGDCGSCLIKVTVLDGKQPMGSTLSEKEKFTLAAHGK
LSKEAKELAEIADIPPQYRLACQYIVRDEPILVEFSGEPGVEIDPARHKHERAALNDIETTGAEDREYAESVKA

Sequences:

>Translated_154_residues
MADITFASPLLPKNKTVYGIAGDTHTLLAVARDHRIPVPFNCEDGDCGSCLIKVTVLDGKQPMGSTLSEKEKFTLAAHGK
LSKEAKELAEIADIPPQYRLACQYIVRDEPILVEFSGEPGVEIDPARHKHERAALNDIETTGAEDREYAESVKA
>Mature_153_residues
ADITFASPLLPKNKTVYGIAGDTHTLLAVARDHRIPVPFNCEDGDCGSCLIKVTVLDGKQPMGSTLSEKEKFTLAAHGKL
SKEAKELAEIADIPPQYRLACQYIVRDEPILVEFSGEPGVEIDPARHKHERAALNDIETTGAEDREYAESVKA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin probably participates in nitrogen fixation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 16817; Mature: 16686

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADITFASPLLPKNKTVYGIAGDTHTLLAVARDHRIPVPFNCEDGDCGSCLIKVTVLDGK
CCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCC
QPMGSTLSEKEKFTLAAHGKLSKEAKELAEIADIPPQYRLACQYIVRDEPILVEFSGEPG
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHEEECCCCEEEEECCCCC
VEIDPARHKHERAALNDIETTGAEDREYAESVKA
CEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure 
ADITFASPLLPKNKTVYGIAGDTHTLLAVARDHRIPVPFNCEDGDCGSCLIKVTVLDGK
CCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCC
QPMGSTLSEKEKFTLAAHGKLSKEAKELAEIADIPPQYRLACQYIVRDEPILVEFSGEPG
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHEEECCCCEEEEECCCCC
VEIDPARHKHERAALNDIETTGAEDREYAESVKA
CEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7693551 [H]