Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182680034

Identifier: 182680034

GI number: 182680034

Start: 3576875

End: 3577753

Strand: Reverse

Name: 182680034

Synonym: Bind_3130

Alternate gene names: NA

Gene position: 3577753-3576875 (Counterclockwise)

Preceding gene: 182680035

Following gene: 182680033

Centisome position: 85.79

GC content: 55.4

Gene sequence:

>879_bases
ATGCAAAAGTGTCAATTGCCGCCTCGCTCCGGTATCGGTTTCAAACCCGAACATTTCGCGGCGATCGTAGAAGCCCCGCA
ACCGATCGGCTTCTTCGAGGTTCATGCCGAAAATTACATGGGTGCCGGTGGTCCACCCCATGCGCAATTGCGCCGCCTGC
GGGAAAATTACTCCTTGTCCGTGCATGGCGTCGGCCTGTCAATCGGTGGGTGTGAGATCCTGGACACGGAGCATCTTTCG
CGCGTGCAAACCCTCTGCGACCGCTATCAACCGGAAAGCTTTTCCGAACATCTCGCCTGGGTGAGCCATAATGATGTTTT
CTTCAATGATCTTCTACCGCTGCCCTATACGCGGGAGACCTTGAATCATGTCATCGCGCATGTCGATCAGGTGCAATCCA
CGCTCAAACGCCAGATCCTGATCGAAAATCCCTCAAGCTATCTTCTGTTTGCGGAAAGCACGATTCCCGAGCCGCAATTT
CTGGACGAACTCGCCCGCCGCACCGGCTGCGGCCTGTTGCTGGATATCACCAATGTTTTTATCGCGGCGACCAATCATCA
TAGCAATCCACGCGCCTATCTGGCGGATTTTCCGCTCGCTCATGTGCGCGAGATTCATTTGAGCGGTCATATCGTCGAAG
AGACAGCGTCCGACACAAATGGTCGAGACGACAGCAAAGTTTCCTTACTGGTCGATGCCCATGCGCGCTCCGTCGCCGAT
CCGGTTTTCGATCTTTATGCCGAGACCATCGCCCGGACCGGTCCCGTGCCGAGTCTCATCGAATGGGACAATGACGTTCC
GGCTTGGTCGATTTTGCGTCGTGAAGCGGAACGCGTGGATACTTTTCTCTCGAAGGCAATCAGGCAACAGGCCGCGTAG

Upstream 100 bases:

>100_bases
AAAGTCATTCCTGATAAATGTTGGGATGAGCGAAAGACCTGATAGCGGCAGAGATTGTTGCAATTTCTGCCGCCATCCAA
CGCATACGGAGGTGTATCCC

Downstream 100 bases:

>100_bases
GAGTCATCCGTATGTCCTCTCGCACACAATCTCTTTTCGCTGCTGCTTTGCTGAGTGAGAATGGTTCTGCTCCCGAAGGC
CTCGTCGTGGAGGCGGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MQKCQLPPRSGIGFKPEHFAAIVEAPQPIGFFEVHAENYMGAGGPPHAQLRRLRENYSLSVHGVGLSIGGCEILDTEHLS
RVQTLCDRYQPESFSEHLAWVSHNDVFFNDLLPLPYTRETLNHVIAHVDQVQSTLKRQILIENPSSYLLFAESTIPEPQF
LDELARRTGCGLLLDITNVFIAATNHHSNPRAYLADFPLAHVREIHLSGHIVEETASDTNGRDDSKVSLLVDAHARSVAD
PVFDLYAETIARTGPVPSLIEWDNDVPAWSILRREAERVDTFLSKAIRQQAA

Sequences:

>Translated_292_residues
MQKCQLPPRSGIGFKPEHFAAIVEAPQPIGFFEVHAENYMGAGGPPHAQLRRLRENYSLSVHGVGLSIGGCEILDTEHLS
RVQTLCDRYQPESFSEHLAWVSHNDVFFNDLLPLPYTRETLNHVIAHVDQVQSTLKRQILIENPSSYLLFAESTIPEPQF
LDELARRTGCGLLLDITNVFIAATNHHSNPRAYLADFPLAHVREIHLSGHIVEETASDTNGRDDSKVSLLVDAHARSVAD
PVFDLYAETIARTGPVPSLIEWDNDVPAWSILRREAERVDTFLSKAIRQQAA
>Mature_292_residues
MQKCQLPPRSGIGFKPEHFAAIVEAPQPIGFFEVHAENYMGAGGPPHAQLRRLRENYSLSVHGVGLSIGGCEILDTEHLS
RVQTLCDRYQPESFSEHLAWVSHNDVFFNDLLPLPYTRETLNHVIAHVDQVQSTLKRQILIENPSSYLLFAESTIPEPQF
LDELARRTGCGLLLDITNVFIAATNHHSNPRAYLADFPLAHVREIHLSGHIVEETASDTNGRDDSKVSLLVDAHARSVAD
PVFDLYAETIARTGPVPSLIEWDNDVPAWSILRREAERVDTFLSKAIRQQAA

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 32641; Mature: 32641

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKCQLPPRSGIGFKPEHFAAIVEAPQPIGFFEVHAENYMGAGGPPHAQLRRLRENYSLS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEE
VHGVGLSIGGCEILDTEHLSRVQTLCDRYQPESFSEHLAWVSHNDVFFNDLLPLPYTRET
EEEEEEEECCEEEECHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCCCCCCHHH
LNHVIAHVDQVQSTLKRQILIENPSSYLLFAESTIPEPQFLDELARRTGCGLLLDITNVF
HHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEEHHEE
IAATNHHSNPRAYLADFPLAHVREIHLSGHIVEETASDTNGRDDSKVSLLVDAHARSVAD
EEEECCCCCCCEEEECCCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECHHHHHHH
PVFDLYAETIARTGPVPSLIEWDNDVPAWSILRREAERVDTFLSKAIRQQAA
HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKCQLPPRSGIGFKPEHFAAIVEAPQPIGFFEVHAENYMGAGGPPHAQLRRLRENYSLS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEE
VHGVGLSIGGCEILDTEHLSRVQTLCDRYQPESFSEHLAWVSHNDVFFNDLLPLPYTRET
EEEEEEEECCEEEECHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCCCCCCHHH
LNHVIAHVDQVQSTLKRQILIENPSSYLLFAESTIPEPQFLDELARRTGCGLLLDITNVF
HHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEEHHEE
IAATNHHSNPRAYLADFPLAHVREIHLSGHIVEETASDTNGRDDSKVSLLVDAHARSVAD
EEEECCCCCCCEEEECCCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECHHHHHHH
PVFDLYAETIARTGPVPSLIEWDNDVPAWSILRREAERVDTFLSKAIRQQAA
HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA