| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is camA [H]
Identifier: 182679762
GI number: 182679762
Start: 3249175
End: 3250419
Strand: Reverse
Name: camA [H]
Synonym: Bind_2850
Alternate gene names: 182679762
Gene position: 3250419-3249175 (Counterclockwise)
Preceding gene: 182679763
Following gene: 182679759
Centisome position: 77.94
GC content: 61.04
Gene sequence:
>1245_bases ATGGTGGATCAGTCCGATCCGCGTCAGACGCGGATCGTTGTCGTTGGCGCGGGACATGCCGGCGGCACTTTTGTCAGCTT GATGCGTGAGATGGGGCATGAGGGGCCAATCCTTGTGATTGGCGAGGAAACGGCTGCTCCCTATCAGAGACCACCCCTTT CCAAGGACTATCTCAAGGGCAATCTCGCCGAGGACTCTTTGTTTCTGCGTGCTCCTTCTTTCTATGAGGAGCGCAAGATC ATCGTACGGACGGGCGAGAGCGTGGAGAGGATCGATCGCGAGGAAAAAGCGATCCGTCTCGCGGGTGGTGACGTCGAGCC CTATGATGTGCTGGTCTTGGCCACAGGGTCCGAAAACCGTCGTTTGGGCGTCGAGGGAGCAGATCTTACCAATATTTTTG GACTGCGGACGCTGGCTGAGGCCGGTCTCTTGAAACAGGTCCTGCGGCCGGAAAGCCGCCTCGCTGTCATCGGTGGCGGC TATGTGGGTCTTGAGGTCGCGGCCTCCGCCCGCCTGCTCGGTGCCGATGTCGTGGTGATTGAGCGCGAGCCCCGGGTTCT GGCCCGCGTTGCTTGCGAGCCTTTGTCACGGTTCTATGAATCCCATCATCGCGCCCAGGGCGTCCGCATTGAAACCGGGG CGCAGGTGACGGGCTTCGAAGGGGATGCCGGAAGCATTGCCGGGGTCAGGCTGGCGGATGCGCGGCAATTTGCCTGCGAT GTCGCAATCGTAGGCATCGGGGCCGTGGCGCGCGATAGGCTGGCGCGGGAAGCTGGCCTTGCCTGCGATAATGGCGTACG CGTCGATCTCGATGCCAGAACCTCCGATCCGTCCATCTATGCCTTGGGCGATGTGACCTTGCGTCCGTTGCCGCTTTATC AGGATCGCATGGCCCGTCTCGAAAGCGTGGCCAATGCGCTGGAGCAGGCCAAACAAGCGGCAGCTTCCATTCTCGGCCAG CCACGGCCGGAACCCGTGGTGCCGTGGTTCTGGTCGGATCAATATGACGTCAAATTGCAGATTGCCGGCATGCCCTTCGA CTGCGACGACATGGTGATCCGTGGTGCGATCGACAGCGGCAAATTCGCGATCTTTCATATGCGGGGCGATCACATCCAGG CGGTCGAGGCGGTCAATGCCGCGCCCGAATTCATGGGTGGCCGTCTGCTCATCGCCTCGCAGCAGAAAGTGGATCGGGCA AAGCTTGCCGATCCCACCGTCAGTATCAAGAGGGTGGCGGTTTAG
Upstream 100 bases:
>100_bases TTCGGATAAATCCAAAATGCTCGAGGCAGCACTGATTTTGCTTTGAAACCGAAATCAATCGTCGTTTGAACTACCGAATT GGTTGGGTCGCGAGGGTAAC
Downstream 100 bases:
>100_bases GCAGGCTGAATGGTGTGATCTTCCGCCTGCCTTATGACTTTGTCATTTGGTGCCGTGGGCGGCAGTTTGCGCGAAAAACG AAGCATGATTGGCTCTTCGA
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: oxidized ferredoxin; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MVDQSDPRQTRIVVVGAGHAGGTFVSLMREMGHEGPILVIGEETAAPYQRPPLSKDYLKGNLAEDSLFLRAPSFYEERKI IVRTGESVERIDREEKAIRLAGGDVEPYDVLVLATGSENRRLGVEGADLTNIFGLRTLAEAGLLKQVLRPESRLAVIGGG YVGLEVAASARLLGADVVVIEREPRVLARVACEPLSRFYESHHRAQGVRIETGAQVTGFEGDAGSIAGVRLADARQFACD VAIVGIGAVARDRLAREAGLACDNGVRVDLDARTSDPSIYALGDVTLRPLPLYQDRMARLESVANALEQAKQAAASILGQ PRPEPVVPWFWSDQYDVKLQIAGMPFDCDDMVIRGAIDSGKFAIFHMRGDHIQAVEAVNAAPEFMGGRLLIASQQKVDRA KLADPTVSIKRVAV
Sequences:
>Translated_414_residues MVDQSDPRQTRIVVVGAGHAGGTFVSLMREMGHEGPILVIGEETAAPYQRPPLSKDYLKGNLAEDSLFLRAPSFYEERKI IVRTGESVERIDREEKAIRLAGGDVEPYDVLVLATGSENRRLGVEGADLTNIFGLRTLAEAGLLKQVLRPESRLAVIGGG YVGLEVAASARLLGADVVVIEREPRVLARVACEPLSRFYESHHRAQGVRIETGAQVTGFEGDAGSIAGVRLADARQFACD VAIVGIGAVARDRLAREAGLACDNGVRVDLDARTSDPSIYALGDVTLRPLPLYQDRMARLESVANALEQAKQAAASILGQ PRPEPVVPWFWSDQYDVKLQIAGMPFDCDDMVIRGAIDSGKFAIFHMRGDHIQAVEAVNAAPEFMGGRLLIASQQKVDRA KLADPTVSIKRVAV >Mature_414_residues MVDQSDPRQTRIVVVGAGHAGGTFVSLMREMGHEGPILVIGEETAAPYQRPPLSKDYLKGNLAEDSLFLRAPSFYEERKI IVRTGESVERIDREEKAIRLAGGDVEPYDVLVLATGSENRRLGVEGADLTNIFGLRTLAEAGLLKQVLRPESRLAVIGGG YVGLEVAASARLLGADVVVIEREPRVLARVACEPLSRFYESHHRAQGVRIETGAQVTGFEGDAGSIAGVRLADARQFACD VAIVGIGAVARDRLAREAGLACDNGVRVDLDARTSDPSIYALGDVTLRPLPLYQDRMARLESVANALEQAKQAAASILGQ PRPEPVVPWFWSDQYDVKLQIAGMPFDCDDMVIRGAIDSGKFAIFHMRGDHIQAVEAVNAAPEFMGGRLLIASQQKVDRA KLADPTVSIKRVAV
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21389617, Length=375, Percent_Identity=28.8, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI65787454, Length=375, Percent_Identity=28.8, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI226437568, Length=375, Percent_Identity=28.8, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI22202629, Length=337, Percent_Identity=26.7062314540059, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI4757732, Length=337, Percent_Identity=26.7062314540059, Blast_Score=102, Evalue=5e-22, Organism=Escherichia coli, GI1788892, Length=408, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI1789065, Length=273, Percent_Identity=29.3040293040293, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1789765, Length=321, Percent_Identity=31.7757009345794, Blast_Score=95, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17559934, Length=387, Percent_Identity=29.9741602067183, Blast_Score=174, Evalue=6e-44, Organism=Drosophila melanogaster, GI24639257, Length=412, Percent_Identity=27.4271844660194, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI281359715, Length=412, Percent_Identity=27.4271844660194, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI281359713, Length=412, Percent_Identity=27.4271844660194, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24639250, Length=412, Percent_Identity=27.4271844660194, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI18543267, Length=412, Percent_Identity=27.4271844660194, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24639252, Length=412, Percent_Identity=27.4271844660194, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24585130, Length=403, Percent_Identity=22.3325062034739, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24581020, Length=366, Percent_Identity=23.7704918032787, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI28573993, Length=366, Percent_Identity=23.7704918032787, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3
Molecular weight: Translated: 44743; Mature: 44743
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDQSDPRQTRIVVVGAGHAGGTFVSLMREMGHEGPILVIGEETAAPYQRPPLSKDYLKG CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCC NLAEDSLFLRAPSFYEERKIIVRTGESVERIDREEKAIRLAGGDVEPYDVLVLATGSENR CCCCCCEEEECCCCHHCCEEEEECCCHHHHHCCHHHEEEEECCCCCCEEEEEEEECCCCC RLGVEGADLTNIFGLRTLAEAGLLKQVLRPESRLAVIGGGYVGLEVAASARLLGADVVVI EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEHHCCEEECCEEEEE EREPRVLARVACEPLSRFYESHHRAQGVRIETGAQVTGFEGDAGSIAGVRLADARQFACD ECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCCCEEEEEEECCHHHHEE VAIVGIGAVARDRLAREAGLACDNGVRVDLDARTSDPSIYALGDVTLRPLPLYQDRMARL EEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCEECCCCCHHHHHHHH ESVANALEQAKQAAASILGQPRPEPVVPWFWSDQYDVKLQIAGMPFDCDDMVIRGAIDSG HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEECCCC KFAIFHMRGDHIQAVEAVNAAPEFMGGRLLIASQQKVDRAKLADPTVSIKRVAV CEEEEEECCCCCHHHHHHHCCHHHCCCEEEEECCCHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MVDQSDPRQTRIVVVGAGHAGGTFVSLMREMGHEGPILVIGEETAAPYQRPPLSKDYLKG CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCC NLAEDSLFLRAPSFYEERKIIVRTGESVERIDREEKAIRLAGGDVEPYDVLVLATGSENR CCCCCCEEEECCCCHHCCEEEEECCCHHHHHCCHHHEEEEECCCCCCEEEEEEEECCCCC RLGVEGADLTNIFGLRTLAEAGLLKQVLRPESRLAVIGGGYVGLEVAASARLLGADVVVI EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEHHCCEEECCEEEEE EREPRVLARVACEPLSRFYESHHRAQGVRIETGAQVTGFEGDAGSIAGVRLADARQFACD ECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCCCEEEEEEECCHHHHEE VAIVGIGAVARDRLAREAGLACDNGVRVDLDARTSDPSIYALGDVTLRPLPLYQDRMARL EEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCEECCCCCHHHHHHHH ESVANALEQAKQAAASILGQPRPEPVVPWFWSDQYDVKLQIAGMPFDCDDMVIRGAIDSG HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEECCCC KFAIFHMRGDHIQAVEAVNAAPEFMGGRLLIASQQKVDRAKLADPTVSIKRVAV CEEEEEECCCCCHHHHHHHCCHHHCCCEEEEECCCHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced ferredoxin; NAD+
Specific reaction: reduced ferredoxin + NAD+ = oxidized ferredoxin + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]