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The map label for this gene is ifcA [H]

Identifier: 182679989

GI number: 182679989

Start: 3522223

End: 3523803

Strand: Reverse

Name: ifcA [H]

Synonym: Bind_3085

Alternate gene names: 182679989

Gene position: 3523803-3522223 (Counterclockwise)

Preceding gene: 182679994

Following gene: 182679988

Centisome position: 84.5

GC content: 56.67

Gene sequence:

>1581_bases
ATGATTGTTGATACAGATGTTCTTGTCATCGGTGGCGGAATGGCAGCAGCCTGGGCGGCTATTTCGGCCGCGCGGGAAGG
TGCCGATGTCGTTGTCGTGGACAAAGGCTTCGTCGGGACCAGTGGTGTTACAGCGACGGGCGGGCCGAACCATTGGTGGG
TTCCTCCGGACGATGCACAGCGTGAATCCGCGGTCGAACGTCGATATGCAACGAGTTGCGGCCTTGCCGACAAGGGATGG
ATGGCGAGGATCATCGATATAACCTGGCAGACATTACCGCAGCTCGCTGGATATTACCGCTTTGCCACAGACAGCCGAGG
TCAGCCTTATTATCCCGGTGTCAGGGGACCCGAATATTTACGAGCATTGCGTAATCTCGCCCTGGAGAGCGGCGTCCATA
TTTTCGATCAGCATCCGGCTCTTGAACTCCTGGTTCACAAGGATGGGTCCATTGCCGGTGCAGCAGGCTATGCGCGACTT
GAAAGGCAACATTGGCAAATTCGCGCCGGAGCCGTGATTCTGGCGACGGGTGGCTGTGCTTTTCGTTCGGGTTTGATCGG
CAGCTATACCAACACAGGCGATGGTCATTTGATGGCTGGCGAGGTCGGCGCCGAATTTTCTGGCATGGAATTCAACGTTG
CCTATTCGATTTCTCCGGCCTGGATTTCAACACGCACGCTTCCGTATACAGGAGCACGCTATTACGATGTGTCCGGTCAG
GAGCTTGATATTCCACCGTTCAGGTCAGGGACCGCTTATTTGAAGGCTCTCGCGAAAGCGTTTGCCGCAGGGCCTGTCTA
TGCGGATTTGCATGACGCTCCTGTCGATTTGAAATCGATACTGCGGCACATTCAGCCCGCAACCATCGCTCCTTTCGAGC
GGAAGGGGATCAAGATCTTCGAGGATCGTTTCGAGGTGAAACTTTTTGGCGAAGGGACGGTGCGTGGGACGGGGGGATTG
AAAATCACCGGGGCGCATTGCGAGACAAGTATTGCGGGACTTTATGCGGCGGGAGATACAGCGACGCGGGAGCTTATCGC
TGGTGCGACAAGCGGCGGCGGTGCACAAAACGCCGCTTGGGCGTTAACATCGGGCATCCTGTCTGGCAAAGGTGCCGCAC
ATTTGGCGCGTCGGTTAGGTCGCCGCTCCACTGAGACCATTAAGCCTGCGGGTGCAGCCGCGCTGCGTCCCTCTGGCACA
GCCAAACCGATCGACATGCAGGCGATTGTTCAGCGCGTGCAAGATCAGGTCCTGCCATTGGAGCGTGCTCTTTGGCGCAC
ATCCAAAGACCTGTCGAACACAAGCGTTCTTCTGGATGAGGCATGGCGTGAGATTATTGTGTATGGCCATGCTGAAGGTC
TTGGGATCGTCGCTGCCCGTGAGACAGCGGCAATGACCTCGGTGGCGCGTTTATGTACCGCGGCCGCACTCGCACGCGAG
GAAAGCCGCGGTATTCATTCGCGTGCTGACAGGACGGATACGGTTCCGGAATATACGAGCCGTTTGCTTGTTGGCGGTCT
GGACTCGGATCATCTTTGGACGCGCTATGAAACAGATACGACAATGAAGGCTATTGCATGA

Upstream 100 bases:

>100_bases
ACATTTCGTGGCCAGGCCTTTTGGGATTTTGGTTTCCAAGGGACGTTGGTGAAATGCTGCCCCCTGGTTGTTCTGACTCC
CTGTTTCGATGGAAATTGAC

Downstream 100 bases:

>100_bases
TCGTGCATATTTTCGAAGATCTCTGCACAGGCTGCAATGCATGCGTTGCAGCCTGTCCCACGCATGTTCTTGATCCGGCG
GAAGCGGGCAGGGTTCCGCT

Product: fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MIVDTDVLVIGGGMAAAWAAISAAREGADVVVVDKGFVGTSGVTATGGPNHWWVPPDDAQRESAVERRYATSCGLADKGW
MARIIDITWQTLPQLAGYYRFATDSRGQPYYPGVRGPEYLRALRNLALESGVHIFDQHPALELLVHKDGSIAGAAGYARL
ERQHWQIRAGAVILATGGCAFRSGLIGSYTNTGDGHLMAGEVGAEFSGMEFNVAYSISPAWISTRTLPYTGARYYDVSGQ
ELDIPPFRSGTAYLKALAKAFAAGPVYADLHDAPVDLKSILRHIQPATIAPFERKGIKIFEDRFEVKLFGEGTVRGTGGL
KITGAHCETSIAGLYAAGDTATRELIAGATSGGGAQNAAWALTSGILSGKGAAHLARRLGRRSTETIKPAGAAALRPSGT
AKPIDMQAIVQRVQDQVLPLERALWRTSKDLSNTSVLLDEAWREIIVYGHAEGLGIVAARETAAMTSVARLCTAAALARE
ESRGIHSRADRTDTVPEYTSRLLVGGLDSDHLWTRYETDTTMKAIA

Sequences:

>Translated_526_residues
MIVDTDVLVIGGGMAAAWAAISAAREGADVVVVDKGFVGTSGVTATGGPNHWWVPPDDAQRESAVERRYATSCGLADKGW
MARIIDITWQTLPQLAGYYRFATDSRGQPYYPGVRGPEYLRALRNLALESGVHIFDQHPALELLVHKDGSIAGAAGYARL
ERQHWQIRAGAVILATGGCAFRSGLIGSYTNTGDGHLMAGEVGAEFSGMEFNVAYSISPAWISTRTLPYTGARYYDVSGQ
ELDIPPFRSGTAYLKALAKAFAAGPVYADLHDAPVDLKSILRHIQPATIAPFERKGIKIFEDRFEVKLFGEGTVRGTGGL
KITGAHCETSIAGLYAAGDTATRELIAGATSGGGAQNAAWALTSGILSGKGAAHLARRLGRRSTETIKPAGAAALRPSGT
AKPIDMQAIVQRVQDQVLPLERALWRTSKDLSNTSVLLDEAWREIIVYGHAEGLGIVAARETAAMTSVARLCTAAALARE
ESRGIHSRADRTDTVPEYTSRLLVGGLDSDHLWTRYETDTTMKAIA
>Mature_526_residues
MIVDTDVLVIGGGMAAAWAAISAAREGADVVVVDKGFVGTSGVTATGGPNHWWVPPDDAQRESAVERRYATSCGLADKGW
MARIIDITWQTLPQLAGYYRFATDSRGQPYYPGVRGPEYLRALRNLALESGVHIFDQHPALELLVHKDGSIAGAAGYARL
ERQHWQIRAGAVILATGGCAFRSGLIGSYTNTGDGHLMAGEVGAEFSGMEFNVAYSISPAWISTRTLPYTGARYYDVSGQ
ELDIPPFRSGTAYLKALAKAFAAGPVYADLHDAPVDLKSILRHIQPATIAPFERKGIKIFEDRFEVKLFGEGTVRGTGGL
KITGAHCETSIAGLYAAGDTATRELIAGATSGGGAQNAAWALTSGILSGKGAAHLARRLGRRSTETIKPAGAAALRPSGT
AKPIDMQAIVQRVQDQVLPLERALWRTSKDLSNTSVLLDEAWREIIVYGHAEGLGIVAARETAAMTSVARLCTAAALARE
ESRGIHSRADRTDTVPEYTSRLLVGGLDSDHLWTRYETDTTMKAIA

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 56153; Mature: 56153

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDTDVLVIGGGMAAAWAAISAAREGADVVVVDKGFVGTSGVTATGGPNHWWVPPDDAQ
CEEECEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCHH
RESAVERRYATSCGLADKGWMARIIDITWQTLPQLAGYYRFATDSRGQPYYPGVRGPEYL
HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHH
RALRNLALESGVHIFDQHPALELLVHKDGSIAGAAGYARLERQHWQIRAGAVILATGGCA
HHHHHHHHHCCCEEEECCCCEEEEEECCCCEECHHHHHHHHHHHEEEEECEEEEEECCHH
FRSGLIGSYTNTGDGHLMAGEVGAEFSGMEFNVAYSISPAWISTRTLPYTGARYYDVSGQ
HHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCEEEECCCC
ELDIPPFRSGTAYLKALAKAFAAGPVYADLHDAPVDLKSILRHIQPATIAPFERKGIKIF
EECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEE
EDRFEVKLFGEGTVRGTGGLKITGAHCETSIAGLYAAGDTATRELIAGATSGGGAQNAAW
ECCEEEEEEECCEEECCCCEEEECCCCCCCHHEEEECCCHHHHHHHHCCCCCCCCCCHHH
ALTSGILSGKGAAHLARRLGRRSTETIKPAGAAALRPSGTAKPIDMQAIVQRVQDQVLPL
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH
ERALWRTSKDLSNTSVLLDEAWREIIVYGHAEGLGIVAARETAAMTSVARLCTAAALARE
HHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
ESRGIHSRADRTDTVPEYTSRLLVGGLDSDHLWTRYETDTTMKAIA
HHCCCHHHCCCCCCCHHHHHHHEECCCCCCCCEEEECCCCHHHHCC
>Mature Secondary Structure
MIVDTDVLVIGGGMAAAWAAISAAREGADVVVVDKGFVGTSGVTATGGPNHWWVPPDDAQ
CEEECEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCHH
RESAVERRYATSCGLADKGWMARIIDITWQTLPQLAGYYRFATDSRGQPYYPGVRGPEYL
HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHH
RALRNLALESGVHIFDQHPALELLVHKDGSIAGAAGYARLERQHWQIRAGAVILATGGCA
HHHHHHHHHCCCEEEECCCCEEEEEECCCCEECHHHHHHHHHHHEEEEECEEEEEECCHH
FRSGLIGSYTNTGDGHLMAGEVGAEFSGMEFNVAYSISPAWISTRTLPYTGARYYDVSGQ
HHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCEEEECCCC
ELDIPPFRSGTAYLKALAKAFAAGPVYADLHDAPVDLKSILRHIQPATIAPFERKGIKIF
EECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEE
EDRFEVKLFGEGTVRGTGGLKITGAHCETSIAGLYAAGDTATRELIAGATSGGGAQNAAW
ECCEEEEEEECCEEECCCCEEEECCCCCCCHHEEEECCCHHHHHHHHCCCCCCCCCCHHH
ALTSGILSGKGAAHLARRLGRRSTETIKPAGAAALRPSGTAKPIDMQAIVQRVQDQVLPL
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH
ERALWRTSKDLSNTSVLLDEAWREIIVYGHAEGLGIVAARETAAMTSVARLCTAAALARE
HHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
ESRGIHSRADRTDTVPEYTSRLLVGGLDSDHLWTRYETDTTMKAIA
HHCCCHHHCCCCCCCHHHHHHHEECCCCCCCCEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]