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The map label for this gene is recO

Identifier: 182679932

GI number: 182679932

Start: 3445630

End: 3446382

Strand: Reverse

Name: recO

Synonym: Bind_3027

Alternate gene names: 182679932

Gene position: 3446382-3445630 (Counterclockwise)

Preceding gene: 182679933

Following gene: 182679926

Centisome position: 82.64

GC content: 61.49

Gene sequence:

>753_bases
ATGGAATGGCATGATGAAGGACTGATCATCGGGCTCAGGCGCTACGGCGAGACGGGCGCCATTCTGGAGGTTTTTACACC
GGCGCATGGACGCCATTTCGGGCTGGTGCGGGGCGGTTTCGGGCGTCGTCTGCGGGCCTTACTGCAACCCGGCAACCAAG
CTGATTTCACCTGGCGCGCGCGGCTCGATCAACAGCTCGGGCTCCTTGCCGTGGAGCCGACGAAACTCATGACCACGCGG
CTCTTTGCCAGTGGTCTCGCGCTTCAAGGTATGAATCTGATTGCCGCGCTATTGCGCCTTTTGCCCGAGCGCGACCCCCA
TCCAGAGCTCTATGCCGTGGTGCGGGTGCTCCTTGAGCATCTCGACGAGCCGGCTGTGGCGCCGATCCTCCTCGCACGTT
TCGAACTCGCAATGCTGACGGAAACCGGCTTTGGGCTTGATCTTTCCGCTTGCGCGGCGACCGGCGCGACGCAGGAATTG
ATCTATGTCTCGCCGAAATCGGGCCGGGCCGTCTCGGCCAGGGCAGGCGCGCCCTATCACGACAAGCTGTTGGGCTTGCC
GCCCTTTTTCCTGGATGGGAGCCTGTTGAAAAACCCCACTCTGGAAGAGGTCGAAGCCGGCTTCGCTCTAACGGGTCATT
TTCTGATGCGCGACCTCTTTGGCCCGCGCGGTCAGACACTTCCGGATGCGCGCCATGCTTTTTTGGCGGAAACCGCCAAA
ACCTATCCGCGTGTCGCGCCACAGTGTTTTTGA

Upstream 100 bases:

>100_bases
GTCGCGCCGCTCGCTGATGCCGTGCGGGTGCATCAAGCCTTGCAGGCGCGTGAAACCACCGGCGCGACGGTGCTGGTCCC
GTGATCCTGGCTGAGCGACC

Downstream 100 bases:

>100_bases
AACCAGCGATCATGGATGTGATCGCTGCGAAGCGTTCTCAAGAAACGAAAATGCGAGACAGGAACCAAGAGGCGTTCATC
ACGGCCTCGGCCGTGAGAAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRARLDQQLGLLAVEPTKLMTTR
LFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEHLDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQEL
IYVSPKSGRAVSARAGAPYHDKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMRDLFGPRGQTLPDARHAFLAETAK
TYPRVAPQCF

Sequences:

>Translated_250_residues
MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRARLDQQLGLLAVEPTKLMTTR
LFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEHLDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQEL
IYVSPKSGRAVSARAGAPYHDKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMRDLFGPRGQTLPDARHAFLAETAK
TYPRVAPQCF
>Mature_250_residues
MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRARLDQQLGLLAVEPTKLMTTR
LFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEHLDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQEL
IYVSPKSGRAVSARAGAPYHDKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMRDLFGPRGQTLPDARHAFLAETAK
TYPRVAPQCF

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_BEII9 (B2IBG3)

Other databases:

- EMBL:   CP001016
- RefSeq:   YP_001834078.1
- GeneID:   6198225
- GenomeReviews:   CP001016_GR
- KEGG:   bid:Bind_3027
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   CLSK2405812
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27402; Mature: 27402

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRA
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCCCCEEHHH
RLDQQLGLLAVEPTKLMTTRLFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEH
HHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQELIYVSPKSGRAVSARAGAPYH
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEECCCCCCHH
DKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMRDLFGPRGQTLPDARHAFLAETAK
HHHCCCCCHHCCCHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TYPRVAPQCF
HHCCCCCCCC
>Mature Secondary Structure
MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRA
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCCCCEEHHH
RLDQQLGLLAVEPTKLMTTRLFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEH
HHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQELIYVSPKSGRAVSARAGAPYH
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEECCCCCCHH
DKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMRDLFGPRGQTLPDARHAFLAETAK
HHHCCCCCHHCCCHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TYPRVAPQCF
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA