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The map label for this gene is rbsC [H]

Identifier: 182679734

GI number: 182679734

Start: 3215591

End: 3216607

Strand: Reverse

Name: rbsC [H]

Synonym: Bind_2822

Alternate gene names: 182679734

Gene position: 3216607-3215591 (Counterclockwise)

Preceding gene: 182679735

Following gene: 182679733

Centisome position: 77.13

GC content: 59.98

Gene sequence:

>1017_bases
ATGACCGACAATCATCTGGCATATGCACCTGCCGCCTTTCATAAGCCCGTGCGGCGGCTGCCAGCAGGGATGAGCATTCT
GTTCGTGCTCGTCGCCATCGCATTGATCTTCGAAGCTCTGGGCTGGCTCCTGGTTGGGCAGAGCTTTCTGATGAATACCC
AGCGCCTGACCATCATGATCCTTCAGGTTTCGGTCATCGGCATTATCGCGGTGGGCGTCACCCAGGTCATTATCACGGGA
GGCATCGATCTTTCGTCGGGCTCCGTCGTCGCGATGACCGCAATGATCGCAGCGAGCTTCGCTCAATCATCGACCTGGGC
GCGCGCCGTCTATCCTTCTCTGACGGATCTGCCGGCCATCGTGCCGATCGGCATCGGCATCGGTATCGGCCTCATCGCCG
GACTGATCAATGGAATGCTGATCACCTATACGAAGATCCCGCCCTTCATCGCGACGCTCGGCATGATGGTCTCGGCGCGC
GGCGTCGCCCGCTGGTACACGAATGGCCAGCCTGTATCGGGGCTTGAGAAAAGTTTCACGGTGATTGGCTCCGGAATCTG
GCCAGTGGTGATCTTCCTCGTGGTGGCGGCCATCTTCCATGTCGTGCTGCGCTATACGCGCTATGGAAAATTTACCTACG
CCATCGGCGCCAATGTACAGGCGGCGCGTGTCTCCGGCATCAATGTGGAACGCCACCTCATCAAGGTCTATGCGATCGCC
GGGGCGCTGGCTGGCGTTGCCGGCCTCGTGACGGCGGCCCGCGCGCAGACCGCGCAGGCCAATATGGGCATCAATTACGA
ACTTGATGCCATTGCTGCTACCGTCATCGGCGGCACCTCGCTTGTCGGCGGCTCGGGGCGCATTCTGGGGACGATCATCG
GCACGGCCATTCTCGGTGTCATGACTTCCGGCTTCACCTTCCTGCGGGTGGACTCCTATTACCAAGAGATCGTCAAGGGC
GTGATCATCGTCGCCGCCGTCGTCACCGATGTCTACCGGCAGAAGAAACGTCATTGA

Upstream 100 bases:

>100_bases
TCTCGATCGGTCCGAGGCGACCCAGGTAAAGATCATGGAGCTCGCCTCCCGATGACTTTCACATTCCATCGACGTGACAA
GACGATTTGCGAGGACGGAA

Downstream 100 bases:

>100_bases
GCCGGACCACGTGAGGGGACGTCACGATATCGCTTGTAACCACACGAGATTGGAAGTCACTATCATCTGTGTGGTTTGAA
ATCATCCTATATCCGAAGCG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTDNHLAYAPAAFHKPVRRLPAGMSILFVLVAIALIFEALGWLLVGQSFLMNTQRLTIMILQVSVIGIIAVGVTQVIITG
GIDLSSGSVVAMTAMIAASFAQSSTWARAVYPSLTDLPAIVPIGIGIGIGLIAGLINGMLITYTKIPPFIATLGMMVSAR
GVARWYTNGQPVSGLEKSFTVIGSGIWPVVIFLVVAAIFHVVLRYTRYGKFTYAIGANVQAARVSGINVERHLIKVYAIA
GALAGVAGLVTAARAQTAQANMGINYELDAIAATVIGGTSLVGGSGRILGTIIGTAILGVMTSGFTFLRVDSYYQEIVKG
VIIVAAVVTDVYRQKKRH

Sequences:

>Translated_338_residues
MTDNHLAYAPAAFHKPVRRLPAGMSILFVLVAIALIFEALGWLLVGQSFLMNTQRLTIMILQVSVIGIIAVGVTQVIITG
GIDLSSGSVVAMTAMIAASFAQSSTWARAVYPSLTDLPAIVPIGIGIGIGLIAGLINGMLITYTKIPPFIATLGMMVSAR
GVARWYTNGQPVSGLEKSFTVIGSGIWPVVIFLVVAAIFHVVLRYTRYGKFTYAIGANVQAARVSGINVERHLIKVYAIA
GALAGVAGLVTAARAQTAQANMGINYELDAIAATVIGGTSLVGGSGRILGTIIGTAILGVMTSGFTFLRVDSYYQEIVKG
VIIVAAVVTDVYRQKKRH
>Mature_337_residues
TDNHLAYAPAAFHKPVRRLPAGMSILFVLVAIALIFEALGWLLVGQSFLMNTQRLTIMILQVSVIGIIAVGVTQVIITGG
IDLSSGSVVAMTAMIAASFAQSSTWARAVYPSLTDLPAIVPIGIGIGIGLIAGLINGMLITYTKIPPFIATLGMMVSARG
VARWYTNGQPVSGLEKSFTVIGSGIWPVVIFLVVAAIFHVVLRYTRYGKFTYAIGANVQAARVSGINVERHLIKVYAIAG
ALAGVAGLVTAARAQTAQANMGINYELDAIAATVIGGTSLVGGSGRILGTIIGTAILGVMTSGFTFLRVDSYYQEIVKGV
IIVAAVVTDVYRQKKRH

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=285, Percent_Identity=42.4561403508772, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1788471, Length=289, Percent_Identity=38.4083044982699, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790524, Length=310, Percent_Identity=35.1612903225806, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788896, Length=276, Percent_Identity=33.695652173913, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI145693152, Length=319, Percent_Identity=32.9153605015674, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI145693214, Length=256, Percent_Identity=37.890625, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082395, Length=302, Percent_Identity=32.7814569536424, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789992, Length=131, Percent_Identity=43.5114503816794, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787794, Length=308, Percent_Identity=29.2207792207792, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787793, Length=298, Percent_Identity=27.8523489932886, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35537; Mature: 35406

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNHLAYAPAAFHKPVRRLPAGMSILFVLVAIALIFEALGWLLVGQSFLMNTQRLTIMI
CCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQVSVIGIIAVGVTQVIITGGIDLSSGSVVAMTAMIAASFAQSSTWARAVYPSLTDLPAI
HHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHCCCHH
VPIGIGIGIGLIAGLINGMLITYTKIPPFIATLGMMVSARGVARWYTNGQPVSGLEKSFT
HHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHH
VIGSGIWPVVIFLVVAAIFHVVLRYTRYGKFTYAIGANVQAARVSGINVERHLIKVYAIA
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHH
GALAGVAGLVTAARAQTAQANMGINYELDAIAATVIGGTSLVGGSGRILGTIIGTAILGV
HHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHH
MTSGFTFLRVDSYYQEIVKGVIIVAAVVTDVYRQKKRH
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDNHLAYAPAAFHKPVRRLPAGMSILFVLVAIALIFEALGWLLVGQSFLMNTQRLTIMI
CCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQVSVIGIIAVGVTQVIITGGIDLSSGSVVAMTAMIAASFAQSSTWARAVYPSLTDLPAI
HHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHCCCHH
VPIGIGIGIGLIAGLINGMLITYTKIPPFIATLGMMVSARGVARWYTNGQPVSGLEKSFT
HHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHH
VIGSGIWPVVIFLVVAAIFHVVLRYTRYGKFTYAIGANVQAARVSGINVERHLIKVYAIA
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHH
GALAGVAGLVTAARAQTAQANMGINYELDAIAATVIGGTSLVGGSGRILGTIIGTAILGV
HHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHH
MTSGFTFLRVDSYYQEIVKGVIIVAAVVTDVYRQKKRH
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]