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The map label for this gene is oprB [H]

Identifier: 182679772

GI number: 182679772

Start: 3263483

End: 3264847

Strand: Reverse

Name: oprB [H]

Synonym: Bind_2860

Alternate gene names: 182679772

Gene position: 3264847-3263483 (Counterclockwise)

Preceding gene: 182679773

Following gene: 182679771

Centisome position: 78.29

GC content: 58.68

Gene sequence:

>1365_bases
ATGAGTATGGCGTTAACACACTTGAAACAGAGGGCCACGAGAATCGCGGGGATTTTGGCCTTGGGTTTGGGACTGACGCA
GGGCGGGACGGCAGCACGGGCCGCGGATGTCGCGCCGCCAGCCCAAGTGGCGGTGTCGCCCGCGCCTCCCGTCCCGGAAC
ATGACTGGGCCTTGGGGACTTGGGGCGGGGTGCGCTCCGATCTTTATCGCAAGGGTATCGATTTCCAATTCGTCTGGGTC
AGCGAAGTCGCCTATAACATGACCGGCGGCGCGGAAAACCGCATCGCCCAGGCCGGCCAGTTGAACCTTGGCGTCACCTT
CGATCTGGAAAAATTATTCGGCGATCCGGGTGCCATCTTCCAGATGACCTTCGATAAGCGCGAGGGCCGCAATCTCAATC
ATGATGCCGGCCTCGACATGCTGGTCCAGCCGCAGGAAGTCTATGGCCGCGGTGACATCTGGCGCCTGACGCAATTCTGG
TACGATCAGAAATTCGCCAATGGCGTGATCGATTGGAAAATCGGCAAGATGGCGGTGAGTGAAGACATCACCCAATATCC
TTGCGTGTTCATGAACCTGTCGTTCTGCGGCTCGGCGCCGGGCCGCGGCCTCGCCGGCAATTATTTCTTCAATTATCCGA
TCGGCCAATGGGGCACGCGGGTGCGCTTCAACGCGCCGGAAGCCTATTTCACCCTGGCGGCCTATCAGATGAACCCCAAC
GTCTTGAAACAAAGCTATGGGGTGAATTTCGATTTCAGCGGCGGCAACGGGGTCCTGCTGCCGATCGAATTCGGCTGGCT
GCCGGCTTTTGATGGAGGCCGTCTGCCCGGTGTCTACCAATTCACCGCCTGGTATGGCTCGCAGCAGGCTCAAAACGTCG
TGGCCCTCAATTACCCGAATCTCGTGCCGCTCAGCGATCTGCCGGTGGGTGGCCGCTGGGGCGTGAGCTTTCAGATGTCG
CAGCAGCTCACGCATCCTTCCGATGATCATCCCAAACAGGGCCTGAGCCTGATCGGCAGCATGGTGATGCTTGATCGGGC
GACCTCGACGCTCAACAACCAGGAGACCATCGGCCTCGTCTATCACGGACCGTTCGAGAACCGTCAGGGCGATGAAATCG
CCATTGCCTGGGGCCGCACGGAGGTCAATTCGCGCCTGACCAATGCCGCGATCCTGTCCAATGTCCTCGTGCCTGGCTCG
GCCGTCGTGCGACGCGCCGAATATCCCTTGGAAATCTACTACAACTTCCATGCCTATAACGGCATTGATGTGCGTCCGAA
CTTCCAATGGATTCACTGCCCAGGCGGTATTTGTAACAAACCGGATGTGGCCATCCTCGGCGTGAAAACTGTCATTAATT
TCTAA

Upstream 100 bases:

>100_bases
TGAGTCTCAGGGGAAGATAAAAAGCTTCATGCCGGTGAAAAGCCAGAAGCAAGAAGAAATGGCATTGGCATTGGCATGAA
GCTGAGGGAGGGGAATGAGT

Downstream 100 bases:

>100_bases
AAGTTCTACGACGATGGGGCGTTCTGGCTATCAACAAAAACTGAATCGCATTCATCGTCGATGAACATATAAATTATCAA
GAAGAAGTAACAGGACGAAC

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSMALTHLKQRATRIAGILALGLGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGTWGGVRSDLYRKGIDFQFVWV
SEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIFQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFW
YDQKFANGVIDWKIGKMAVSEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNPN
VLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQNVVALNYPNLVPLSDLPVGGRWGVSFQMS
QQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLVYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGS
AVVRRAEYPLEIYYNFHAYNGIDVRPNFQWIHCPGGICNKPDVAILGVKTVINF

Sequences:

>Translated_454_residues
MSMALTHLKQRATRIAGILALGLGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGTWGGVRSDLYRKGIDFQFVWV
SEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIFQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFW
YDQKFANGVIDWKIGKMAVSEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNPN
VLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQNVVALNYPNLVPLSDLPVGGRWGVSFQMS
QQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLVYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGS
AVVRRAEYPLEIYYNFHAYNGIDVRPNFQWIHCPGGICNKPDVAILGVKTVINF
>Mature_453_residues
SMALTHLKQRATRIAGILALGLGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGTWGGVRSDLYRKGIDFQFVWVS
EVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIFQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFWY
DQKFANGVIDWKIGKMAVSEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNPNV
LKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQNVVALNYPNLVPLSDLPVGGRWGVSFQMSQ
QLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLVYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGSA
VVRRAEYPLEIYYNFHAYNGIDVRPNFQWIHCPGGICNKPDVAILGVKTVINF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 49970; Mature: 49839

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMALTHLKQRATRIAGILALGLGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEC
WGGVRSDLYRKGIDFQFVWVSEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIF
CCCHHHHHHHCCCCEEEEEEEHEEEECCCCCCHHHHCCCCEEEEEEEEHHHHHCCCCEEE
QMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFWYDQKFANGVIDWKIGKMAVS
EEEECCCCCCCCCCCCCCCEEECHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEECCEEHH
EDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNPN
CCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEEEEECCHH
VLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQNVVALNYPN
HHHHHCCCEEEECCCCEEEEEEEECCEECCCCCCCCCEEEEEEECCCCCCCCEEEEECCC
LVPLSDLPVGGRWGVSFQMSQQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLV
CCCCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
YHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGSAVVRRAEYPLEIYYNFHAYN
EECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEC
GIDVRPNFQWIHCPGGICNKPDVAILGVKTVINF
CEEECCCCEEEECCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
SMALTHLKQRATRIAGILALGLGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEC
WGGVRSDLYRKGIDFQFVWVSEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIF
CCCHHHHHHHCCCCEEEEEEEHEEEECCCCCCHHHHCCCCEEEEEEEEHHHHHCCCCEEE
QMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFWYDQKFANGVIDWKIGKMAVS
EEEECCCCCCCCCCCCCCCEEECHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEECCEEHH
EDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNPN
CCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEEEEECCHH
VLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQNVVALNYPN
HHHHHCCCEEEECCCCEEEEEEEECCEECCCCCCCCCEEEEEEECCCCCCCCEEEEECCC
LVPLSDLPVGGRWGVSFQMSQQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLV
CCCCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
YHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGSAVVRRAEYPLEIYYNFHAYN
EECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEC
GIDVRPNFQWIHCPGGICNKPDVAILGVKTVINF
CEEECCCCEEEECCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]