| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679755
Identifier: 182679755
GI number: 182679755
Start: 3241692
End: 3242630
Strand: Reverse
Name: 182679755
Synonym: Bind_2843
Alternate gene names: NA
Gene position: 3242630-3241692 (Counterclockwise)
Preceding gene: 182679756
Following gene: 182679754
Centisome position: 77.76
GC content: 63.47
Gene sequence:
>939_bases GTGCCGACCGCCTCGCTTCTCGATCCCGCCCTTCACGGTCTCGGTCCTAGCCAGCAAGACGAGGCTTTGCGCCTGGCTGC CCGCTTCCCTGGCCTGATCGTCGCGGCGCGCGATATTGCCGCGAGTGTCATGCATGGCGTGCATGGACGCCGCAGGCCCG GCACGGGCGAGACCTTTTGGCAATTTCGGCCCTTCACAGTGGGGGAATCGGCTGCCCGCATCGACTGGCGACGCTCCGCG CGCGACCAGAACCTCTATGTGCGCGAACGGGAATGGGAGGCCGCTCACACGATCTATCTCTGGGTCGATCGTAGTGCTTC CATGTATTTCCTTTCGAGCCTCGCCATGCAATCAAAAGTGGATCGCGCCTTGGTGCTGGGCCTTGCCGCAGCCGATCTTC TGGTGGCAGCGGGGGAGAGGGTGGCGCTGCTCGGCCTCACGCGGCCGCTGGCGACGCGCCAGATCGTCGAGCGTCTGGCC GAGGCCTGGCTTCTGGAGGAGAAAGCCCCTGATTATCGGCCTGCGGAATTGCCCGAGGCCATGTCTCTTCCGCGCGGCGC ACAGGCTTTGCTAATTGGTGATTTCCTCTGCGACGTGGCGGATCTCGCCCGTGTCATCGAGCGGCTCAGCGCTCAAGGAG CGAATGGCCATCTCGTTATGATCGCCGATCCGATTGAGGAGACCTTCCCCTTCAAGGGGCATGCGGAATTGATCGATGTC GATTCGCCTGCACGTTTCCGCGTTGGACAGGCAGAGGATTTCGCGCAGGATTATCAGCACAGACTCGCCGCTCATCGCGA CGCCATTGCTGCCCTGACCAGGGCGAAAGGCTGGAGCTTGTCCATCCATCGGACCGATCATCCAGCCTCAGAGGCTCTGC TCGCTTTGCGCATGCGTCTCGAGGCCGGCGGCATGGCCGTGACGGCAAGGGAGGGCTGA
Upstream 100 bases:
>100_bases ATCCTCAAACATCGCATGGCTTTGACTTTTACCGCGCGGGCCGAGGGGCTGACGGTGAGCGATGTGATCGGCAAATTGAT CCAAAGGCTCTCCTGAACCC
Downstream 100 bases:
>100_bases TGTTCGGTTTGCCGCTCGCCTTTACGGTACCAGCCGTGACCTTGGCGCTCGCCGGGCTGCCCATCCTTTATTATCTGTTG CGGGCGACACCGCCCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPTASLLDPALHGLGPSQQDEALRLAARFPGLIVAARDIAASVMHGVHGRRRPGTGETFWQFRPFTVGESAARIDWRRSA RDQNLYVREREWEAAHTIYLWVDRSASMYFLSSLAMQSKVDRALVLGLAAADLLVAAGERVALLGLTRPLATRQIVERLA EAWLLEEKAPDYRPAELPEAMSLPRGAQALLIGDFLCDVADLARVIERLSAQGANGHLVMIADPIEETFPFKGHAELIDV DSPARFRVGQAEDFAQDYQHRLAAHRDAIAALTRAKGWSLSIHRTDHPASEALLALRMRLEAGGMAVTAREG
Sequences:
>Translated_312_residues MPTASLLDPALHGLGPSQQDEALRLAARFPGLIVAARDIAASVMHGVHGRRRPGTGETFWQFRPFTVGESAARIDWRRSA RDQNLYVREREWEAAHTIYLWVDRSASMYFLSSLAMQSKVDRALVLGLAAADLLVAAGERVALLGLTRPLATRQIVERLA EAWLLEEKAPDYRPAELPEAMSLPRGAQALLIGDFLCDVADLARVIERLSAQGANGHLVMIADPIEETFPFKGHAELIDV DSPARFRVGQAEDFAQDYQHRLAAHRDAIAALTRAKGWSLSIHRTDHPASEALLALRMRLEAGGMAVTAREG >Mature_311_residues PTASLLDPALHGLGPSQQDEALRLAARFPGLIVAARDIAASVMHGVHGRRRPGTGETFWQFRPFTVGESAARIDWRRSAR DQNLYVREREWEAAHTIYLWVDRSASMYFLSSLAMQSKVDRALVLGLAAADLLVAAGERVALLGLTRPLATRQIVERLAE AWLLEEKAPDYRPAELPEAMSLPRGAQALLIGDFLCDVADLARVIERLSAQGANGHLVMIADPIEETFPFKGHAELIDVD SPARFRVGQAEDFAQDYQHRLAAHRDAIAALTRAKGWSLSIHRTDHPASEALLALRMRLEAGGMAVTAREG
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34307; Mature: 34175
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTASLLDPALHGLGPSQQDEALRLAARFPGLIVAARDIAASVMHGVHGRRRPGTGETFW CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEE QFRPFTVGESAARIDWRRSARDQNLYVREREWEAAHTIYLWVDRSASMYFLSSLAMQSKV EECCEECCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHH DRALVLGLAAADLLVAAGERVALLGLTRPLATRQIVERLAEAWLLEEKAPDYRPAELPEA HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH MSLPRGAQALLIGDFLCDVADLARVIERLSAQGANGHLVMIADPIEETFPFKGHAELIDV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCEEEEC DSPARFRVGQAEDFAQDYQHRLAAHRDAIAALTRAKGWSLSIHRTDHPASEALLALRMRL CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH EAGGMAVTAREG CCCCEEEEECCC >Mature Secondary Structure PTASLLDPALHGLGPSQQDEALRLAARFPGLIVAARDIAASVMHGVHGRRRPGTGETFW CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEE QFRPFTVGESAARIDWRRSARDQNLYVREREWEAAHTIYLWVDRSASMYFLSSLAMQSKV EECCEECCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHH DRALVLGLAAADLLVAAGERVALLGLTRPLATRQIVERLAEAWLLEEKAPDYRPAELPEA HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH MSLPRGAQALLIGDFLCDVADLARVIERLSAQGANGHLVMIADPIEETFPFKGHAELIDV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCEEEEC DSPARFRVGQAEDFAQDYQHRLAAHRDAIAALTRAKGWSLSIHRTDHPASEALLALRMRL CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH EAGGMAVTAREG CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA