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The map label for this gene is rbsC [H]

Identifier: 182679774

GI number: 182679774

Start: 3265956

End: 3266993

Strand: Reverse

Name: rbsC [H]

Synonym: Bind_2862

Alternate gene names: 182679774

Gene position: 3266993-3265956 (Counterclockwise)

Preceding gene: 182679775

Following gene: 182679773

Centisome position: 78.34

GC content: 57.51

Gene sequence:

>1038_bases
ATGATCACGACATCCTCACCTGGCTTGCATACTCCCCGGACCGGACTCCGAATAGCCTTCGGTCCACTGTTCCAGGCGCT
CGGCATGTTGCCGGTGCTGATCCTGATCAGCTTGATGTTTCAATTGCTGACGGGTTATGCCGAGACTGGCACTCTACAAG
GCGCCTGGGCAGAAGGCCGTTTTCTGAGTTGGCAGAATCTTTCAATCGTCGCGCAGCAGGCCTCGATCAATACGGTGCTG
GCCGCTGGTATGACCTTCGTCATTCTGACAGGCGGCATCGATCTGTCGGTGGGTTCCATCCTTGCCGCTTCGGCCATGGT
CTCGGTTCTGACCTCTCTGATCCCGGGGCTCGGCTTCCTCGGTTTACCGGCGGCGCTGGTGACGGGGCTTCTGCTTGGTC
TCGCCAATGGACTGCTCATCGCTTTTCTCAAACTGCCGCCGTTCATTGTGACTTTGGGTTCGATGACCGCTGTGCGTGGG
TTGGCGCGCCTCGTCGGCAATGACACTACGGTCTTCAATCCCGATCTGTCCTTTGCTTTCATCGGCAATGCGTCCTTGTT
TGGGATTCCTTGGCTGGTCATCATTGCCTTTGCTGTGGTGGTGGTGTCTTGGGTCGTCTTGCGTCGCACAGTGCTCGGCA
TGCATATCTATGCGGTCGGTGGCAATCCGGCGGCGGCGCATCTGTCTGGTATCAAAGTCTGGATCGTCCTTCTCTTTGTA
TACAGCCTTTCCGGCCTGCTTTCGGGTCTTGGAGGCGCCATGTCGGCCGCGAGGCTTTTCGCAGCCAACGGGCTTCAACT
CGGCCAATCCTATGAGCTCGATGCAATCGCAGCGGTCATCCTCGGCGGGACGAGTTTCGTCGGCGGCATCGGCTCGATTT
GGGGGACTTTGGTCGGTGCGCTGATCATCGCGGTTCTGTCGAATGGTTTGATCCTGACAGGTGTATCCGACATCTGGCAG
TTCATCATCAAGGGTATCGTTATCATCGGTGCCGTCGCCCTTGATCGCTATCGCTTGAAGGGTTCTGCCCGTACCTGA

Upstream 100 bases:

>100_bases
GACCACGACGATGACTGATGCCGACGCGGTTGCTGTTGCCGCTTGAGGCCTCTTCCTTCCGCACATTCGTAAACCAGCGT
TTCGCAAAAGAGTGGCACGC

Downstream 100 bases:

>100_bases
CAGGCTCATGGTTCGTCACGAAAATTGGCGGTTCGGGCGATAAAAAAGACCAATAATGGTGGAGGGAATGAATATGAAAA
AGGTGTTAATGAGTGCCGTG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MITTSSPGLHTPRTGLRIAFGPLFQALGMLPVLILISLMFQLLTGYAETGTLQGAWAEGRFLSWQNLSIVAQQASINTVL
AAGMTFVILTGGIDLSVGSILAASAMVSVLTSLIPGLGFLGLPAALVTGLLLGLANGLLIAFLKLPPFIVTLGSMTAVRG
LARLVGNDTTVFNPDLSFAFIGNASLFGIPWLVIIAFAVVVVSWVVLRRTVLGMHIYAVGGNPAAAHLSGIKVWIVLLFV
YSLSGLLSGLGGAMSAARLFAANGLQLGQSYELDAIAAVILGGTSFVGGIGSIWGTLVGALIIAVLSNGLILTGVSDIWQ
FIIKGIVIIGAVALDRYRLKGSART

Sequences:

>Translated_345_residues
MITTSSPGLHTPRTGLRIAFGPLFQALGMLPVLILISLMFQLLTGYAETGTLQGAWAEGRFLSWQNLSIVAQQASINTVL
AAGMTFVILTGGIDLSVGSILAASAMVSVLTSLIPGLGFLGLPAALVTGLLLGLANGLLIAFLKLPPFIVTLGSMTAVRG
LARLVGNDTTVFNPDLSFAFIGNASLFGIPWLVIIAFAVVVVSWVVLRRTVLGMHIYAVGGNPAAAHLSGIKVWIVLLFV
YSLSGLLSGLGGAMSAARLFAANGLQLGQSYELDAIAAVILGGTSFVGGIGSIWGTLVGALIIAVLSNGLILTGVSDIWQ
FIIKGIVIIGAVALDRYRLKGSART
>Mature_345_residues
MITTSSPGLHTPRTGLRIAFGPLFQALGMLPVLILISLMFQLLTGYAETGTLQGAWAEGRFLSWQNLSIVAQQASINTVL
AAGMTFVILTGGIDLSVGSILAASAMVSVLTSLIPGLGFLGLPAALVTGLLLGLANGLLIAFLKLPPFIVTLGSMTAVRG
LARLVGNDTTVFNPDLSFAFIGNASLFGIPWLVIIAFAVVVVSWVVLRRTVLGMHIYAVGGNPAAAHLSGIKVWIVLLFV
YSLSGLLSGLGGAMSAARLFAANGLQLGQSYELDAIAAVILGGTSFVGGIGSIWGTLVGALIIAVLSNGLILTGVSDIWQ
FIIKGIVIIGAVALDRYRLKGSART

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4158

COG function: function code R; Predicted ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=284, Percent_Identity=44.3661971830986, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1790524, Length=286, Percent_Identity=39.5104895104895, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI145693152, Length=346, Percent_Identity=31.5028901734104, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI145693214, Length=250, Percent_Identity=43.2, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1788471, Length=294, Percent_Identity=38.4353741496599, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1788896, Length=280, Percent_Identity=34.6428571428571, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87082395, Length=269, Percent_Identity=37.1747211895911, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1789992, Length=350, Percent_Identity=31.1428571428571, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787793, Length=286, Percent_Identity=33.5664335664336, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787794, Length=279, Percent_Identity=30.8243727598566, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35642; Mature: 35642

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTSSPGLHTPRTGLRIAFGPLFQALGMLPVLILISLMFQLLTGYAETGTLQGAWAEGR
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
FLSWQNLSIVAQQASINTVLAAGMTFVILTGGIDLSVGSILAASAMVSVLTSLIPGLGFL
EECCCCHHHEEHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
GLPAALVTGLLLGLANGLLIAFLKLPPFIVTLGSMTAVRGLARLVGNDTTVFNPDLSFAF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
IGNASLFGIPWLVIIAFAVVVVSWVVLRRTVLGMHIYAVGGNPAAAHLSGIKVWIVLLFV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH
YSLSGLLSGLGGAMSAARLFAANGLQLGQSYELDAIAAVILGGTSFVGGIGSIWGTLVGA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LIIAVLSNGLILTGVSDIWQFIIKGIVIIGAVALDRYRLKGSART
HHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MITTSSPGLHTPRTGLRIAFGPLFQALGMLPVLILISLMFQLLTGYAETGTLQGAWAEGR
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
FLSWQNLSIVAQQASINTVLAAGMTFVILTGGIDLSVGSILAASAMVSVLTSLIPGLGFL
EECCCCHHHEEHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
GLPAALVTGLLLGLANGLLIAFLKLPPFIVTLGSMTAVRGLARLVGNDTTVFNPDLSFAF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
IGNASLFGIPWLVIIAFAVVVVSWVVLRRTVLGMHIYAVGGNPAAAHLSGIKVWIVLLFV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH
YSLSGLLSGLGGAMSAARLFAANGLQLGQSYELDAIAAVILGGTSFVGGIGSIWGTLVGA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LIIAVLSNGLILTGVSDIWQFIIKGIVIIGAVALDRYRLKGSART
HHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]